Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1387 Trochodendron aralioides HOM05D005966 ORTHO05D007584 5.7e-189 664.1 332 100.0
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 5.3e-94 348.6 367 55.9
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 2.6e-72 276.6 367 46.6
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 4.5e-69 265.8 365 46.3
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 4.2e-67 259.2 364 45.1
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 8.9e-65 251.5 369 43.4
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 9.8e-64 248.1 367 43.3
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 9.8e-64 248.1 367 42.8
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 5.4e-62 242.3 366 42.6
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 7.0e-62 241.9 351 45.0
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 2.0e-61 240.4 345 43.8
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 3.8e-60 236.1 357 42.3
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 5.0e-60 235.7 358 41.6
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 5.0e-60 235.7 343 43.7
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 5.0e-60 235.7 366 41.5
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 9.5e-59 231.5 352 42.3
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.2e-58 231.1 367 41.4
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 6.8e-57 225.3 357 41.2
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 6.8e-57 225.3 367 40.9
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 8.9e-57 224.9 398 38.4
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 8.9e-57 224.9 398 38.4
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 1.5e-56 224.2 374 39.6
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.0e-56 223.8 367 40.3
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 3.4e-56 223.0 351 42.7
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 5.8e-56 222.2 361 41.8
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 5.8e-56 222.2 342 42.4
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 9.8e-56 221.5 358 40.8
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 1.7e-55 220.7 342 42.4
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.7e-55 220.7 342 42.4
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 3.7e-55 219.5 342 42.4
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 4.9e-55 219.2 342 42.1
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 8.3e-55 218.4 364 39.8
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 1.4e-54 217.6 399 39.1
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 5.4e-54 215.7 359 40.9
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 2.7e-53 213.4 344 40.4
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 1.7e-52 210.7 357 40.1
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 3.0e-52 209.9 363 40.5
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 3.9e-52 209.5 366 42.1
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 8.6e-52 208.4 354 38.4
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.1e-51 208.0 357 40.6
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.1e-51 208.0 357 39.8
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 2.5e-51 206.8 342 40.4
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 5.6e-51 205.7 353 39.9
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 2.1e-50 203.8 357 39.2
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 4.7e-50 202.6 365 37.5
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 8.0e-50 201.8 366 38.5
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 1.8e-49 200.7 399 36.3
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 3.1e-49 199.9 366 39.1
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 4.0e-49 199.5 357 38.9
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 8.9e-49 198.4 357 38.7
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 1.5e-48 197.6 355 37.7
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 3.7e-47 193.0 345 40.0
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 6.4e-47 192.2 365 36.2
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 2.7e-45 186.8 343 37.6
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 6.6e-44 182.2 343 36.7
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 4.3e-43 179.5 343 36.7
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 9.5e-43 178.3 337 33.8
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 1.2e-42 177.9 343 36.4
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 2.1e-42 177.2 339 36.9
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 2.8e-42 176.8 401 33.9
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 3.6e-42 176.4 344 33.7
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 3.6e-42 176.4 345 35.9
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 6.2e-42 175.6 344 33.7
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 8.1e-42 175.3 356 34.8
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 1.4e-41 174.5 397 35.3
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 1.4e-41 174.5 404 33.4
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 1.8e-41 174.1 396 33.8
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 1.8e-41 174.1 406 33.5
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 4.0e-41 172.9 395 33.9
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 5.2e-41 172.6 397 33.0
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 5.2e-41 172.6 340 35.9
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 2.0e-40 170.6 397 33.0
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.0e-40 170.6 345 36.8
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 2.0e-40 170.6 364 33.5
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 4.4e-40 169.5 398 32.7
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 5.8e-40 169.1 365 34.5
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 1.3e-39 167.9 398 32.4
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 4.9e-39 166.0 327 36.1
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 6.4e-39 165.6 336 37.2
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 6.4e-39 165.6 400 29.8
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 8.3e-39 165.2 364 34.9
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 7.1e-38 162.2 403 32.0
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 1.3e-36 157.9 348 31.9
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 2.3e-36 157.1 328 35.7
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 3.0e-36 156.8 366 33.9
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 8.6e-36 155.2 234 41.0
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 1.1e-35 154.8 356 33.1
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 1.9e-35 154.1 342 34.2
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 9.5e-35 151.8 367 34.9
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 1.6e-34 151.0 366 32.8
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 2.1e-34 150.6 344 30.5
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 3.6e-34 149.8 367 33.0
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 3.6e-34 149.8 348 30.5
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 8.1e-34 148.7 348 33.6
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 1.1e-33 148.3 360 31.7
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 1.8e-33 147.5 357 33.3
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 3.1e-33 146.7 342 33.6
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 3.1e-33 146.7 364 31.9
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 1.2e-32 144.8 340 32.9
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 1.2e-32 144.8 366 31.7
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 2.6e-32 143.7 366 31.4
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 3.5e-29 133.3 327 31.5
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 2.3e-28 130.6 356 29.8
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 9.0e-25 118.6 371 29.4
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 1.5e-24 117.9 396 28.8
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 3.4e-24 116.7 369 28.2
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 1.9e-22 110.9 322 31.4
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 1.2e-21 108.2 373 26.3
CAN.G925.3 Capsicum annuum HOM05D005966 ORTHO05D007584 2.0e-08 64.3 54 53.7
Hma1.2p1_0090F.1_g045710 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 1.3e-07 61.6 49 57.1
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 4.2e-06 56.6 30 90.0


User provided reference genes

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