Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0184 Trochodendron aralioides HOM05D000187 ORTHO05D000230 3.5e-68 261.5 136 100.0
TAR129G0001 Trochodendron aralioides HOM05D000187 ORTHO05D000230 3.1e-40 168.7 125 70.4
Nn8g40562 Nelumbo nucifera HOM05D000187 ORTHO05D000230 1.1e-29 133.7 131 58.0
MBI16_g27294_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000230 1.5e-26 123.2 125 56.0
Atru.chr7.2640 Acer truncatum HOM05D000187 ORTHO05D000230 9.7e-26 120.6 128 53.1
PSO063G1761 Papaver somniferum HOM05D000187 ORTHO05D000230 1.4e-24 116.7 133 51.9
Manes.03G003900 Manihot esculenta HOM05D000187 ORTHO05D000230 1.0e-22 110.5 128 50.0
MBI14_g19441_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000230 1.7e-22 109.8 125 52.0
Thecc.09G007100 Theobroma cacao HOM05D000187 ORTHO05D000230 1.7e-22 109.8 128 51.6
Ca_15667_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000230 2.2e-22 109.4 127 48.8
PSO170G0496 Papaver somniferum HOM05D000187 ORTHO05D000230 2.2e-22 109.4 133 50.4
Ciclev10007897m.g Citrus clementina HOM05D000187 ORTHO05D000230 2.9e-22 109.0 128 49.2
Gohir.A06G105800 Gossypium hirsutum HOM05D000187 ORTHO05D000230 3.8e-22 108.6 128 50.8
Gohir.D06G108000 Gossypium hirsutum HOM05D000187 ORTHO05D000230 8.5e-22 107.5 128 49.2
Gorai.010G122800 Gossypium raimondii HOM05D000187 ORTHO05D000230 8.5e-22 107.5 128 49.2
COL.COLO4_19034 Corchorus olitorius HOM05D000187 ORTHO05D000230 3.2e-21 105.5 128 49.2
Lalb_Chr23g0269111 Lupinus albus HOM05D000187 ORTHO05D000230 3.2e-21 105.5 128 46.9
Medtr3g108808 Medicago truncatula HOM05D000187 ORTHO05D000230 3.2e-21 105.5 128 46.9
QL12p025137 Quercus lobata HOM05D000187 ORTHO05D000230 4.2e-21 105.1 127 48.8
Cfa013268 Carpinus fangiana HOM05D000187 ORTHO05D000230 7.2e-21 104.4 128 50.8
TPR.G12498 Trifolium pratense HOM05D000187 ORTHO05D000230 2.7e-20 102.4 128 46.1
Duzib187G1641 Durio zibethinus HOM05D000187 ORTHO05D000230 3.6e-20 102.1 127 49.6
Duzib168G0567 Durio zibethinus HOM05D000187 ORTHO05D000230 6.1e-20 101.3 128 47.7
Haze_21736 Corylus avellana HOM05D000187 ORTHO05D000230 1.4e-19 100.1 128 48.4
Phvul.009G101200 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 1.4e-19 100.1 128 46.9
Lalb_Chr08g0243551 Lupinus albus HOM05D000187 ORTHO05D000230 3.0e-19 99.0 128 46.1
Dinv03436 Davidia involucrata HOM05D000187 ORTHO05D000230 3.9e-19 98.6 127 47.2
VMungo1309G0084 Vigna mungo HOM05D000187 ORTHO05D000230 5.1e-19 98.2 131 45.0
Glyma.06G076600 Glycine max HOM05D000187 ORTHO05D000230 8.8e-19 97.4 128 46.1
Cpa.g.sc23.15 Carica papaya HOM05D000187 ORTHO05D000230 1.1e-18 97.1 128 49.2
Lj1g0013526 Lotus japonicus HOM05D000187 ORTHO05D000230 1.1e-18 97.1 127 43.3
arahy.Tifrunner.gnm1.ann1.9C1SB4 Arachis hypogaea HOM05D000187 ORTHO05D000230 1.5e-18 96.7 129 41.9
Gohir.D07G002200 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.5e-18 96.7 128 47.7
Gorai.001G002000 Gossypium raimondii HOM05D000187 ORTHO05D000230 1.5e-18 96.7 128 47.7
arahy.Tifrunner.gnm1.ann1.AIUA8N Arachis hypogaea HOM05D000187 ORTHO05D000230 1.9e-18 96.3 128 43.8
TWI32G1364 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 2.5e-18 95.9 128 44.5
Glyma.04G075400 Glycine max HOM05D000187 ORTHO05D000230 4.3e-18 95.1 128 44.5
