Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1431 Trochodendron aralioides HOM05D004814 ORTHO05D005778 3.9e-108 394.8 202 100.0
TAR629G3287 Trochodendron aralioides HOM05D004814 ORTHO05D005778 7.0e-89 330.9 202 84.7
Nn1g03216 Nelumbo nucifera HOM05D004814 ORTHO05D005778 1.3e-79 300.1 202 77.7
PSO541G0969 Papaver somniferum HOM05D004814 ORTHO05D005778 3.3e-78 295.4 202 73.8
Dinv40842 Davidia involucrata HOM05D004814 ORTHO05D005778 2.8e-77 292.4 207 76.8
PSO675G8482 Papaver somniferum HOM05D004814 ORTHO05D005778 8.0e-77 290.8 202 73.3
Hma1.2p1_0889F.1_g232870 Hydrangea macrophylla HOM05D004814 ORTHO05D005778 8.3e-74 280.8 217 72.8
Dinv10318 Davidia involucrata HOM05D004814 ORTHO05D005778 4.1e-73 278.5 206 74.3
ClCG09G021040 Citrullus lanatus HOM05D004814 ORTHO05D005778 1.1e-70 270.4 207 72.9
Cfa020215 Carpinus fangiana HOM05D004814 ORTHO05D005778 1.5e-70 270.0 206 71.8
CsaV3_7G018640 Cucumis sativus L. HOM05D004814 ORTHO05D005778 1.9e-70 269.6 207 72.5
MELO3C024899.2 Cucumis melo HOM05D004814 ORTHO05D005778 3.3e-70 268.9 207 72.5
CANSAT11G0174 Cannabis sativa HOM05D004814 ORTHO05D005778 5.6e-70 268.1 207 72.9
CiPaw.12G136400 Carya illinoinensis HOM05D004814 ORTHO05D005778 7.3e-70 267.7 206 72.8
QL08p004842 Quercus lobata HOM05D004814 ORTHO05D005778 3.6e-69 265.4 206 73.3
Manes.03G139872 Manihot esculenta HOM05D004814 ORTHO05D005778 8.0e-69 264.2 211 69.7
Potri.001G365600 Populus trichocarpa HOM05D004814 ORTHO05D005778 1.0e-68 263.8 203 68.0
Potri.011G092800 Populus trichocarpa HOM05D004814 ORTHO05D005778 1.4e-68 263.5 184 73.9
Aqoxy4G02247 Aquilegia oxysepala HOM05D004814 ORTHO05D005778 2.3e-68 262.7 203 72.9
Sed0017349 Sechium edule HOM05D004814 ORTHO05D005778 4.0e-68 261.9 201 70.6
Sabra11G0087000 Salix brachista HOM05D004814 ORTHO05D005778 5.2e-68 261.5 209 68.4
CSS0025876 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 8.9e-68 260.8 209 70.3
GSVIVG01014640001 Vitis vinifera HOM05D004814 ORTHO05D005778 2.6e-67 259.2 207 71.0
Actinidia30418 Actinidia chinensis HOM05D004814 ORTHO05D005778 4.4e-67 258.5 207 71.5
MD03G1187000 Malus domestica HOM05D004814 ORTHO05D005778 7.5e-67 257.7 208 71.2
Manes.15G061900 Manihot esculenta HOM05D004814 ORTHO05D005778 9.8e-67 257.3 213 66.2
Actinidia05019 Actinidia chinensis HOM05D004814 ORTHO05D005778 1.3e-66 256.9 207 71.0
arahy.Tifrunner.gnm1.ann1.CWZH2K Arachis hypogaea HOM05D004814 ORTHO05D005778 3.7e-66 255.4 207 69.6
arahy.Tifrunner.gnm1.ann1.0CA1AM Arachis hypogaea HOM05D004814 ORTHO05D005778 1.1e-65 253.8 207 69.6
arahy.Tifrunner.gnm1.ann1.X98J9H Arachis hypogaea HOM05D004814 ORTHO05D005778 1.1e-65 253.8 201 69.7
