Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0219 Trochodendron aralioides HOM05D000989 ORTHO05D006109 3.2e-75 285.0 145 100.0
TAR626G0832 Trochodendron aralioides HOM05D000989 ORTHO05D006109 3.2e-75 285.0 145 100.0
Dinv20318 Davidia involucrata HOM05D000989 ORTHO05D006109 1.1e-43 180.3 146 63.7
Atru.chr3.4104 Acer truncatum HOM05D000989 ORTHO05D006109 2.7e-42 175.6 144 64.6
TAR383G0471 Trochodendron aralioides HOM05D000989 ORTHO05D006109 3.5e-42 175.3 148 66.9
Actinidia38817 Actinidia chinensis HOM05D000989 ORTHO05D006109 1.7e-41 172.9 146 61.6
PSO063G2540 Papaver somniferum HOM05D000989 ORTHO05D006109 3.0e-41 172.2 151 60.9
Thecc.06G052000 Theobroma cacao HOM05D000989 ORTHO05D006109 3.0e-41 172.2 147 63.9
PSO170G5971 Papaver somniferum HOM05D000989 ORTHO05D006109 6.6e-41 171.0 151 60.9
QL05p085514 Quercus lobata HOM05D000989 ORTHO05D006109 5.6e-40 167.9 145 62.8
Hma1.2p1_0141F.1_g064000 Hydrangea macrophylla HOM05D000989 ORTHO05D006109 1.6e-39 166.4 146 62.3
Duzib192G0753 Durio zibethinus HOM05D000989 ORTHO05D006109 2.8e-39 165.6 150 62.0
Potri.007G002700 Populus trichocarpa HOM05D000989 ORTHO05D006109 2.8e-39 165.6 146 62.3
Sabra07G0002000 Salix brachista HOM05D000989 ORTHO05D006109 3.6e-39 165.2 143 62.2
Haze_16237 Corylus avellana HOM05D000989 ORTHO05D006109 4.8e-39 164.9 145 60.7
RcHm_v2.0_Chr2g0148611 Rosa chinensis HOM05D000989 ORTHO05D006109 1.4e-38 163.3 146 64.4
GSVIVG01029461001 Vitis vinifera HOM05D000989 ORTHO05D006109 1.4e-38 163.3 146 63.0
CSS0036335 Camellia sinensis var. sinensis HOM05D000989 ORTHO05D006109 2.4e-38 162.5 146 61.0
Aqoxy7G02659 Aquilegia oxysepala HOM05D000989 ORTHO05D006109 4.0e-38 161.8 145 63.4
Gohir.A05G116032 Gossypium hirsutum HOM05D000989 ORTHO05D006109 4.0e-38 161.8 146 60.3
Cfa023514 Carpinus fangiana HOM05D000989 ORTHO05D006109 6.9e-38 161.0 146 60.3
FvH4_6g36480 Fragaria vesca HOM05D000989 ORTHO05D006109 6.9e-38 161.0 145 63.4
FAN14G2118 Fragaria x ananassa HOM05D000989 ORTHO05D006109 6.9e-38 161.0 145 63.4
COL.COLO4_19515 Corchorus olitorius HOM05D000989 ORTHO05D006109 9.0e-38 160.6 146 59.6
Gohir.D05G116600 Gossypium hirsutum HOM05D000989 ORTHO05D006109 1.5e-37 159.8 146 60.3
Gorai.009G120600 Gossypium raimondii HOM05D000989 ORTHO05D006109 1.5e-37 159.8 146 60.3
Prupe.3G027000 Prunus persica HOM05D000989 ORTHO05D006109 2.6e-37 159.1 143 62.2
Potri.014G001100 Populus trichocarpa HOM05D000989 ORTHO05D006109 3.4e-37 158.7 144 61.1
MBI16_g00831_MAGBIO Magnolia biondii HOM05D000989 ORTHO05D006109 9.9e-37 157.1 139 61.2
FAN02G4168 Fragaria x ananassa HOM05D000989 ORTHO05D006109 1.3e-36 156.8 151 61.6
Ciclev10028538m.g Citrus clementina HOM05D000989 ORTHO05D006109 1.7e-36 156.4 142 58.5
Nn8g41214 Nelumbo nucifera HOM05D000989 ORTHO05D006109 4.9e-36 154.8 149 56.4
Atru.chr3.4101 Acer truncatum HOM05D000989 ORTHO05D006109 6.4e-36 154.5 132 63.6
CiPaw.01G093100 Carya illinoinensis HOM05D000989 ORTHO05D006109 8.4e-36 154.1 149 57.0
