Gene: Lsat_1_v5_gn_7_104161

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_7_104161
  • Transcript Identifier Lsat_1_v5_gn_7_104161.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_7 : 177031578-177035256 : negative

Gene Family Information

  • ID HOM05D000684
  • #Genes/#Species 835/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_7_104161.v5
  • pacid 38910721

Descriptions

  • Description KOG0265//KOG0316//KOG1332 - U5 snRNP-specific protein-like factor and related proteins // Conserved WD40 repeat-containing protein // Vesicle coat complex COPII, subunit SEC13
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
InterProprotein phosphorylation
GO:0009640
IEA
InterProphotomorphogenesis
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT1G53090

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004672
IEA
InterProprotein kinase activity
GO:0005524
IEA
InterProATP binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G53090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR000719 Protein kinase domain
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR011009 Protein kinase-like domain superfamily
IPR044630 WD-repeat protein SPA1/2/3/4
Mapman id Description
19.2.2.8.3.4.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.COP1-SPA substrate adaptor subcomplex.regulator component SPA
26.1.1.3.2 External stimuli response.light.red/far red light.substrate adaptor module of CUL4-DDB1 ubiquitin ligase complex.regulator component SPA