Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 1.5e-228 795.8 387 100.0
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 7.2e-175 617.5 372 78.2
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.6e-166 589.7 372 75.0
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.6e-166 589.7 372 75.0
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 1.4e-165 586.6 372 74.2
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 1.2e-161 573.5 374 73.0
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 1.5e-161 573.2 371 72.8
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 1.0e-160 570.5 439 64.9
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 3.8e-160 568.5 371 72.8
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 8.5e-160 567.4 373 73.2
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 1.4e-159 566.6 371 72.0
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 2.5e-159 565.8 371 72.5
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 4.2e-159 565.1 372 72.6
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 8.0e-158 560.8 375 72.3
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 8.0e-158 560.8 384 69.5
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 3.9e-157 558.5 371 70.6
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 6.7e-157 557.8 374 71.1
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 4.4e-156 555.1 375 70.4
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 7.4e-156 554.3 438 64.4
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 9.7e-156 553.9 371 70.1
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 2.8e-155 552.4 372 68.8
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 2.0e-153 546.2 373 69.7
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 4.5e-153 545.0 400 65.0
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 7.7e-153 544.3 389 67.4
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 1.0e-152 543.9 372 68.8
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.3e-152 543.5 372 68.8
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 2.9e-152 542.3 389 67.1
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 1.1e-151 540.4 381 66.9
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 5.5e-151 538.1 373 68.6
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 5.5e-151 538.1 378 68.0
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.2e-150 537.0 373 67.3
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 1.2e-150 537.0 370 70.0
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 6.1e-150 534.6 372 68.0
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 1.4e-149 533.5 372 67.5
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 3.3e-148 528.9 377 67.9
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 6.3e-147 524.6 377 66.8
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 1.4e-146 523.5 372 66.4
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 9.1e-146 520.8 377 66.0
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 3.5e-145 518.8 344 71.8
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 1.0e-144 517.3 389 63.2
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 2.2e-144 516.2 384 64.8
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 3.6e-142 508.8 371 64.7
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 6.1e-142 508.1 396 63.6
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 1.0e-141 507.3 372 63.7
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 3.0e-141 505.8 372 63.2
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 3.0e-141 505.8 372 63.2
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 6.8e-141 504.6 372 63.2
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 1.2e-140 503.8 378 62.7
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.5e-140 503.4 372 62.9
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.5e-140 503.4 372 62.9
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.5e-140 503.4 371 62.8
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 3.4e-140 502.3 371 62.8
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 3.4e-140 502.3 379 62.8
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 5.7e-140 501.5 381 61.4
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 5.7e-140 501.5 373 63.0
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 7.5e-140 501.1 377 62.3
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 3.7e-139 498.8 413 59.8
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.4e-138 496.9 376 64.4
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 1.8e-138 496.5 379 61.2
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 2.4e-138 496.1 371 62.0
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 3.1e-138 495.7 372 62.1
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 3.1e-138 495.7 391 62.1
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 1.3e-136 490.3 374 62.3
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 2.5e-135 486.1 372 62.4
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 9.5e-135 484.2 373 62.5
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 2.8e-134 482.6 385 60.5
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 1.5e-132 476.9 374 61.0
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 7.5e-132 474.6 386 60.4
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 1.3e-131 473.8 403 56.3
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 2.4e-130 469.5 373 59.5
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 3.5e-129 465.7 377 60.2
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.0e-128 464.2 369 59.9
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.9e-127 459.9 369 59.3
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 5.6e-127 458.4 399 55.6
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 1.6e-126 456.8 390 55.9
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 4.7e-126 455.3 369 58.8
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 7.0e-122 441.4 295 69.8
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 8.0e-118 427.9 372 56.7
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 5.8e-116 421.8 374 57.0
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.9e-115 419.5 367 54.5
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 7.0e-114 414.8 335 59.7
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 4.6e-113 412.1 372 55.4
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 1.7e-112 410.2 412 54.1
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.5e-108 397.1 382 49.2
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.9e-107 392.9 372 53.8
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.9e-107 392.9 372 53.8
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 3.1e-101 372.9 469 42.9
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 6.8e-101 371.7 394 46.2
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 7.6e-100 368.2 390 46.4
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 4.2e-98 362.5 296 60.5
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 2.5e-95 353.2 388 46.1
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 1.7e-91 340.5 204 77.9
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 6.2e-86 322.0 392 41.3
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 4.9e-83 312.4 205 69.3
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 9.6e-71 271.6 207 61.4
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 7.2e-58 228.8 137 76.6
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.8e-56 224.2 159 64.2
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 1.7e-54 217.6 135 74.8
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 3.0e-48 196.8 145 67.6
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 1.1e-47 194.9 145 66.9
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 3.3e-47 193.4 145 66.2
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 7.4e-47 192.2 145 66.2
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.7e-46 191.0 123 72.4
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 4.8e-46 189.5 135 63.7
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 7.2e-42 175.6 126 65.1
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 6.1e-41 172.6 135 62.2
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 2.3e-40 170.6 127 67.7
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 1.7e-38 164.5 101 74.3
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 2.0e-36 157.5 152 50.7
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 2.2e-30 137.5 111 59.5
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 2.2e-30 137.5 94 67.0
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 3.7e-30 136.7 88 71.6
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 1.1e-29 135.2 84 73.8
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 2.0e-28 131.0 82 69.5
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 4.5e-28 129.8 95 57.9
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 7.7e-28 129.0 109 52.3
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.2e-26 123.6 88 63.6
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 4.2e-26 123.2 116 56.9
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.3e-22 111.7 75 68.0
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.3e-22 111.7 75 68.0
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 4.1e-21 106.7 61 72.1
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.2e-20 105.1 63 71.4
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 4.5e-20 103.2 59 71.2
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.2e-17 95.1 54 74.1
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.2e-15 88.6 82 51.2
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 5.7e-15 86.3 52 69.2
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 2.2e-14 84.3 172 29.7
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 1.4e-13 81.6 78 56.4
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 1.0e-11 75.5 42 76.2
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 5.0e-11 73.2 42 73.8
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 5.6e-10 69.7 56 55.4
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 9.5e-10 68.9 42 69.0
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 4.7e-09 66.6 102 37.3
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 1.8e-08 64.7 102 36.3
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.3e-08 64.3 38 68.4
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 1.5e-07 61.6 102 35.3
C05p13980 Brassica napus HOM05D000840 ORTHO05D000670 4.9e-06 56.6 40 65.0


User provided reference genes

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