Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0169 Trochodendron aralioides HOM05D005691 ORTHO05D007096 8.5e-131 470.3 232 100.0
Nn1g07449 Nelumbo nucifera HOM05D005691 ORTHO05D007096 1.9e-82 309.7 228 70.2
Dinv07866 Davidia involucrata HOM05D005691 ORTHO05D007096 3.3e-82 308.9 233 68.2
Lj8A134T75 Lonicera japonica HOM05D005691 ORTHO05D007096 2.3e-80 302.8 231 64.9
CSS0040753 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 6.8e-80 301.2 235 63.8
Actinidia21444 Actinidia chinensis HOM05D005691 ORTHO05D007096 2.2e-78 296.2 232 62.9
GSVIVG01030051001 Vitis vinifera HOM05D005691 ORTHO05D007096 2.9e-78 295.8 213 67.6
Manes.12G061100 Manihot esculenta HOM05D005691 ORTHO05D007096 3.7e-78 295.4 234 62.4
MBI16_g26390_MAGBIO Magnolia biondii HOM05D005691 ORTHO05D007096 3.3e-74 282.3 234 61.5
PSO675G5893 Papaver somniferum HOM05D005691 ORTHO05D007096 3.6e-73 278.9 235 59.6
Nitab4.5_0000441g0080 Nicotiana tabacum HOM05D005691 ORTHO05D007096 1.2e-71 273.9 232 60.8
Nitab4.5_0009877g0010 Nicotiana tabacum HOM05D005691 ORTHO05D007096 1.2e-71 273.9 232 60.8
Thecc.01G191500 Theobroma cacao HOM05D005691 ORTHO05D007096 2.0e-71 273.1 235 59.1
Peaxi162Scf00776g00233 Petunia axillaris HOM05D005691 ORTHO05D007096 2.6e-71 272.7 233 61.8
CiPaw.03G279200 Carya illinoinensis HOM05D005691 ORTHO05D007096 9.9e-71 270.8 233 58.8
Rhsim04G0038700 Rhododendron simsii HOM05D005691 ORTHO05D007096 2.2e-70 269.6 235 56.6
Haze_12684 Corylus avellana HOM05D005691 ORTHO05D007096 6.4e-70 268.1 233 60.9
TWI18G1215 Tripterygium wilfordii HOM05D005691 ORTHO05D007096 2.4e-69 266.2 231 58.9
vmacro09398 Vaccinium macrocarpon HOM05D005691 ORTHO05D007096 4.6e-68 261.9 235 56.6
Sc21g0000790 Simmondsia chinensis HOM05D005691 ORTHO05D007096 7.8e-68 261.2 240 57.5
Gohir.A07G191000 Gossypium hirsutum HOM05D005691 ORTHO05D007096 1.7e-67 260.0 235 56.6
PGSC0003DMG400006150 Solanum tuberosum HOM05D005691 ORTHO05D007096 3.0e-67 259.2 235 56.6
Atru.chr6.3368 Acer truncatum HOM05D005691 ORTHO05D007096 3.9e-67 258.8 235 57.9
Ciclev10014054m.g Citrus clementina HOM05D005691 ORTHO05D007096 9.5e-66 254.2 233 57.9
CAN.G854.9 Capsicum annuum HOM05D005691 ORTHO05D007096 1.2e-65 253.8 235 54.9
Prupe.3G200800 Prunus persica HOM05D005691 ORTHO05D007096 6.2e-65 251.5 233 55.4
Oeu029977.1 Olea europaea HOM05D005691 ORTHO05D007096 2.4e-64 249.6 213 60.1
CANSAT64G0049 Cannabis sativa HOM05D005691 ORTHO05D007096 4.0e-64 248.8 233 56.2
QL08p028494 Quercus lobata HOM05D005691 ORTHO05D007096 5.2e-64 248.4 234 56.8
Sopen07g024300 Solanum pennellii HOM05D005691 ORTHO05D007096 2.0e-63 246.5 232 53.9
ECA240G2675 Erigeron canadensis HOM05D005691 ORTHO05D007096 2.6e-63 246.1 228 54.8
AUR62015058 Chenopodium quinoa HOM05D005691 ORTHO05D007096 2.2e-62 243.0 223 55.2
Migut.M00032 Erythranthe guttata HOM05D005691 ORTHO05D007096 2.9e-62 242.7 232 52.6
EL10Ac9g22718 Beta vulgaris HOM05D005691 ORTHO05D007096 6.4e-62 241.5 236 52.5
AUR62017514 Chenopodium quinoa HOM05D005691 ORTHO05D007096 2.4e-61 239.6 223 54.7
MSTRG.6644 Avicennia marina HOM05D005691 ORTHO05D007096 4.1e-61 238.8 226 54.0
HanXRQChr03g0075241 Helianthus annuus HOM05D005691 ORTHO05D007096 9.2e-61 237.7 225 53.3
