Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0446 Trochodendron aralioides HOM05D000070 ORTHO05D006683 9.3e-226 786.6 404 100.0
TAR624G0583 Trochodendron aralioides HOM05D000070 ORTHO05D006683 8.0e-153 544.3 411 73.0
GSVIVG01014274001 Vitis vinifera HOM05D000070 ORTHO05D006683 3.0e-75 286.6 414 43.7
Haze_09387 Corylus avellana HOM05D000070 ORTHO05D006683 8.8e-67 258.5 411 42.3
Nn1g06393 Nelumbo nucifera HOM05D000070 ORTHO05D006683 2.0e-66 257.3 412 40.3
Cfa020618 Carpinus fangiana HOM05D000070 ORTHO05D006683 2.8e-65 253.4 415 42.9
QL08p023642 Quercus lobata HOM05D000070 ORTHO05D006683 5.3e-64 249.2 399 40.9
CiPaw.11G166700 Carya illinoinensis HOM05D000070 ORTHO05D006683 3.5e-63 246.5 412 41.0
PSO541G4369 Papaver somniferum HOM05D000070 ORTHO05D006683 2.3e-59 233.8 378 40.2
Atru.chr2.2387 Acer truncatum HOM05D000070 ORTHO05D006683 1.8e-56 224.2 436 35.1
Dinv14947 Davidia involucrata HOM05D000070 ORTHO05D006683 3.1e-56 223.4 387 38.8
Manes.15G090100 Manihot esculenta HOM05D000070 ORTHO05D006683 5.0e-54 216.1 395 37.0
MD11G1256000 Malus domestica HOM05D000070 ORTHO05D006683 8.6e-54 215.3 377 37.9
Aqoxy1G02305 Aquilegia oxysepala HOM05D000070 ORTHO05D006683 1.0e-51 208.4 375 36.3
TWI38G2035 Tripterygium wilfordii HOM05D000070 ORTHO05D006683 1.0e-51 208.4 393 37.4
Actinidia35238 Actinidia chinensis HOM05D000070 ORTHO05D006683 1.8e-51 207.6 398 37.7
Ciclev10007229m.g Citrus clementina HOM05D000070 ORTHO05D006683 4.9e-49 199.5 393 39.4
RcHm_v2.0_Chr5g0032311 Rosa chinensis HOM05D000070 ORTHO05D006683 6.3e-49 199.1 429 34.7
vmacro09518 Vaccinium macrocarpon HOM05D000070 ORTHO05D006683 1.1e-48 198.4 340 38.2
Thecc.07G098900 Theobroma cacao HOM05D000070 ORTHO05D006683 2.4e-48 197.2 407 37.3
Gohir.A01G060800 Gossypium hirsutum HOM05D000070 ORTHO05D006683 6.6e-46 189.1 285 42.5
Duzib170G1082 Durio zibethinus HOM05D000070 ORTHO05D006683 1.1e-45 188.3 380 36.1
Gohir.D01G047300 Gossypium hirsutum HOM05D000070 ORTHO05D006683 6.1e-44 182.6 290 42.1
FvH4_3g19240 Fragaria vesca HOM05D000070 ORTHO05D006683 8.0e-44 182.2 191 48.7
Gorai.002G066800 Gossypium raimondii HOM05D000070 ORTHO05D006683 1.0e-43 181.8 290 42.1
FAN11G2237 Fragaria x ananassa HOM05D000070 ORTHO05D006683 4.0e-43 179.9 191 48.2
FAN16G3451 Fragaria x ananassa HOM05D000070 ORTHO05D006683 1.2e-42 178.3 198 46.0
Potri.011G141400 Populus trichocarpa HOM05D000070 ORTHO05D006683 2.6e-42 177.2 394 33.8
Lj1A837G48 Lonicera japonica HOM05D000070 ORTHO05D006683 4.4e-42 176.4 398 34.2
FAN21G0502 Fragaria x ananassa HOM05D000070 ORTHO05D006683 9.8e-42 175.3 191 46.6
FAN25G1528 Fragaria x ananassa HOM05D000070 ORTHO05D006683 3.7e-41 173.3 185 48.6
Cpa.g.sc80.3 Carica papaya HOM05D006724 ORTHO05D006683 7.0e-40 169.1 407 32.7
Duzib213G1081 Durio zibethinus HOM05D000070 ORTHO05D006683 1.2e-39 168.3 349 36.4
Sabra11G0127000 Salix brachista HOM05D000070 ORTHO05D006683 2.7e-39 167.2 338 34.9
