Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0158 Trochodendron aralioides HOM05D000684 ORTHO05D414372 5.7e-46 187.2 93 100.0
TAR629G2071 Trochodendron aralioides HOM05D000684 ORTHO05D000688 2.1e-24 115.5 83 73.5
Nn1g06522 Nelumbo nucifera HOM05D000684 ORTHO05D000688 1.0e-18 96.7 84 61.9
Dinv20174 Davidia involucrata HOM05D000684 ORTHO05D000688 1.6e-16 89.4 81 58.0
Dinv04304 Davidia involucrata HOM05D000084 ORTHO05D000363 1.4e-15 86.3 81 58.0
CiPaw.12G118500 Carya illinoinensis HOM05D000684 ORTHO05D000688 2.0e-14 82.4 81 58.0
QL08p021921 Quercus lobata HOM05D000684 ORTHO05D000688 2.9e-13 78.6 82 57.3
CiPaw.11G169900 Carya illinoinensis HOM05D000684 ORTHO05D000688 3.8e-13 78.2 83 55.4
Haze_09429 Corylus avellana HOM05D000684 ORTHO05D000688 8.4e-13 77.0 81 54.3
Rhsim06G0199300 Rhododendron simsii HOM05D000684 ORTHO05D000688 8.4e-13 77.0 83 54.2
Prupe.4G180900 Prunus persica HOM05D000684 ORTHO05D000688 2.4e-12 75.5 81 53.1
CSS0012938 Camellia sinensis var. sinensis HOM05D000684 ORTHO05D000688 2.7e-11 72.0 80 52.5
Hma1.2p1_0531F.1_g173340 Hydrangea macrophylla HOM05D000684 ORTHO05D000688 3.5e-11 71.6 82 51.2
Actinidia09688 Actinidia chinensis HOM05D000684 ORTHO05D000688 6.0e-11 70.9 83 49.4
vmacro11867 Vaccinium macrocarpon HOM05D000684 ORTHO05D000688 1.3e-10 69.7 83 49.4
MD03G1228100 Malus domestica HOM05D000684 ORTHO05D000688 2.3e-10 68.9 81 50.6
EL10Ac4g08184 Beta vulgaris HOM05D000684 ORTHO05D000688 5.1e-10 67.8 81 49.4
Duzib268G1876 Durio zibethinus HOM05D000684 ORTHO05D000688 5.1e-10 67.8 81 50.6
Cc05_g12010 Coffea canephora HOM05D000684 ORTHO05D000688 1.5e-09 66.2 70 52.9
CSS0027665 Camellia sinensis var. sinensis HOM05D000684 ORTHO05D000688 2.5e-09 65.5 80 48.8
Ciclev10007392m.g Citrus clementina HOM05D000684 ORTHO05D000688 3.3e-09 65.1 81 48.1
Atru.chr2.2603 Acer truncatum HOM05D000684 ORTHO05D000688 1.3e-08 63.2 79 48.1
Actinidia12802 Actinidia chinensis HOM05D000684 ORTHO05D000688 2.1e-08 62.4 75 48.0
PGR031G1852 Punica granatum HOM05D000684 ORTHO05D000688 2.1e-08 62.4 81 46.9
Ah.06g184330 Amaranthus hybridus HOM05D000684 ORTHO05D000688 2.8e-08 62.0 84 42.9
Duzib170G0222 Durio zibethinus HOM05D000684 ORTHO05D000688 2.8e-08 62.0 81 46.9
AUR62039206 Chenopodium quinoa HOM05D000684 ORTHO05D000688 3.6e-08 61.6 81 45.7
MBI06_g42738_MAGBIO Magnolia biondii HOM05D000684 ORTHO05D000688 1.1e-07 60.1 82 47.6
MD11G1247500 Malus domestica HOM05D000684 ORTHO05D000688 1.1e-07 60.1 81 48.1
Thecc.07G089800 Theobroma cacao HOM05D000684 ORTHO05D000688 1.1e-07 60.1 81 46.9
Eucgr.F03314 Eucalyptus grandis HOM05D000684 ORTHO05D000688 6.9e-07 57.4 80 46.2
arahy.Tifrunner.gnm1.ann1.G40GES Arachis hypogaea HOM05D000684 ORTHO05D000688 9.0e-07 57.0 89 42.7
Nn1g04106 Nelumbo nucifera HOM05D000684 ORTHO05D000688 9.0e-07 57.0 81 49.4
arahy.Tifrunner.gnm1.ann1.0E14DC Arachis hypogaea HOM05D000684 ORTHO05D000688 1.5e-06 56.2 89 41.6
FAN25G0411 Fragaria x ananassa HOM05D000684 ORTHO05D000688 1.5e-06 56.2 80 46.2
FvH4_3g19920 Fragaria vesca HOM05D000684 ORTHO05D000688 3.4e-06 55.1 80 45.0
FAN11G2306 Fragaria x ananassa HOM05D000684 ORTHO05D000688 3.4e-06 55.1 80 45.0
RcHm_v2.0_Chr5g0033591 Rosa chinensis HOM05D000684 ORTHO05D000688 3.4e-06 55.1 80 45.0
Lsat_1_v5_gn_7_104161 Lactuca sativa HOM05D000684 ORTHO05D000688 4.4e-06 54.7 76 43.4
FAN16G3354 Fragaria x ananassa HOM05D000684 ORTHO05D000688 9.9e-06 53.5 80 45.0
FAN21G0988 Fragaria x ananassa HOM05D000684 ORTHO05D000688 9.9e-06 53.5 80 45.0
Hma1.2p1_0898F.1_g234420 Hydrangea macrophylla HOM05D000684 ORTHO05D000688 9.9e-06 53.5 81 40.7


User provided reference genes

Program Settings