Cc00_g04460 Coffea canephora HOM05D005691 ORTHO05D007096 1.2e-60 237.3 239 50.2
RcHm_v2.0_Chr2g0156551 Rosa chinensis HOM05D005691 ORTHO05D007096 2.1e-60 236.5 233 54.9
Aqoxy4G02218 Aquilegia oxysepala HOM05D005691 ORTHO05D007096 6.0e-60 235.0 233 53.6
PGR042G3586 Punica granatum HOM05D005691 ORTHO05D007096 3.0e-59 232.6 213 54.5
ClCG02G002780 Citrullus lanatus HOM05D005691 ORTHO05D007096 6.6e-59 231.5 215 51.6
Sed0003649 Sechium edule HOM05D005691 ORTHO05D007096 1.5e-58 230.3 217 53.0
FvH4_6g40930 Fragaria vesca HOM05D005691 ORTHO05D007096 1.9e-58 229.9 234 53.8
FAN14G0170 Fragaria x ananassa HOM05D005691 ORTHO05D007096 1.9e-58 229.9 234 53.8
Potri.002G221300 Populus trichocarpa HOM05D005691 ORTHO05D007096 2.5e-58 229.6 210 55.7
MD17G1113600 Malus domestica HOM05D005691 ORTHO05D007096 3.3e-58 229.2 233 52.8
Sabra02G0169100 Salix brachista HOM05D005691 ORTHO05D007096 3.3e-58 229.2 232 52.2
Hund01594 Selenicereus undatus HOM05D005691 ORTHO05D007096 4.3e-58 228.8 217 56.7
THA.LOC104815358 Tarenaya hassleriana HOM05D005691 ORTHO05D007096 7.3e-58 228.0 231 51.5
Lsat_1_v5_gn_9_104801 Lactuca sativa HOM05D005691 ORTHO05D007096 1.2e-57 227.3 227 53.7
SalBow7G1588 Salvia bowleyana HOM05D005691 ORTHO05D007096 1.2e-57 227.3 213 53.1
FAN09G3499 Fragaria x ananassa HOM05D005691 ORTHO05D007096 1.6e-57 226.9 234 53.4
CsaV3_7G002600 Cucumis sativus L. HOM05D005691 ORTHO05D007096 2.8e-57 226.1 220 52.3
FAN05G1189 Fragaria x ananassa HOM05D005691 ORTHO05D007096 6.2e-57 224.9 234 53.0
arahy.Tifrunner.gnm1.ann1.2CK2M8 Arachis hypogaea HOM05D005691 ORTHO05D007096 1.4e-56 223.8 222 55.4
MELO3C024202.2 Cucumis melo HOM05D005691 ORTHO05D007096 1.4e-56 223.8 220 52.3
arahy.Tifrunner.gnm1.ann1.5BD1HA Arachis hypogaea HOM05D005691 ORTHO05D007096 6.9e-56 221.5 222 54.5
FAN02G1659 Fragaria x ananassa HOM05D005691 ORTHO05D007096 9.0e-56 221.1 234 52.6
Eucgr.A01048 Eucalyptus grandis HOM05D005691 ORTHO05D007096 3.4e-55 219.2 232 49.1
Glyma.02G305200 Glycine max HOM05D005691 ORTHO05D007096 7.6e-55 218.0 213 50.7
Glyma.14G008200 Glycine max HOM05D005691 ORTHO05D007096 7.6e-55 218.0 216 52.3
AL3G42730 Arabidopsis lyrata HOM05D005691 ORTHO05D007096 5.4e-53 211.8 230 48.3
CSS0009966 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 5.4e-53 211.8 171 59.1
Cpa.g.sc211.12 Carica papaya HOM05D005691 ORTHO05D007096 3.5e-52 209.1 167 62.3
LjContig00081g0016683 Lotus japonicus HOM05D005691 ORTHO05D007096 6.0e-52 208.4 213 50.2
Carub.0003s2665 Capsella rubella HOM05D005691 ORTHO05D007096 7.8e-52 208.0 223 48.0
Sp3g23610 Schrenkiella parvula HOM05D005691 ORTHO05D007096 1.0e-51 207.6 231 47.6
VMungo0647G0393 Vigna mungo HOM05D005691 ORTHO05D007096 1.0e-51 207.6 213 51.2
Thhalv10003521m.g Eutrema salsugineum HOM05D005691 ORTHO05D007096 1.1e-50 204.1 232 47.4
Phvul.008G284900 Phaseolus vulgaris HOM05D005691 ORTHO05D007096 1.9e-50 203.4 213 50.7
Hma1.2p1_0133F.1_g061370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 2.5e-50 203.0 177 57.1
DCAR_019708 Daucus carota HOM05D005691 ORTHO05D007096 7.3e-50 201.4 230 47.0
Lalb_Chr10g0107611 Lupinus albus HOM05D005691 ORTHO05D007096 1.3e-49 200.7 213 48.8