Phvul.005G069600 Phaseolus vulgaris HOM05D000070 ORTHO05D006683 2.5e-37 160.6 187 48.7
Cc05_g11650 Coffea canephora HOM05D000070 ORTHO05D006683 3.6e-36 156.8 272 36.4
Glyma.12G227000 Glycine max HOM05D000070 ORTHO05D006683 8.0e-36 155.6 274 39.4
Glyma.13G273300 Glycine max HOM05D000070 ORTHO05D006683 1.5e-34 151.4 194 45.4
Gohir.D08G032300 Gossypium hirsutum HOM05D000070 ORTHO05D006683 1.5e-34 151.4 290 36.9
Gorai.004G029700 Gossypium raimondii HOM05D000070 ORTHO05D006683 2.0e-34 151.0 290 37.2
Lj3g0013945 Lotus japonicus HOM05D000070 ORTHO05D006683 2.0e-34 151.0 384 31.2
Gohir.A08G021424 Gossypium hirsutum HOM05D000070 ORTHO05D006683 7.5e-34 149.1 290 40.7
PGR083G0044 Punica granatum HOM05D000070 ORTHO05D006683 7.5e-34 149.1 184 42.9
Lalb_Chr25g0286211 Lupinus albus HOM05D000070 ORTHO05D006683 9.8e-34 148.7 197 42.6
Eucgr.F01177 Eucalyptus grandis HOM05D000070 ORTHO05D006683 1.7e-33 147.9 374 29.1
Lalb_Chr20g0109491 Lupinus albus HOM05D000070 ORTHO05D006683 4.9e-33 146.4 204 42.6
VMungo1080G0328 Vigna mungo HOM05D000070 ORTHO05D006683 4.9e-33 146.4 194 41.8
arahy.Tifrunner.gnm1.ann1.48N9B9 Arachis hypogaea HOM05D000070 ORTHO05D006683 7.0e-32 142.5 186 43.5
DCAR_013128 Daucus carota HOM05D000070 ORTHO05D006683 2.1e-31 141.0 211 40.3
Ca_03533_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006683 2.7e-31 140.6 187 41.7
Peaxi162Scf00069g01833 Petunia axillaris HOM05D000070 ORTHO05D006683 2.7e-31 140.6 192 37.5
Psat5g241520 Pisum sativum HOM05D000070 ORTHO05D006683 4.6e-31 139.8 193 39.4
PGSC0003DMG400012401 Solanum tuberosum HOM05D000070 ORTHO05D006683 1.0e-30 138.7 398 28.4
CsaV3_3G019540 Cucumis sativus L. HOM05D000070 ORTHO05D006683 2.3e-30 137.5 388 28.6
ECA240G2408 Erigeron canadensis HOM05D000070 ORTHO05D006683 2.3e-30 137.5 348 31.3
Medtr2g078630 Medicago truncatula HOM05D000070 ORTHO05D006683 3.0e-30 137.1 193 39.4
TPR.G7945 Trifolium pratense HOM05D000070 ORTHO05D006683 3.9e-30 136.7 198 41.4
MELO3C019399.2 Cucumis melo HOM05D000070 ORTHO05D006683 5.1e-30 136.3 187 39.0
Sed0024008 Sechium edule HOM05D000070 ORTHO05D006683 5.1e-30 136.3 194 37.6
CAN.G162.29 Capsicum annuum HOM05D000070 ORTHO05D006683 6.6e-30 136.0 193 38.3
Solyc07g062770.2 Solanum lycopersicum HOM05D000070 ORTHO05D006683 1.1e-29 135.2 192 39.1
AUR62036148 Chenopodium quinoa HOM05D000070 ORTHO05D006683 1.9e-29 134.4 199 36.2
Sopen07g030990 Solanum pennellii HOM05D000070 ORTHO05D006683 2.5e-29 134.0 189 39.2
Nitab4.5_0000246g0030 Nicotiana tabacum HOM05D000070 ORTHO05D006683 5.6e-29 132.9 329 28.3
AUR62019488 Chenopodium quinoa HOM05D000070 ORTHO05D006683 7.3e-29 132.5 193 38.9
ATR0602G265 Amborella trichopoda HOM05D000070 ORTHO05D006683 1.2e-28 131.7 189 39.7
arahy.Tifrunner.gnm1.ann1.T5288F Arachis hypogaea HOM05D000070 ORTHO05D006683 3.6e-28 130.2 177 44.1
CANSAT35G1857 Cannabis sativa HOM05D000070 ORTHO05D006683 3.6e-28 130.2 207 39.6
ClCG05G009240 Citrullus lanatus HOM05D000070 ORTHO05D006683 6.2e-28 129.4 191 38.7