TWI39G1010 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 3.2e-65 252.3 212 68.4
Sabra16G0239200 Salix brachista HOM05D004814 ORTHO05D005778 2.0e-64 249.6 211 65.4
PGSC0003DMG400014378 Solanum tuberosum HOM05D004814 ORTHO05D005778 2.7e-64 249.2 205 65.9
arahy.Tifrunner.gnm1.ann1.RG8M6K Arachis hypogaea HOM05D004814 ORTHO05D005778 3.5e-64 248.8 207 68.6
DCAR_013223 Daucus carota HOM05D004814 ORTHO05D005778 1.3e-63 246.9 199 69.8
Oeu057089.1 Olea europaea HOM05D004814 ORTHO05D005778 1.3e-63 246.9 207 67.1
TWI38G0785 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 1.3e-63 246.9 213 65.3
CAN.G492.31 Capsicum annuum HOM05D004814 ORTHO05D005778 1.7e-63 246.5 205 64.9
FAN25G3790 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.7e-63 246.5 206 69.9
Sopen10g001990 Solanum pennellii HOM05D004814 ORTHO05D005778 2.3e-63 246.1 205 65.4
Lalb_Chr05g0211691 Lupinus albus HOM05D004814 ORTHO05D005778 3.9e-63 245.4 209 65.1
FvH4_3g29500 Fragaria vesca HOM05D004814 ORTHO05D005778 6.6e-63 244.6 208 69.7
FAN11G3417 Fragaria x ananassa HOM05D004814 ORTHO05D005778 6.6e-63 244.6 208 69.7
EL10Ac4g07605 Beta vulgaris HOM05D004814 ORTHO05D005778 8.6e-63 244.2 210 66.2
Glyma.18G079900 Glycine max HOM05D004814 ORTHO05D005778 8.6e-63 244.2 205 67.3
RcHm_v2.0_Chr5g0054381 Rosa chinensis HOM05D004814 ORTHO05D005778 8.6e-63 244.2 209 69.4
vmacro22713 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 1.1e-62 243.8 206 65.5
FAN16G2593 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.9e-62 243.0 208 69.2
FAN21G1289 Fragaria x ananassa HOM05D004814 ORTHO05D005778 3.3e-62 242.3 208 69.2
Solyc10g006030.3 Solanum lycopersicum HOM05D004814 ORTHO05D005778 3.3e-62 242.3 205 64.9
Sc16g0007970 Simmondsia chinensis HOM05D004814 ORTHO05D005778 5.6e-62 241.5 208 64.9
Thecc.07G016800 Theobroma cacao HOM05D004814 ORTHO05D005778 5.6e-62 241.5 211 66.8
Ca_20138_v3 Cicer arietinum L. HOM05D004814 ORTHO05D005778 7.3e-62 241.1 208 67.3
Rhsim06G0227300 Rhododendron simsii HOM05D004814 ORTHO05D005778 7.3e-62 241.1 206 63.6
Gohir.A11G276900 Gossypium hirsutum HOM05D004814 ORTHO05D005778 9.5e-62 240.7 210 67.1
Glyma.08G327500 Glycine max HOM05D004814 ORTHO05D005778 2.1e-61 239.6 208 66.8
Nitab4.5_0003491g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 2.8e-61 239.2 207 63.3
Nitab4.5_0006756g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 2.8e-61 239.2 207 63.3
Gohir.D11G287000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 3.6e-61 238.8 210 67.1
Gorai.007G310400 Gossypium raimondii HOM05D004814 ORTHO05D005778 3.6e-61 238.8 210 67.1
Oeu049351.1 Olea europaea HOM05D004814 ORTHO05D005778 3.6e-61 238.8 207 66.2