ATR1149G135 Amborella trichopoda HOM05D005691 ORTHO05D007096 2.4e-48 196.4 229 47.2
BcaB08g34496 Brassica carinata HOM05D005691 ORTHO05D007096 3.1e-48 196.1 237 48.1
BcaB06g26838 Brassica carinata HOM05D005691 ORTHO05D007096 5.3e-48 195.3 216 48.1
Hma1.2p1_0133F.1_g061380 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 2.0e-47 193.4 165 58.2
COL.COLO4_09230 Corchorus olitorius HOM05D005691 ORTHO05D007096 2.6e-47 193.0 226 48.2
A03p44570 Brassica napus HOM05D005691 ORTHO05D007096 1.7e-46 190.3 231 48.1
BraA03t13590Z Brassica rapa HOM05D005691 ORTHO05D007096 1.7e-46 190.3 231 48.1
SGA_v2.0_scaffold292G47412 Striga asiatica HOM05D005691 ORTHO05D007096 6.4e-46 188.3 216 49.5
BcaC01g03178 Brassica carinata HOM05D005691 ORTHO05D007096 8.4e-46 188.0 229 47.6
C03p55370 Brassica napus HOM05D005691 ORTHO05D007096 8.4e-46 188.0 229 48.9
BolC3t17809H Brassica oleracea HOM05D005691 ORTHO05D007096 8.4e-46 188.0 229 47.6
Medtr5g097260 Medicago truncatula HOM05D005691 ORTHO05D007096 8.4e-46 188.0 215 48.8
TPR.G1235 Trifolium pratense HOM05D005691 ORTHO05D007096 1.1e-45 187.6 229 47.6
Psat2g005000 Pisum sativum HOM05D005691 ORTHO05D007096 1.9e-45 186.8 228 47.8
SEGI_38606 Sequoiadendron giganteum HOM05D005691 ORTHO05D007096 4.2e-45 185.7 218 45.0
Ca_06452_v3 Cicer arietinum L. HOM05D005691 ORTHO05D007096 5.4e-45 185.3 216 45.8
SGA_v2.0_scaffold292G47401 Striga asiatica HOM05D005691 ORTHO05D007096 3.5e-44 182.6 218 46.8
Os03g0225500 Oryza sativa ssp. japonica HOM05D005691 ORTHO05D007096 1.8e-43 180.3 224 43.8
CDE04G3337 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 1.9e-42 176.8 216 44.9
Zm00001eb399630 Zea mays HOM05D005691 ORTHO05D007096 4.5e-39 165.6 227 40.1
unitig_746.g26642 Utricularia gibba HOM05D005691 ORTHO05D007096 5.8e-39 165.2 213 42.3
HPP92_000880 Vanilla planifolia HOM05D005691 ORTHO05D007096 2.8e-33 146.4 175 41.7
SGA_v2.0_scaffold73G24511 Striga asiatica HOM05D005691 ORTHO05D007096 4.5e-31 139.0 146 46.6
BcaC06g35896 Brassica carinata HOM05D005691 ORTHO05D007096 3.3e-26 122.9 218 38.5
Gohir.D07G197400 Gossypium hirsutum HOM05D005691 ORTHO05D007096 2.2e-25 120.2 120 49.2
Gorai.001G221100 Gossypium raimondii HOM05D005691 ORTHO05D007096 3.7e-25 119.4 120 49.2
SalBow7G3724 Salvia bowleyana HOM05D005691 ORTHO05D007096 3.8e-22 109.4 98 53.1
Mapoly0061s0124 Marchantia polymorpha HOM05D005691 ORTHO05D007096 1.9e-21 107.1 218 30.7
SHI10144 Sapria himalayana HOM05D005691 ORTHO05D007096 3.3e-18 96.3 125 40.0
SHI10145 Sapria himalayana HOM05D005691 ORTHO05D007096 2.4e-16 90.1 106 49.1
Hma1.2p1_0133F.1_g061360 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 6.9e-16 88.6 65 73.8
SMO351G0158 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 7.7e-15 85.1 168 31.5
Pp3c21_14430 Physcomitrium patens HOM05D005691 ORTHO05D007096 4.2e-13 79.3 192 28.6
Ah.01g013690 Amaranthus hybridus HOM05D005691 ORTHO05D007096 3.3e-10 69.7 71 59.2
Ah.14g082590 Amaranthus hybridus HOM05D005691 ORTHO05D007096 3.3e-10 69.7 71 59.2
BolC7t41436H Brassica oleracea HOM05D005691 ORTHO05D007096 3.4e-07 59.7 138 37.0


User provided reference genes

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