Gene: Sopen08g002410

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g002410
  • Transcript Identifier Sopen08g002410.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 1211155-1213949 : positive

Gene Family Information

  • ID HOM05D000187
  • #Genes/#Species 2054/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g002410.1

Descriptions

  • Description RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051865
ISO
PLAZA Integrative Orthologyprotein autoubiquitination AT5G10650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT5G10650
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G10650
GO:0008017
ISO
PLAZA Integrative Orthologymicrotubule binding AT5G10650

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G10650
GO:0097427
ISO
PLAZA Integrative Orthologymicrotubule bundle AT5G10650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.CTL-subclass ligase