Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 3.8e-175 619.0 605 100.0
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 4.1e-100 369.8 564 77.1
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 3.4e-99 366.7 564 79.6
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 3.8e-98 363.2 564 78.4
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 9.4e-97 358.6 564 78.4
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 2.7e-96 357.1 564 79.1
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 7.9e-96 355.5 564 76.8
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 9.7e-94 348.6 564 75.9
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 2.2e-93 347.4 564 72.5
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 3.4e-91 340.1 564 76.1
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 3.8e-90 336.7 564 70.9
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 5.0e-90 336.3 564 81.2
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 4.2e-89 333.2 564 77.0
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 9.4e-89 332.0 506 77.3
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 1.2e-88 331.6 566 72.6
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 2.1e-88 330.9 564 73.4
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 2.7e-88 330.5 570 75.1
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 4.7e-88 329.7 564 77.8
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 6.1e-88 329.3 564 79.6
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 2.3e-87 327.4 564 74.8
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 2.0e-86 324.3 608 75.2
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 5.7e-86 322.8 565 71.2
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 9.7e-86 322.0 564 74.8
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 1.3e-85 321.6 564 73.4
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 2.2e-85 320.9 564 76.2
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 8.2e-85 318.9 506 78.1
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 1.8e-84 317.8 564 80.1
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 5.3e-84 316.2 570 75.4
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 7.0e-84 315.8 567 66.8
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 9.1e-84 315.5 564 73.6
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 2.0e-83 314.3 564 73.2
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 2.6e-83 313.9 566 70.3
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 1.7e-82 311.2 564 77.8
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 5.0e-82 309.7 564 77.8
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 6.5e-82 309.3 564 75.0
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 1.1e-81 308.5 564 75.9
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 4.2e-81 306.6 564 77.7
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 7.2e-81 305.8 582 54.3
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 7.2e-81 305.8 564 74.8
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 9.4e-81 305.4 564 76.1
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 3.6e-80 303.5 564 69.1
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 8.0e-80 302.4 564 75.0
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 1.8e-79 301.2 564 69.5
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 4.0e-79 300.1 564 72.3
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 1.5e-78 298.1 564 77.3
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 3.3e-78 297.0 565 76.6
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 5.7e-78 296.2 564 77.5
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 7.5e-78 295.8 506 64.8
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 1.3e-77 295.0 573 59.9
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 2.2e-77 294.3 563 76.9
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 3.7e-77 293.5 564 77.3
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 1.4e-76 291.6 564 78.5
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 3.1e-76 290.4 564 71.5
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 4.1e-76 290.0 564 69.9
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 7.0e-76 289.3 558 67.4
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 3.5e-75 287.0 571 67.1
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 5.9e-75 286.2 564 70.4
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 1.3e-74 285.0 581 75.0
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 1.7e-74 284.6 578 68.9
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 6.5e-74 282.7 564 68.3
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 8.5e-74 282.3 566 68.7
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 1.5e-73 281.6 577 69.5
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 1.9e-73 281.2 565 77.7
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 1.9e-73 281.2 581 66.8
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 4.2e-73 280.0 564 78.2
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 4.2e-73 280.0 565 75.4
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 7.2e-73 279.3 634 59.1
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 1.6e-72 278.1 566 68.2
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 1.4e-71 275.0 565 71.5
Oeu008016.1 Olea europaea HOM05D006220 ORTHO05D007590 1.8e-71 274.6 344 72.1
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 4.0e-71 273.5 562 66.7
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 1.5e-70 271.6 572 67.1
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 6.3e-69 266.2 564 72.5
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 1.4e-68 265.0 564 68.4
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 4.1e-68 263.5 543 75.5
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 4.1e-68 263.5 567 75.5
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 1.2e-67 261.9 433 79.0
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 1.6e-67 261.5 563 66.4
Dinv08311 Davidia involucrata HOM05D006220 ORTHO05D007590 2.0e-67 261.2 390 76.9
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 5.9e-67 259.6 531 66.5
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 1.3e-66 258.5 581 66.1
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 1.7e-66 258.1 564 68.3
MBI17_g46353_MAGBIO Magnolia biondii HOM05D006220 ORTHO05D007590 1.7e-66 258.1 389 73.8
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 5.0e-66 256.5 571 64.8
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 8.6e-66 255.8 506 69.0
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 1.5e-65 255.0 581 67.0
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 9.5e-65 252.3 572 65.4
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 9.5e-65 252.3 329 71.7
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 2.1e-64 251.1 564 67.4
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 4.0e-63 246.9 664 63.6
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 1.1e-57 228.8 624 57.7
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 5.8e-54 216.5 563 55.8
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 1.3e-53 215.3 582 62.9
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 1.8e-52 211.5 543 70.0
Nitab4.5_0001320g0170 Nicotiana tabacum HOM05D006220 ORTHO05D007590 3.2e-52 210.7 294 59.9
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 4.6e-51 206.8 573 64.2
Haze_09468 Corylus avellana HOM05D006220 ORTHO05D007590 1.6e-48 198.4 202 69.8
C05p51740 Brassica napus HOM05D006220 ORTHO05D007590 1.4e-47 195.3 519 66.1
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 5.2e-47 193.4 543 38.1
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 5.4e-44 183.3 572 55.1
MD11G1243500 Malus domestica HOM05D006220 ORTHO05D007590 3.1e-39 167.5 198 66.7
Lj1A847G19 Lonicera japonica HOM05D006220 ORTHO05D007590 8.9e-39 166.0 525 65.3
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 2.0e-38 164.9 567 62.8
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea HOM05D006220 ORTHO05D007590 4.4e-38 163.7 240 55.4
CBR_g29878 Chara braunii HOM05D006220 ORTHO05D007590 8.9e-31 139.4 240 47.1
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 8.4e-29 132.9 147 52.4
Sabra11G0106700 Salix brachista HOM05D006220 ORTHO05D007590 1.9e-25 121.7 75 78.7
Sabra11G0107000 Salix brachista HOM05D006220 ORTHO05D007590 1.9e-25 121.7 75 78.7
HPP92_027622 Vanilla planifolia HOM05D006220 ORTHO05D007590 4.3e-25 120.6 75 78.7
Sabra11G0105900 Salix brachista HOM05D006220 ORTHO05D007590 5.6e-25 120.2 75 77.3
Sabra11G0105600 Salix brachista HOM05D006220 ORTHO05D007590 1.2e-24 119.0 75 77.3
Nitab4.5_0001320g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 1.5e-22 112.1 98 62.2
Gohir.1Z049312 Gossypium hirsutum HOM05D006220 ORTHO05D007590 7.8e-19 99.8 120 49.2
HanXRQChr09g0260971 Helianthus annuus HOM05D006220 ORTHO05D007590 5.6e-17 93.6 60 71.7
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 5.6e-17 93.6 65 69.2
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 8.1e-16 89.7 114 46.5
Haze_09464 Corylus avellana HOM05D006220 ORTHO05D007590 8.4e-13 79.7 53 67.9
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 3.5e-11 74.3 75 44.0
Cc05_g12270 Coffea canephora HOM05D006220 ORTHO05D007590 4.6e-11 73.9 106 69.8
Cc05_g12290 Coffea canephora HOM05D006220 ORTHO05D007590 4.6e-11 73.9 106 69.8
Cc05_g12300 Coffea canephora HOM05D006220 ORTHO05D007590 4.6e-11 73.9 106 69.8
AL230U10010 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 1.3e-08 65.9 40 80.0
MCO03G083 Micromonas commoda HOM05D006220 ORTHO05D007590 9.9e-06 56.2 75 37.3


User provided reference genes

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