Cc05_g14790 Coffea canephora HOM05D004814 ORTHO05D005778 4.7e-61 238.4 203 63.5
Haze_09803 Corylus avellana HOM05D004814 ORTHO05D005778 4.7e-61 238.4 206 68.0
Hund01909 Selenicereus undatus HOM05D004814 ORTHO05D005778 4.0e-60 235.3 206 64.1
Phvul.006G055300 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 1.5e-59 233.4 208 64.4
Prupe.4G239600 Prunus persica HOM05D004814 ORTHO05D005778 2.0e-59 233.0 208 66.8
COL.COLO4_09806 Corchorus olitorius HOM05D004814 ORTHO05D005778 2.6e-59 232.6 205 67.8
Phvul.001G030600 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 3.4e-59 232.3 206 64.1
Gohir.D01G075300 Gossypium hirsutum HOM05D004814 ORTHO05D005778 4.4e-59 231.9 203 69.5
Gorai.002G098500 Gossypium raimondii HOM05D004814 ORTHO05D005778 4.4e-59 231.9 203 69.5
MD11G1202000 Malus domestica HOM05D004814 ORTHO05D005778 4.4e-59 231.9 208 65.9
TPR.G30737 Trifolium pratense HOM05D004814 ORTHO05D005778 4.4e-59 231.9 205 65.4
BcaB06g25486 Brassica carinata HOM05D004814 ORTHO05D005778 5.8e-59 231.5 205 65.4
A05p36420 Brassica napus HOM05D004814 ORTHO05D005778 5.8e-59 231.5 209 65.1
Gohir.A01G090000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 5.8e-59 231.5 203 69.0
Thhalv10021566m.g Eutrema salsugineum HOM05D004814 ORTHO05D005778 1.3e-58 230.3 210 64.3
Atru.chr2.3664 Acer truncatum HOM05D004814 ORTHO05D005778 1.7e-58 229.9 210 64.3
Ah.04g166490 Amaranthus hybridus HOM05D004814 ORTHO05D005778 1.7e-58 229.9 207 65.7
Aa31LG8G330 Aethionema arabicum HOM05D004814 ORTHO05D005778 3.7e-58 228.8 213 64.3
AUR62017069 Chenopodium quinoa HOM05D004814 ORTHO05D005778 3.7e-58 228.8 214 65.9
Lsat_1_v5_gn_9_90400 Lactuca sativa HOM05D004814 ORTHO05D005778 3.7e-58 228.8 205 64.9
AUR62036421 Chenopodium quinoa HOM05D004814 ORTHO05D005778 4.9e-58 228.4 210 65.2
AUR62036427 Chenopodium quinoa HOM05D004814 ORTHO05D005778 4.9e-58 228.4 210 65.2
AUR62040646 Chenopodium quinoa HOM05D004814 ORTHO05D005778 4.9e-58 228.4 210 65.2
Ah.06g181280 Amaranthus hybridus HOM05D004814 ORTHO05D005778 6.4e-58 228.0 206 65.0
Eucgr.F03697 Eucalyptus grandis HOM05D004814 ORTHO05D005778 8.3e-58 227.6 210 65.7
Sp3g11290 Schrenkiella parvula HOM05D004814 ORTHO05D005778 8.3e-58 227.6 212 64.2
BraA03t12957Z Brassica rapa HOM05D004814 ORTHO05D005778 1.1e-57 227.3 209 64.1
Duzib213G0234 Durio zibethinus HOM05D004814 ORTHO05D005778 1.9e-57 226.5 209 65.6
AL3G24860 Arabidopsis lyrata HOM05D004814 ORTHO05D005778 2.4e-57 226.1 211 64.5
AT3G13120 Arabidopsis thaliana HOM05D004814 ORTHO05D005778 2.4e-57 226.1 211 64.5
BcaC05g29209 Brassica carinata HOM05D004814 ORTHO05D005778 2.4e-57 226.1 213 63.8
BcaNung05270 Brassica carinata HOM05D004814 ORTHO05D005778 2.4e-57 226.1 211 64.0
