Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1412 Trochodendron aralioides HOM05D004156 ORTHO05D005259 6.9e-30 133.7 85 100.0
Nn8g39422 Nelumbo nucifera HOM05D004156 ORTHO05D005259 5.7e-16 87.4 99 56.6
TAR625G0545 Trochodendron aralioides HOM05D004156 ORTHO05D005259 1.3e-15 86.3 107 54.2
Hma1.2p1_0018F.1_g012530 Hydrangea macrophylla HOM05D004156 ORTHO05D005259 3.7e-15 84.7 107 54.2
ClCG03G013780 Citrullus lanatus HOM05D004156 ORTHO05D005259 6.3e-15 84.0 107 52.3
Dinv36535 Davidia involucrata HOM05D004156 ORTHO05D003047 8.2e-15 83.6 107 52.3
Ca_00137_v3 Cicer arietinum L. HOM05D004156 ORTHO05D000741 3.1e-14 81.6 68 66.2
Actinidia26780 Actinidia chinensis HOM05D004156 ORTHO05D005259 4.1e-14 81.3 106 51.9
Actinidia37158 Actinidia chinensis HOM05D004156 ORTHO05D005259 4.1e-14 81.3 106 51.9
Nitab4.5_0002556g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 1.5e-13 79.3 90 57.8
GSVIVG01027422001 Vitis vinifera HOM05D004156 ORTHO05D005259 7.7e-13 77.0 100 49.0
Sed0019954 Sechium edule HOM05D004156 ORTHO05D005259 1.3e-12 76.3 107 48.6
CsaV3_1G042300 Cucumis sativus L. HOM05D004156 ORTHO05D005259 2.2e-12 75.5 107 50.5
HanXRQChr06g0181321 Helianthus annuus HOM05D004156 ORTHO05D005259 2.2e-12 75.5 107 50.5
Gohir.D07G039500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.9e-12 75.1 110 47.3
Gorai.001G041600 Gossypium raimondii HOM05D004156 ORTHO05D005259 2.9e-12 75.1 110 47.3
Prupe.7G241100 Prunus persica HOM05D004156 ORTHO05D005259 2.9e-12 75.1 107 45.8
GSVIVG01027072001 Vitis vinifera HOM05D004156 ORTHO05D005259 3.8e-12 74.7 107 46.7
Cc06_g08630 Coffea canephora HOM05D004156 ORTHO05D005259 6.5e-12 73.9 107 46.7
HanXRQChr07g0187411 Helianthus annuus HOM05D004156 ORTHO05D005259 6.5e-12 73.9 106 50.0
Gohir.A07G035500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 8.5e-12 73.6 110 46.4
VMungo1309G1108 Vigna mungo HOM05D004156 ORTHO05D005259 8.5e-12 73.6 104 46.2
Nitab4.5_0005139g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 1.1e-11 73.2 106 49.1
Nitab4.5_0010819g0030 Nicotiana tabacum HOM05D004156 ORTHO05D005259 1.1e-11 73.2 106 49.1
Phvul.009G258100 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 1.4e-11 72.8 104 46.2
Thecc.09G124800 Theobroma cacao HOM05D004156 ORTHO05D005259 1.9e-11 72.4 110 46.4
Phvul.003G163900 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 2.5e-11 72.0 104 46.2
CiPaw.07G232300 Carya illinoinensis HOM05D004156 ORTHO05D005259 4.2e-11 71.2 108 46.3
Gorai.009G018400 Gossypium raimondii HOM05D004156 ORTHO05D005259 5.5e-11 70.9 110 45.5
CANSAT11G1878 Cannabis sativa HOM05D004156 ORTHO05D005259 1.2e-10 69.7 105 45.7
Haze_24995 Corylus avellana HOM05D004156 ORTHO05D005259 1.2e-10 69.7 102 46.1
Cfa002719 Carpinus fangiana HOM05D004156 ORTHO05D005259 1.6e-10 69.3 102 46.1
Gohir.D08G025232 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.1e-10 68.9 114 44.7
MD02G1034000 Malus domestica HOM05D004156 ORTHO05D005259 2.1e-10 68.9 107 45.8
MD15G1174800 Malus domestica HOM05D004156 ORTHO05D005259 2.1e-10 68.9 107 45.8
Sed0021765 Sechium edule HOM05D004156 ORTHO05D005259 2.7e-10 68.6 108 46.3
Solyc12g006550.2 Solanum lycopersicum HOM05D004156 ORTHO05D005259 2.7e-10 68.6 106 45.3
Sopen12g002500 Solanum pennellii HOM05D004156 ORTHO05D005259 2.7e-10 68.6 106 45.3
Gohir.A05G017100 Gossypium hirsutum HOM05D004156 ORTHO05D005259 3.6e-10 68.2 110 44.5
Lsat_1_v5_gn_9_120581 Lactuca sativa HOM05D004156 ORTHO05D005259 6.1e-10 67.4 109 47.7
Peaxi162Scf00274g00336 Petunia axillaris HOM05D004156 ORTHO05D005259 6.1e-10 67.4 98 46.9
VMungo1215G1862 Vigna mungo HOM05D004156 ORTHO05D005259 6.1e-10 67.4 104 44.2
Duzib150G1332 Durio zibethinus HOM05D004156 ORTHO05D005259 7.9e-10 67.0 110 45.5