TWI34G1594 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 4.3e-18 95.1 128 44.5
CiPaw.07G212600 Carya illinoinensis HOM05D000187 ORTHO05D000230 7.4e-18 94.4 131 45.0
CiPaw.08G019700 Carya illinoinensis HOM05D000187 ORTHO05D000230 9.7e-18 94.0 129 45.7
Sabra06G0212700 Salix brachista HOM05D000187 ORTHO05D000230 1.7e-17 93.2 123 49.6
Duzib150G0762 Durio zibethinus HOM05D000187 ORTHO05D000230 3.7e-17 92.0 127 44.9
RcHm_v2.0_Chr6g0304981 Rosa chinensis HOM05D000187 ORTHO05D000230 1.4e-16 90.1 128 47.7
Potri.006G274700 Populus trichocarpa HOM05D000187 ORTHO05D000230 2.4e-16 89.4 131 45.8
Lj7C750G13 Lonicera japonica HOM05D000187 ORTHO05D000230 4.1e-16 88.6 118 44.9
Sabra18G0013700 Salix brachista HOM05D000187 ORTHO05D000230 4.1e-16 88.6 131 47.3
CsaV3_2G031390 Cucumis sativus L. HOM05D000187 ORTHO05D000230 5.3e-16 88.2 128 45.3
Glyma.14G134600 Glycine max HOM05D000187 ORTHO05D000230 5.3e-16 88.2 128 44.5
Potri.018G005600 Populus trichocarpa HOM05D000187 ORTHO05D000230 5.3e-16 88.2 131 46.6
MD15G1107900 Malus domestica HOM05D000187 ORTHO05D000230 9.1e-16 87.4 128 44.5
FAN20G1520 Fragaria x ananassa HOM05D000187 ORTHO05D000230 2.6e-15 85.9 128 45.3
Manes.16G135700 Manihot esculenta HOM05D000187 ORTHO05D000230 2.6e-15 85.9 129 45.0
AUR62020599 Chenopodium quinoa HOM05D000187 ORTHO05D000230 4.5e-15 85.1 121 43.8
Aqoxy7G02346 Aquilegia oxysepala HOM05D000187 ORTHO05D000230 5.9e-15 84.7 107 50.5
Prupe.1G460200 Prunus persica HOM05D000187 ORTHO05D000230 7.7e-15 84.3 129 45.7
DCAR_001822 Daucus carota HOM05D000187 ORTHO05D000230 1.3e-14 83.6 134 43.3
Solyc12g096420.2 Solanum lycopersicum HOM05D000187 ORTHO05D000230 1.3e-14 83.6 121 42.1
MELO3C011189.2 Cucumis melo HOM05D000187 ORTHO05D000230 1.7e-14 83.2 127 44.1
Actinidia06419 Actinidia chinensis HOM05D000187 ORTHO05D000230 2.2e-14 82.8 125 43.2
AUR62009069 Chenopodium quinoa HOM05D000187 ORTHO05D000230 2.2e-14 82.8 121 43.0
Sopen12g032260 Solanum pennellii HOM05D000187 ORTHO05D000230 2.2e-14 82.8 121 42.1
Aqoxy7G02993 Aquilegia oxysepala HOM05D000187 ORTHO05D000230 2.9e-14 82.4 140 42.1
Gohir.D05G067000 Gossypium hirsutum HOM05D000187 ORTHO05D000230 2.9e-14 82.4 128 46.9
Gorai.009G067800 Gossypium raimondii HOM05D000187 ORTHO05D000230 2.9e-14 82.4 128 46.9
FvH4_2g36760 Fragaria vesca HOM05D000187 ORTHO05D000230 3.8e-14 82.0 128 44.5
FAN15G2261 Fragaria x ananassa HOM05D000187 ORTHO05D000230 3.8e-14 82.0 128 44.5
FAN27G0017 Fragaria x ananassa HOM05D000187 ORTHO05D000230 3.8e-14 82.0 128 43.8
Nitab4.5_0001159g0200 Nicotiana tabacum HOM05D000187 ORTHO05D000230 5.0e-14 81.6 121 39.7
Gohir.A05G064400 Gossypium hirsutum HOM05D000187 ORTHO05D000230 8.5e-14 80.9 128 46.1
Sed0025754 Sechium edule HOM05D000187 ORTHO05D000230 8.5e-14 80.9 131 44.3
ClCG08G012680 Citrullus lanatus HOM05D000187 ORTHO05D000230 1.4e-13 80.1 129 41.9
Ah.10g033860 Amaranthus hybridus HOM05D000187 ORTHO05D000230 1.9e-13 79.7 121 43.0
Hund03291 Selenicereus undatus HOM05D000187 ORTHO05D000230 2.5e-13 79.3 135 40.0
CANSAT25G2724 Cannabis sativa HOM05D000187 ORTHO05D000230 3.2e-13 79.0 131 44.3
Glyma.17G198300 Glycine max HOM05D000187 ORTHO05D000230 3.2e-13 79.0 128 43.0
Peaxi162Scf00459g00839 Petunia axillaris HOM05D000187 ORTHO05D000230 3.2e-13 79.0 120 38.3