A03p38040 Brassica napus HOM05D004814 ORTHO05D005778 2.4e-57 226.1 209 64.6
C05p54820 Brassica napus HOM05D004814 ORTHO05D005778 2.4e-57 226.1 213 63.8
BolC5t34154H Brassica oleracea HOM05D004814 ORTHO05D005778 2.4e-57 226.1 213 63.8
THA.LOC104822735 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 2.4e-57 226.1 208 65.4
C03p46130 Brassica napus HOM05D004814 ORTHO05D005778 3.2e-57 225.7 198 67.2
BraA05t22442Z Brassica rapa HOM05D004814 ORTHO05D005778 3.2e-57 225.7 208 62.5
CARHR087710 Cardamine hirsuta HOM05D004814 ORTHO05D005778 3.2e-57 225.7 206 65.5
BcaC01g04010 Brassica carinata HOM05D004814 ORTHO05D005778 4.1e-57 225.3 198 66.7
BolC3t16886H Brassica oleracea HOM05D004814 ORTHO05D005778 4.1e-57 225.3 198 66.7
Psat5g170120 Pisum sativum HOM05D004814 ORTHO05D005778 4.1e-57 225.3 206 63.1
HanXRQChr13g0408121 Helianthus annuus HOM05D004814 ORTHO05D005778 5.4e-57 224.9 207 65.2
THA.LOC104810287 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 9.2e-57 224.2 210 65.2
Ciclev10009615m.g Citrus clementina HOM05D004814 ORTHO05D005778 1.2e-56 223.8 210 64.3
MSTRG.14478 Avicennia marina HOM05D004814 ORTHO05D005778 1.6e-56 223.4 203 63.1
THA.LOC104815700 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 2.1e-56 223.0 214 64.5
Aa31LG10G250 Aethionema arabicum HOM05D004814 ORTHO05D005778 2.7e-56 222.6 208 62.5
PGR031G1774 Punica granatum HOM05D004814 ORTHO05D005778 3.5e-56 222.2 209 63.6
Carub.0003s1246 Capsella rubella HOM05D004814 ORTHO05D005778 4.6e-56 221.9 172 70.9
unitig_62.g23297 Utricularia gibba HOM05D004814 ORTHO05D005778 7.8e-56 221.1 200 62.5
ECA240G4731 Erigeron canadensis HOM05D001580 ORTHO05D001517 1.0e-55 220.7 165 71.5
HanXRQChr03g0061321 Helianthus annuus HOM05D004814 ORTHO05D005778 1.3e-55 220.3 211 64.9
PSO832G2117 Papaver somniferum HOM05D004814 ORTHO05D005778 2.3e-55 219.5 203 62.1
A01p40420 Brassica napus HOM05D004814 ORTHO05D005778 5.1e-55 218.4 198 63.6
BraA01t04077Z Brassica rapa HOM05D004814 ORTHO05D005778 5.1e-55 218.4 198 63.6
HPP92_020399 Vanilla planifolia HOM05D004814 ORTHO05D005778 5.1e-55 218.4 199 64.3
Peaxi162Scf00900g00010 Petunia axillaris HOM05D004814 ORTHO05D005778 8.6e-55 217.6 180 67.8
Actinidia05024 Actinidia chinensis HOM05D004814 ORTHO05D005778 1.9e-54 216.5 205 62.4
CSS0019029 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 3.3e-54 215.7 124 86.3
Medtr3g058430 Medicago truncatula HOM05D004814 ORTHO05D005778 2.1e-53 213.0 205 61.5
SGA_v2.0_scaffold8G04398 Striga asiatica HOM05D004814 ORTHO05D005778 2.1e-53 213.0 199 60.8
CDE10G1086 Ceratophyllum demersum HOM05D004814 ORTHO05D005778 6.2e-53 211.5 111 92.8