FvH4_1g03500 Fragaria vesca HOM05D004156 ORTHO05D005259 7.9e-10 67.0 105 43.8
FAN19G1880 Fragaria x ananassa HOM05D004156 ORTHO05D005259 7.9e-10 67.0 105 43.8
FAN23G0721 Fragaria x ananassa HOM05D004156 ORTHO05D005259 7.9e-10 67.0 105 43.8
FAN26G1774 Fragaria x ananassa HOM05D004156 ORTHO05D005259 7.9e-10 67.0 105 43.8
FAN28G2743 Fragaria x ananassa HOM05D004156 ORTHO05D005259 7.9e-10 67.0 105 43.8
PGSC0003DMG400018964 Solanum tuberosum HOM05D004156 ORTHO05D005259 7.9e-10 67.0 106 45.3
DCAR_017823 Daucus carota HOM05D004156 ORTHO05D005259 1.0e-09 66.6 110 45.5
Oeu045226.1 Olea europaea HOM05D004156 ORTHO05D005259 1.4e-09 66.2 107 43.0
CiPaw.15G031800 Carya illinoinensis HOM05D004156 ORTHO05D005259 3.0e-09 65.1 96 46.9
ECA247G0053 Erigeron canadensis HOM05D004156 ORTHO05D005259 3.0e-09 65.1 107 43.9
Lj4g0019515 Lotus japonicus HOM05D004156 ORTHO05D005259 3.0e-09 65.1 104 44.2
Lj7C630T1 Lonicera japonica HOM05D004156 ORTHO05D005259 3.9e-09 64.7 113 45.1
Glyma.13G167900 Glycine max HOM05D004156 ORTHO05D005259 5.1e-09 64.3 107 43.9
Oeu055874.1 Olea europaea HOM05D004156 ORTHO05D005259 1.1e-08 63.2 107 43.9
PGR102G0554 Punica granatum HOM05D004156 ORTHO05D005259 1.1e-08 63.2 105 44.8
C04p09670 Brassica napus HOM05D004156 ORTHO05D005259 1.5e-08 62.8 66 57.6
CAN.G594.20 Capsicum annuum HOM05D004156 ORTHO05D005259 1.5e-08 62.8 102 44.1
Eucgr.E02428 Eucalyptus grandis HOM05D004156 ORTHO05D005259 1.5e-08 62.8 105 42.9
Glyma.17G115500 Glycine max HOM05D004156 ORTHO05D005259 1.5e-08 62.8 106 43.4
vmacro22115 Vaccinium macrocarpon HOM05D004156 ORTHO05D005259 1.5e-08 62.8 116 44.8
ClCG06G011000 Citrullus lanatus HOM05D004156 ORTHO05D005259 1.9e-08 62.4 108 43.5
arahy.Tifrunner.gnm1.ann1.KP5LKI Arachis hypogaea HOM05D004156 ORTHO05D005259 2.5e-08 62.0 104 43.3
Psat2g006920 Pisum sativum HOM05D004156 ORTHO05D005259 2.5e-08 62.0 104 43.3
SalBow5G0058 Salvia bowleyana HOM05D004156 ORTHO05D005259 2.5e-08 62.0 106 41.5
Actinidia35394 Actinidia chinensis HOM05D004156 ORTHO05D005259 4.3e-08 61.2 92 44.6
TPR.G25243 Trifolium pratense HOM05D004156 ORTHO05D005259 4.3e-08 61.2 107 40.2
Zm00001eb122260 Zea mays HOM05D004156 ORTHO05D005259 9.7e-08 60.1 107 40.2
SGA_v2.0_scaffold224G42948 Striga asiatica HOM05D004156 ORTHO05D005259 1.3e-07 59.7 108 44.4
ATR0730G095 Amborella trichopoda HOM05D004156 ORTHO05D005259 1.7e-07 59.3 108 42.6
Medtr2g008870 Medicago truncatula HOM05D004156 ORTHO05D005259 1.7e-07 59.3 103 41.7
PSO210G0875 Papaver somniferum HOM05D004156 ORTHO05D005259 2.2e-07 58.9 109 42.2
arahy.Tifrunner.gnm1.ann1.FDU8BE Arachis hypogaea HOM05D004156 ORTHO05D005259 2.8e-07 58.5 101 41.6
MBI01_g37801_MAGBIO Magnolia biondii HOM05D004156 ORTHO05D005259 3.7e-07 58.2 103 42.7
Potri.005G231000 Populus trichocarpa HOM05D004156 ORTHO05D005259 3.7e-07 58.2 91 42.9
MSTRG.12622 Avicennia marina HOM05D004156 ORTHO05D005259 4.8e-07 57.8 102 42.2
PSO832G0272 Papaver somniferum HOM05D004156 ORTHO05D005259 6.3e-07 57.4 109 41.3
Aqoxy2G02204 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 8.2e-07 57.0 84 44.0
Aqoxy6G01405 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 8.2e-07 57.0 84 44.0
Sabra05G0178400 Salix brachista HOM05D004156 ORTHO05D000382 8.2e-07 57.0 116 39.7
Zm00001eb337040 Zea mays HOM05D004156 ORTHO05D005259 1.4e-06 56.2 100 41.0
Ciclev10008881m.g Citrus clementina HOM05D004156 ORTHO05D005259 1.8e-06 55.8 105 41.0
COL.COLO4_05789 Corchorus olitorius HOM05D004156 ORTHO05D005259 2.4e-06 55.5 111 40.5
Rhsim03G0247600 Rhododendron simsii HOM05D004156 ORTHO05D005259 3.1e-06 55.1 112 42.9
HPP92_015694 Vanilla planifolia HOM05D004156 ORTHO05D005259 3.1e-06 55.1 107 39.3
MELO3C015663.2 Cucumis melo HOM05D004156 ORTHO05D005259 6.9e-06 53.9 107 40.2


User provided reference genes

Program Settings