Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 1.8e-119 432.6 209 100.0
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 2.0e-110 402.5 209 92.3
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 9.1e-108 393.7 209 89.5
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 1.2e-107 393.3 209 90.0
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 1.5e-107 392.9 209 88.5
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 2.0e-107 392.5 209 90.0
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.6e-107 392.1 209 89.5
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 3.5e-107 391.7 209 89.5
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 2.9e-106 388.7 209 89.0
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.9e-106 388.7 209 89.0
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 2.9e-106 388.7 209 88.5
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 5.0e-106 387.9 209 91.4
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 1.9e-105 386.0 209 88.0
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 3.2e-105 385.2 209 88.0
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 3.2e-105 385.2 209 88.0
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 5.5e-105 384.4 209 87.1
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 7.2e-105 384.0 209 85.6
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 9.4e-105 383.6 209 87.1
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 1.2e-104 383.3 209 85.6
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 87.1
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 87.1
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 86.1
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 87.1
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 88.5
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 86.6
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 2.7e-104 382.1 209 87.6
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 2.7e-104 382.1 209 87.1
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 2.7e-104 382.1 209 87.1
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 2.7e-104 382.1 209 87.6
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 6.1e-104 380.9 209 86.6
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 6.1e-104 380.9 209 86.6
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 1.0e-103 380.2 209 84.7
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 1.4e-103 379.8 209 85.2
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 85.6
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 85.2
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 3.9e-103 378.3 209 86.1
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 5.2e-103 377.9 209 87.1
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 5.2e-103 377.9 209 85.6
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 5.2e-103 377.9 209 84.7
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 1.1e-102 376.7 209 85.2
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.1e-102 376.7 209 85.2
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 86.1
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 2.6e-102 375.6 209 85.6
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 2.6e-102 375.6 209 85.2
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 86.1
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 85.2
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 85.2
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 4.4e-102 374.8 209 85.6
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 86.1
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 86.1
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 85.6
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 85.6
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 9.7e-102 373.6 209 85.2
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 9.7e-102 373.6 209 84.7
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 85.2
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 85.6
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 1.7e-101 372.9 209 83.3
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 1.7e-101 372.9 209 85.2
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 3.7e-101 371.7 209 85.2
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 4.8e-101 371.3 209 85.2
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 84.2
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 8.2e-101 370.5 210 84.8
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 84.2
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 85.2
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 1.8e-100 369.4 209 83.7
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 84.2
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 83.3
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 7.0e-100 367.5 209 84.7
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 7.0e-100 367.5 221 82.4
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 84.2
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 5.9e-99 364.4 209 82.3
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 5.9e-99 364.4 208 81.7
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 7.7e-99 364.0 209 82.3
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 7.7e-99 364.0 208 82.7
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 1.0e-98 363.6 209 82.3
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 1.0e-98 363.6 209 82.3
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 3.8e-98 361.7 225 78.7
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 5.0e-98 361.3 230 79.1
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 1.1e-97 360.1 209 81.8
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 1.5e-97 359.8 209 82.8
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.9e-97 359.4 230 78.7
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.2e-96 356.7 240 75.8
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 2.3e-95 352.4 209 79.9
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 3.0e-95 352.1 243 72.8
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 8.8e-95 350.5 191 88.5
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 1.5e-94 349.7 209 79.4
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 1.3e-93 346.7 190 86.8
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 1.1e-92 343.6 187 87.7
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.8e-92 342.8 187 86.6
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 9.1e-92 340.5 288 63.5
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 1.2e-91 340.1 189 84.1
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 2.7e-91 339.0 193 83.4
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 4.5e-91 338.2 209 77.5
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 5.9e-91 337.8 187 87.2
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 1.7e-90 336.3 209 76.6
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 2.2e-90 335.9 185 85.9
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 6.5e-90 334.3 190 82.6
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 4.2e-89 331.6 209 77.0
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 3.6e-88 328.6 206 75.2
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 2.6e-86 322.4 209 72.2
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 7.5e-86 320.9 208 71.2
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 3.5e-83 312.0 206 71.4
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 2.5e-81 305.8 197 76.1
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 1.2e-78 297.0 205 66.3
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 2.6e-78 295.8 209 71.8
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 1.7e-77 293.1 165 83.0
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 8.3e-77 290.8 165 83.6
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 7.3e-73 277.7 151 86.1
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 8.3e-69 264.2 209 65.6
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 1.9e-65 253.1 208 59.6
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 1.9e-65 253.1 179 68.2
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 4.3e-65 251.9 204 61.3
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 3.4e-62 242.3 167 68.9
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 3.7e-61 238.8 208 55.3
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 2.1e-59 233.0 135 81.5
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.8e-55 219.9 206 52.9
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 3.2e-52 209.1 152 68.4
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 1.2e-46 190.7 206 47.6
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 2.5e-41 172.9 149 61.7
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 4.3e-41 172.2 207 39.6
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 6.4e-37 158.3 143 60.8
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 4.6e-35 152.1 136 52.2
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.0e-34 151.0 84 83.3
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 1.3e-34 150.6 84 83.3
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 2.4e-31 139.8 135 50.4
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 4.9e-29 132.1 227 35.7
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 4.6e-27 125.6 74 79.7
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 3.2e-20 102.8 76 68.4
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 1.8e-15 87.0 43 90.7


User provided reference genes

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