Manes.14G000100 Manihot esculenta HOM05D000989 ORTHO05D006109 8.4e-36 154.1 143 58.7
TWI12G0396 Tripterygium wilfordii HOM05D000989 ORTHO05D006109 8.4e-36 154.1 141 56.0
FAN05G4662 Fragaria x ananassa HOM05D000989 ORTHO05D006109 1.1e-35 153.7 151 60.9
Rhsim08G0251900 Rhododendron simsii HOM05D000989 ORTHO05D006109 1.1e-35 153.7 144 56.9
MD09G1168600 Malus domestica HOM05D000989 ORTHO05D006109 1.4e-35 153.3 143 58.7
Lj3g0006607 Lotus japonicus HOM05D000989 ORTHO05D006109 2.4e-35 152.5 145 58.6
CANSAT01G0659 Cannabis sativa HOM05D000989 ORTHO05D006109 7.1e-35 151.0 147 55.1
Eucgr.F04053 Eucalyptus grandis HOM05D000989 ORTHO05D006109 1.2e-34 150.2 140 57.1
FAN09G3581 Fragaria x ananassa HOM05D000989 ORTHO05D006109 1.6e-34 149.8 152 59.9
MD17G1158100 Malus domestica HOM05D000989 ORTHO05D006109 1.6e-34 149.8 143 58.7
Sabra14G0002700 Salix brachista HOM05D000989 ORTHO05D006109 1.6e-34 149.8 143 58.7
AUR62001309 Chenopodium quinoa HOM05D000989 ORTHO05D006109 2.7e-34 149.1 145 55.9
Sabra14G0003500 Salix brachista HOM05D000989 ORTHO05D006109 2.7e-34 149.1 143 58.0
Duzib235G1336 Durio zibethinus HOM05D000989 ORTHO05D006109 3.5e-34 148.7 144 58.3
Thhalv10011546m.g Eutrema salsugineum HOM05D000989 ORTHO05D006109 6.0e-34 147.9 145 52.4
Glyma.08G226000 Glycine max HOM05D000989 ORTHO05D006109 6.0e-34 147.9 147 55.1
Sed0020073 Sechium edule HOM05D000989 ORTHO05D006109 7.9e-34 147.5 136 60.3
EL10Ac7g18115 Beta vulgaris HOM05D000989 ORTHO05D006109 1.3e-33 146.7 145 55.2
Lj5A20T31 Lonicera japonica HOM05D000989 ORTHO05D006109 1.8e-33 146.4 142 56.3
Hund05662 Selenicereus undatus HOM05D000989 ORTHO05D006109 3.9e-33 145.2 142 54.2
AL1G64210 Arabidopsis lyrata HOM05D000989 ORTHO05D006109 5.1e-33 144.8 146 52.1
Carub.0001s4457 Capsella rubella HOM05D000989 ORTHO05D006109 1.1e-32 143.7 142 52.8
Ca_03771_v3 Cicer arietinum L. HOM05D000570 ORTHO05D001174 1.1e-32 143.7 133 58.6
HanXRQChr09g0277441 Helianthus annuus HOM05D000989 ORTHO05D006109 1.5e-32 143.3 138 52.9
Lsat_1_v5_gn_4_106160 Lactuca sativa HOM05D000989 ORTHO05D006109 1.5e-32 143.3 134 54.5
Phvul.010G165300 Phaseolus vulgaris HOM05D000989 ORTHO05D006109 1.5e-32 143.3 147 53.1
ClCG05G012260 Citrullus lanatus HOM05D000989 ORTHO05D006109 1.9e-32 142.9 135 56.3
Glyma.07G001000 Glycine max HOM05D000989 ORTHO05D006109 2.5e-32 142.5 147 55.1
Nn5g26976 Nelumbo nucifera HOM05D000989 ORTHO05D006109 5.6e-32 141.4 132 59.1
Gorai.005G119500 Gossypium raimondii HOM05D000989 ORTHO05D006109 9.6e-32 140.6 145 54.5
Gohir.D02G105300 Gossypium hirsutum HOM05D000989 ORTHO05D006109 2.1e-31 139.4 145 54.5
SGA_v2.0_scaffold71G24021 Striga asiatica HOM05D000989 ORTHO05D006109 2.8e-31 139.0 146 50.7
AT3G13062 Arabidopsis thaliana HOM05D000989 ORTHO05D006109 3.7e-31 138.7 149 50.3
C03p46110 Brassica napus HOM05D000989 ORTHO05D006109 3.7e-31 138.7 148 52.0
BolC3t16883H Brassica oleracea HOM05D000989 ORTHO05D006109 3.7e-31 138.7 148 52.0