A01p40680 Brassica napus HOM05D004814 ORTHO05D005778 2.3e-52 209.5 118 87.3
Os03g0196800 Oryza sativa ssp. japonica HOM05D004814 ORTHO05D005778 4.0e-52 208.8 198 59.1
Lj1P888T30 Lonicera japonica HOM05D004814 ORTHO05D005778 6.8e-52 208.0 103 98.1
Cpa.g.sc12.175 Carica papaya HOM05D004814 ORTHO05D005778 2.6e-51 206.1 103 97.1
Zm00001eb401060 Zea mays HOM05D004814 ORTHO05D005778 2.6e-51 206.1 203 58.1
VMungo0248G0001 Vigna mungo HOM05D004814 ORTHO05D005778 4.4e-51 205.3 103 95.1
Zm00001eb008100 Zea mays HOM05D004814 ORTHO05D005778 4.4e-51 205.3 200 61.5
ATR0624G087 Amborella trichopoda HOM05D004814 ORTHO05D005778 5.8e-51 204.9 103 96.1
QL05p065674 Quercus lobata HOM05D004814 ORTHO05D005778 7.1e-49 198.0 110 89.1
BraA01t04102Z Brassica rapa HOM05D004814 ORTHO05D005778 9.2e-49 197.6 103 92.2
C01p51960 Brassica napus HOM05D004814 ORTHO05D005778 1.6e-48 196.8 147 69.4
QL05p065593 Quercus lobata HOM05D004814 ORTHO05D005778 1.6e-45 186.8 102 91.2
MBI19_g45743_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D005778 2.8e-45 186.0 99 88.9
AagrBONN_evm.TU.Sc2ySwM_117.1321 Anthoceros agrestis HOM05D004814 ORTHO05D005778 5.8e-43 178.3 125 70.4
Pp3c20_8830 Physcomitrium patens HOM05D004814 ORTHO05D005778 8.4e-42 174.5 185 54.6
Mapoly0009s0107 Marchantia polymorpha HOM05D004814 ORTHO05D005778 3.2e-41 172.6 115 72.2
Pp3c24_19230 Physcomitrium patens HOM05D004814 ORTHO05D005778 5.4e-41 171.8 124 68.5
Pp3c8_18990 Physcomitrium patens HOM05D004814 ORTHO05D005778 4.6e-40 168.7 177 53.7
SEGI_32296 Sequoiadendron giganteum HOM05D004814 ORTHO05D005778 1.4e-36 157.1 101 74.3
MSTRG.13015 Avicennia marina HOM05D004814 ORTHO05D005778 3.1e-36 156.0 156 55.1
CBR_g19640 Chara braunii HOM05D004814 ORTHO05D005778 6.9e-36 154.8 103 68.0
SMO228G0012 Selaginella moellendorffii HOM05D004814 ORTHO05D005778 6.0e-32 141.7 105 62.9
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 2.8e-29 132.9 99 63.6
PRCOL_00000430 Prasinoderma coloniale HOM05D004814 ORTHO05D005778 8.7e-23 111.3 100 51.0
Cre03.g195650 Chlamydomonas reinhardtii HOM05D004814 ORTHO05D005778 1.4e-20 104.0 103 48.5
MBI19_g09202_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D244005 2.1e-16 90.1 100 54.0
vmacro17432 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 9.0e-12 74.7 206 32.5
RcHm_v2.0_Chr4g0438311 Rosa chinensis HOM05D001946 ORTHO05D002111 5.1e-07 58.9 113 33.6
PGR142G2751 Punica granatum HOM05D001946 ORTHO05D002111 2.5e-06 56.6 108 32.4
FvH4_4g30020 Fragaria vesca HOM05D001946 ORTHO05D002111 5.7e-06 55.5 113 31.9
FAN12G4109 Fragaria x ananassa HOM05D001946 ORTHO05D002111 5.7e-06 55.5 113 31.9


User provided reference genes

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