Sc09g0010160 Simmondsia chinensis HOM05D000187 ORTHO05D000230 3.2e-13 79.0 122 38.5
Nitab4.5_0005481g0020 Nicotiana tabacum HOM05D000187 ORTHO05D000230 5.5e-13 78.2 132 37.1
Peaxi162Scf00045g00175 Petunia axillaris HOM05D000187 ORTHO05D000230 5.5e-13 78.2 123 41.5
CSS0044806 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 7.2e-13 77.8 125 39.2
Solyc08g006460.3 Solanum lycopersicum HOM05D000187 ORTHO05D000230 7.2e-13 77.8 122 41.0
Sopen08g002410 Solanum pennellii HOM05D000187 ORTHO05D000230 9.4e-13 77.4 122 40.2
Nitab4.5_0004131g0020 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.6e-12 76.6 123 39.8
Rhsim08G0136500 Rhododendron simsii HOM05D000187 ORTHO05D000230 1.6e-12 76.6 125 40.8
VMungo0647G0982 Vigna mungo HOM05D000187 ORTHO05D000230 1.6e-12 76.6 127 40.9
Gorai.013G212300 Gossypium raimondii HOM05D000187 ORTHO05D000230 2.1e-12 76.3 125 42.4
Gohir.A07G001860 Gossypium hirsutum HOM05D000187 ORTHO05D000230 2.7e-12 75.9 90 48.9
Eucgr.C02025 Eucalyptus grandis HOM05D000187 ORTHO05D000230 3.6e-12 75.5 128 39.8
PGSC0003DMG402026315 Solanum tuberosum HOM05D000187 ORTHO05D000230 3.6e-12 75.5 122 40.2
Phvul.001G059300 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 6.1e-12 74.7 128 39.1
Gohir.A13G178200 Gossypium hirsutum HOM05D000187 ORTHO05D000230 7.9e-12 74.3 125 42.4
Hund19408 Selenicereus undatus HOM05D000187 ORTHO05D000230 7.9e-12 74.3 121 38.0
MSTRG.11811 Avicennia marina HOM05D000187 ORTHO05D000230 1.4e-11 73.6 124 33.9
EL10Ac2g03756 Beta vulgaris HOM05D000187 ORTHO05D000230 1.4e-11 73.6 121 39.7
Nitab4.5_0000555g0250 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.4e-11 73.6 118 40.7
SalBow4G1160 Salvia bowleyana HOM05D003678 ORTHO05D004340 1.4e-11 73.6 127 40.2
Peaxi162Scf00288g00818 Petunia axillaris HOM05D000187 ORTHO05D000230 1.8e-11 73.2 123 38.2
MSTRG.25777 Avicennia marina HOM05D000187 ORTHO05D000230 8.8e-11 70.9 128 34.4
Cc00_g05370 Coffea canephora HOM05D000187 ORTHO05D000230 1.5e-10 70.1 131 36.6
THA.LOC104814968 Tarenaya hassleriana HOM05D000187 ORTHO05D000230 1.5e-10 70.1 134 41.0
Gohir.D13G186300 Gossypium hirsutum HOM05D000187 ORTHO05D000230 2.0e-10 69.7 125 40.0
MD08G1128400 Malus domestica HOM05D000187 ORTHO05D000230 1.3e-09 67.0 130 38.5
vmacro17671 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 1.3e-09 67.0 125 36.0
Lalb_Chr11g0064141 Lupinus albus HOM05D000187 ORTHO05D000230 2.2e-09 66.2 104 40.4
PGSC0003DMG400029544 Solanum tuberosum HOM05D000187 ORTHO05D000230 2.2e-09 66.2 128 33.6
Sed0012007 Sechium edule HOM05D000187 ORTHO05D000230 2.8e-09 65.9 131 42.0
Oeu019280.2 Olea europaea HOM05D000187 ORTHO05D000230 8.2e-09 64.3 117 35.0
Lsat_1_v5_gn_5_51261 Lactuca sativa HOM05D000187 ORTHO05D000230 2.4e-08 62.8 124 36.3
PGR044G2093 Punica granatum HOM05D000187 ORTHO05D000230 3.1e-08 62.4 132 40.9
Hma1.2p1_0716F.1_g208100 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 5.3e-08 61.6 124 34.7
Ah.11g043850 Amaranthus hybridus HOM05D000187 ORTHO05D000230 2.6e-07 59.3 120 36.7
THA.LOC104799007 Tarenaya hassleriana HOM05D000187 ORTHO05D000230 3.4e-07 58.9 141 36.2
Oeu008776.2 Olea europaea HOM05D000187 ORTHO05D000230 7.7e-07 57.8 94 36.2
Lj5g0021013 Lotus japonicus HOM05D000187 ORTHO05D000230 1.3e-06 57.0 136 33.8


User provided reference genes

Program Settings