THA.LOC104815704 Tarenaya hassleriana HOM05D000989 ORTHO05D006109 3.7e-31 138.7 146 53.4
Thhalv10020844m.g Eutrema salsugineum HOM05D000989 ORTHO05D006109 4.8e-31 138.3 150 50.0
Aa31LG10G220 Aethionema arabicum HOM05D000989 ORTHO05D006109 8.1e-31 137.5 153 49.7
Carub.0003s1239 Capsella rubella HOM05D000989 ORTHO05D006109 8.1e-31 137.5 147 51.7
AUR62025691 Chenopodium quinoa HOM05D000989 ORTHO05D006109 8.1e-31 137.5 139 53.2
Medtr4g005140 Medicago truncatula HOM05D000989 ORTHO05D006109 8.1e-31 137.5 140 52.1
SGA_v2.0_scaffold122G33258 Striga asiatica HOM05D000989 ORTHO05D006109 8.1e-31 137.5 141 52.5
AL3G24790 Arabidopsis lyrata HOM05D000989 ORTHO05D006109 1.1e-30 137.1 149 51.0
Oeu035084.1 Olea europaea HOM05D000989 ORTHO05D006109 1.1e-30 137.1 147 53.7
TPR.G38747 Trifolium pratense HOM05D000989 ORTHO05D006109 1.1e-30 137.1 141 56.0
VMungo0331G0118 Vigna mungo HOM05D000989 ORTHO05D006109 1.1e-30 137.1 143 52.4
Psat7g264760 Pisum sativum HOM05D000570 ORTHO05D001174 1.4e-30 136.7 130 54.6
AT1G55960 Arabidopsis thaliana HOM05D000989 ORTHO05D006109 1.8e-30 136.3 143 50.3
MSTRG.11572 Avicennia marina HOM05D000989 ORTHO05D006109 1.8e-30 136.3 149 53.0
CARHR087630 Cardamine hirsuta HOM05D000989 ORTHO05D006109 1.8e-30 136.3 149 49.7
A03p38020 Brassica napus HOM05D000989 ORTHO05D006109 3.1e-30 135.6 152 52.0
Sp1g41570 Schrenkiella parvula HOM05D000989 ORTHO05D006109 3.1e-30 135.6 145 50.3
arahy.Tifrunner.gnm1.ann1.ECX43N Arachis hypogaea HOM05D000989 ORTHO05D006109 4.0e-30 135.2 148 51.4
DCAR_007676 Daucus carota HOM05D000989 ORTHO05D006109 5.3e-30 134.8 147 53.7
CsaV3_3G020170 Cucumis sativus L. HOM05D000989 ORTHO05D006109 9.0e-30 134.0 135 56.3
BraA03t12954Z Brassica rapa HOM05D000989 ORTHO05D006109 1.2e-29 133.7 148 51.4
CARHR045700 Cardamine hirsuta HOM05D000989 ORTHO05D006109 1.5e-29 133.3 146 49.3
SalBow6G4719 Salvia bowleyana HOM05D000989 ORTHO05D006109 1.5e-29 133.3 143 51.7
Ah.08g217990 Amaranthus hybridus HOM05D000989 ORTHO05D006109 2.0e-29 132.9 144 50.0
BraA01t04080Z Brassica rapa HOM05D000570 ORTHO05D006109 4.5e-29 131.7 152 50.7
Gohir.A03G088600 Gossypium hirsutum HOM05D000989 ORTHO05D006109 5.8e-29 131.3 145 51.0
BcaC08g43665 Brassica carinata HOM05D000989 ORTHO05D006109 7.6e-29 131.0 146 50.0
BolC6t36168H Brassica oleracea HOM05D000989 ORTHO05D006109 7.6e-29 131.0 146 50.0
MELO3C023731.2 Cucumis melo HOM05D000989 ORTHO05D006109 7.6e-29 131.0 135 54.8
A01p40460 Brassica napus HOM05D000989 ORTHO05D006109 1.3e-28 130.2 152 50.0
BraSC56t46391Z Brassica rapa HOM05D000989 ORTHO05D006109 1.3e-28 130.2 144 48.6
Migut.I01212 Erythranthe guttata HOM05D000989 ORTHO05D006109 1.3e-28 130.2 142 52.1
Sp3g11220 Schrenkiella parvula HOM05D000989 ORTHO05D006109 1.7e-28 129.8 149 50.3
Sc15g0001170 Simmondsia chinensis HOM05D000989 ORTHO05D006109 1.7e-28 129.8 142 51.4
ATR0626G329 Amborella trichopoda HOM05D000989 ORTHO05D006109 2.2e-28 129.4 143 53.1
C06p10850 Brassica napus HOM05D000989 ORTHO05D006109 2.2e-28 129.4 146 49.3
