Gene: Sopen07g030990

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g030990
  • Transcript Identifier Sopen07g030990.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 76482722-76490801 : positive

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g030990.1

Descriptions

  • Description P-loop containing nucleoside triphosphate hydrolases superfamily protein | FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core , ATPase, AAA type, core , ATPase, AAA-type, conserved site | BEST Arabidopsis thaliana protein match is: cell division cycle protein 48-related / CDC48-related
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031936
ISO
PLAZA Integrative Orthologynegative regulation of chromatin silencing AT3G15120
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT3G15120

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G15120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G15120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041569 AAA ATPase, AAA+ lid domain
IPR003959 ATPase, AAA-type, core
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
Mapman id Description
12.5.2.6.2 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.BRAT1-BRP1 anti-silencing regulator complex.component BRP1
14.3.1.1 DNA damage response.homologous recombination repair (HR).BRCA1-BARD1 DNA-damage response heterodimer.component BRCA1/BARD1