Nitab4.5_0002019g0010 Nicotiana tabacum HOM05D000070 ORTHO05D006683 1.4e-27 128.3 331 28.7
CSS0012964 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006683 4.0e-27 126.7 281 34.9
MSTRG.14209 Avicennia marina HOM05D000070 ORTHO05D006683 5.2e-27 126.3 413 28.8
Dinv20211 Davidia involucrata HOM05D000070 ORTHO05D006683 5.2e-27 126.3 269 36.1
ClCG04G000030 Citrullus lanatus HOM05D000070 ORTHO05D006683 2.6e-26 124.0 180 37.8
CDE10G0809 Ceratophyllum demersum HOM05D000070 ORTHO05D006683 3.4e-26 123.6 202 34.7
EL10Ac4g08256 Beta vulgaris HOM05D000070 ORTHO05D006683 9.9e-26 122.1 186 37.6
SGA_v2.0_scaffold70G23693 Striga asiatica HOM05D000070 ORTHO05D006683 6.4e-25 119.4 196 38.8
Sp3g13330 Schrenkiella parvula HOM05D000070 ORTHO05D006683 2.4e-24 117.5 184 33.2
THA.LOC104810458 Tarenaya hassleriana HOM05D000070 ORTHO05D006683 5.4e-24 116.3 190 33.7
Thhalv10019880m.g Eutrema salsugineum HOM05D000070 ORTHO05D006683 7.1e-24 115.9 184 32.6
BcaC01g03897 Brassica carinata HOM05D000070 ORTHO05D006683 2.1e-23 114.4 184 32.1
Carub.0003s1477 Capsella rubella HOM05D000070 ORTHO05D006683 1.7e-22 111.3 184 32.1
C03p47510 Brassica napus HOM05D000070 ORTHO05D006683 2.3e-22 110.9 185 32.4
BolC3t17015H Brassica oleracea HOM05D000070 ORTHO05D006683 2.3e-22 110.9 185 32.4
AL3G27480 Arabidopsis lyrata HOM05D000070 ORTHO05D006683 8.6e-22 109.0 184 31.5
HanXRQChr13g0391161 Helianthus annuus HOM05D000070 ORTHO05D006683 1.9e-21 107.8 185 37.3
CARHR090100 Cardamine hirsuta HOM05D000070 ORTHO05D006683 1.6e-20 104.8 192 33.9
AT3G15120 Arabidopsis thaliana HOM05D000070 ORTHO05D006683 6.2e-20 102.8 184 31.0
Migut.H01962 Erythranthe guttata HOM05D000070 ORTHO05D006683 6.2e-20 102.8 205 35.1
SHI21484 Sapria himalayana HOM05D000070 ORTHO05D006683 8.1e-20 102.4 188 34.6
Aa31LG8G2340 Aethionema arabicum HOM05D000070 ORTHO05D006683 1.1e-19 102.1 176 30.7
BraA03t13065Z Brassica rapa HOM05D000070 ORTHO05D006683 3.1e-19 100.5 185 30.3
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 1.2e-18 98.6 104 74.0
A03p39160 Brassica napus HOM05D000070 ORTHO05D006683 1.5e-18 98.2 185 29.7
Zm00001eb157300 Zea mays HOM05D000070 ORTHO05D006683 1.5e-18 98.2 176 29.0
SalBow7G0119 Salvia bowleyana HOM05D000070 ORTHO05D006683 7.6e-18 95.9 197 32.5
HPP92_024566 Vanilla planifolia HOM05D000070 ORTHO05D006683 4.9e-17 93.2 164 35.4
Os01g0668300 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D006683 1.9e-16 91.3 167 29.9
unitig_899.g15571 Utricularia gibba HOM05D000070 ORTHO05D006683 9.6e-13 79.0 279 24.0
Psat5g066840 Pisum sativum HOM05D000255 ORTHO05D006683 1.4e-11 75.1 120 36.7
Lsat_1_v5_gn_9_98220 Lactuca sativa HOM05D000070 ORTHO05D006683 6.9e-11 72.8 176 30.7
SEGI_00098 Sequoiadendron giganteum HOM05D000070 ORTHO05D006683 1.7e-09 68.2 136 33.8
Thecc.10G085500 Theobroma cacao HOM05D000651 ORTHO05D001126 1.6e-07 61.6 72 43.1


User provided reference genes

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