C01p52050 Brassica napus HOM05D000989 ORTHO05D006109 4.9e-28 128.3 152 50.0
BolC1t05148H Brassica oleracea HOM05D000989 ORTHO05D006109 4.9e-28 128.3 152 50.0
PGR102G0324 Punica granatum HOM05D000989 ORTHO05D006109 4.9e-28 128.3 144 50.7
THA.LOC104822743 Tarenaya hassleriana HOM05D000989 ORTHO05D006109 8.4e-28 127.5 149 47.0
ECA232G1648 Erigeron canadensis HOM05D000989 ORTHO05D006109 2.4e-27 125.9 128 52.3
ECA233G3623 Erigeron canadensis HOM05D001953 ORTHO05D006109 2.4e-27 125.9 128 52.3
Nitab4.5_0000499g0090 Nicotiana tabacum HOM05D000989 ORTHO05D006109 3.2e-27 125.6 145 48.3
BcaC01g04007 Brassica carinata HOM05D000989 ORTHO05D006109 9.3e-27 124.0 148 50.0
CAN.G790.1 Capsicum annuum HOM05D000989 ORTHO05D006109 2.1e-26 122.9 146 46.6
Sopen03g041790 Solanum pennellii HOM05D000989 ORTHO05D006109 2.1e-26 122.9 147 50.3
HPP92_018325 Vanilla planifolia HOM05D000989 ORTHO05D006109 6.0e-26 121.3 144 46.5
Solyc03g124060.3 Solanum lycopersicum HOM05D000989 ORTHO05D006109 7.9e-26 120.9 149 49.7
BcaB07g33179 Brassica carinata HOM05D000989 ORTHO05D006109 1.8e-25 119.8 137 48.2
CDE05G1780 Ceratophyllum demersum HOM05D000989 ORTHO05D006109 2.5e-24 115.9 140 47.1
CDE05G3314 Ceratophyllum demersum HOM05D000989 ORTHO05D006109 2.5e-24 115.9 135 49.6
Peaxi162Scf00684g00414 Petunia axillaris HOM05D000989 ORTHO05D006109 2.5e-24 115.9 135 48.9
arahy.Tifrunner.gnm1.ann1.FCN3VB Arachis hypogaea HOM05D000989 ORTHO05D006109 4.0e-22 108.6 186 40.3
PGSC0003DMG400009197 Solanum tuberosum HOM05D000989 ORTHO05D006109 5.3e-22 108.2 146 46.6
vmacro18725 Vaccinium macrocarpon HOM05D000989 ORTHO05D006109 1.2e-21 107.1 251 33.5
Zm00001eb240920 Zea mays HOM05D000989 ORTHO05D006109 3.4e-21 105.5 148 41.2
Nitab4.5_0004098g0010 Nicotiana tabacum HOM05D000989 ORTHO05D006109 7.6e-21 104.4 145 44.8
Zm00001eb082000 Zea mays HOM05D000989 ORTHO05D006109 1.0e-20 104.0 148 40.5
SEGI_20704 Sequoiadendron giganteum HOM05D000989 ORTHO05D006109 1.1e-19 100.5 145 43.4
Cc04_g00100 Coffea canephora HOM05D000989 ORTHO05D006109 2.5e-19 99.4 129 47.3
Os02g0468400 Oryza sativa ssp. japonica HOM05D000989 ORTHO05D006109 4.2e-19 98.6 143 39.9
RcHm_v2.0_Chr1g0356301 Rosa chinensis HOM05D000989 ORTHO05D006109 1.0e-17 94.0 59 76.3
Cpa.g.sc10.6 Carica papaya HOM05D000989 ORTHO05D006109 4.3e-16 88.6 56 75.0
Pp3c23_14010 Physcomitrium patens HOM05D000989 ORTHO05D006109 2.8e-15 85.9 140 38.6
Zm00001eb043190 Zea mays HOM05D004148 ORTHO05D006109 7.7e-13 77.8 111 39.6
SMO364G0840 Selaginella moellendorffii HOM05D000989 ORTHO05D006109 6.1e-10 68.2 135 34.8
SGA_v2.0_scaffold71G24020 Striga asiatica HOM05D000011 ORTHO05D000018 2.3e-09 66.2 90 40.0
Mapoly0020s0077 Marchantia polymorpha HOM05D000989 ORTHO05D006109 8.8e-09 64.3 136 33.1
AagrBONN_evm.TU.Sc2ySwM_117.3861 Anthoceros agrestis HOM05D000989 ORTHO05D006109 1.3e-07 60.5 146 31.5


User provided reference genes

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