Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0733 Trochodendron aralioides HOM05D004186 ORTHO05D006965 1.3e-287 992.3 480 100.0
TAR636G1430 Trochodendron aralioides HOM05D004186 ORTHO05D006965 3.2e-273 944.5 480 93.8
Dinv42759 Davidia involucrata HOM05D004186 ORTHO05D006965 1.4e-265 919.1 480 91.7
Dinv43343 Davidia involucrata HOM05D004186 ORTHO05D006965 1.4e-265 919.1 480 91.7
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla HOM05D004186 ORTHO05D006965 1.2e-259 899.4 481 90.2
CiPaw.08G037900 Carya illinoinensis HOM05D004186 ORTHO05D006965 7.6e-259 896.7 480 89.0
GSVIVG01029114001 Vitis vinifera HOM05D004186 ORTHO05D006965 1.7e-258 895.6 481 89.8
Manes.06G027600 Manihot esculenta HOM05D004186 ORTHO05D006965 2.9e-258 894.8 480 88.5
PSO063G2639 Papaver somniferum HOM05D004186 ORTHO05D006965 8.4e-258 893.3 480 89.2
Oeu054233.2 Olea europaea HOM05D004186 ORTHO05D006965 1.4e-257 892.5 480 87.7
Potri.018G096049 Populus trichocarpa HOM05D004186 ORTHO05D006965 2.1e-256 888.6 480 88.1
CSS0041373 Camellia sinensis var. sinensis HOM05D004186 ORTHO05D006965 1.7e-255 885.6 480 88.3
Duzib034G0005 Durio zibethinus HOM05D004186 ORTHO05D006965 1.7e-255 885.6 478 88.7
Thecc.10G167400 Theobroma cacao HOM05D004186 ORTHO05D006965 1.1e-254 882.9 478 88.3
MD16G1265900 Malus domestica HOM05D004186 ORTHO05D006965 2.5e-254 881.7 481 88.1
Duzib114G0309 Durio zibethinus HOM05D004186 ORTHO05D006965 9.6e-254 879.8 478 88.1
Duzib128G0608 Durio zibethinus HOM05D004186 ORTHO05D006965 2.1e-253 878.6 478 88.3
RcHm_v2.0_Chr4g0403601 Rosa chinensis HOM05D004186 ORTHO05D006965 2.1e-253 878.6 480 87.7
PSO782G1691 Papaver somniferum HOM05D004186 ORTHO05D006965 8.1e-253 876.7 480 88.1
TWI32G0580 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 1.4e-252 875.9 480 87.3
RhsimUnG0079700 Rhododendron simsii HOM05D004186 ORTHO05D006965 1.8e-252 875.5 487 86.7
Gohir.A05G280700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 2.4e-252 875.2 478 86.6
CANSAT11G0657 Cannabis sativa HOM05D004186 ORTHO05D006965 3.1e-252 874.8 480 86.2
Gorai.009G296100 Gossypium raimondii HOM05D004186 ORTHO05D006965 5.3e-252 874.0 478 86.4
Prupe.1G091900 Prunus persica HOM05D004186 ORTHO05D006965 9.0e-252 873.2 481 87.3
QL02p096850 Quercus lobata HOM05D004186 ORTHO05D006965 1.2e-251 872.8 479 87.3
Atru.chr7.741 Acer truncatum HOM05D004186 ORTHO05D006965 2.0e-251 872.1 480 87.5
Migut.K00260 Erythranthe guttata HOM05D004186 ORTHO05D006965 2.0e-251 872.1 480 86.0
Gohir.D05G282700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 3.4e-251 871.3 477 86.6
Sed0027081 Sechium edule HOM05D004186 ORTHO05D006965 3.4e-251 871.3 480 87.3
CDE04G0897 Ceratophyllum demersum HOM05D004186 ORTHO05D006965 5.8e-251 870.5 475 87.2
ECA236G4107 Erigeron canadensis HOM05D004186 ORTHO05D006965 5.8e-251 870.5 480 86.0
FvH4_4g32520 Fragaria vesca HOM05D004186 ORTHO05D006965 2.2e-250 868.6 480 86.0
Cc06_g13640 Coffea canephora HOM05D004186 ORTHO05D006965 4.9e-250 867.5 480 85.6
Rhsim01G0008400 Rhododendron simsii HOM05D004186 ORTHO05D006965 4.9e-250 867.5 483 86.7
Actinidia04122 Actinidia chinensis HOM05D004186 ORTHO05D006965 2.4e-249 865.1 480 85.6
FAN12G1387 Fragaria x ananassa HOM05D004186 ORTHO05D006965 2.4e-249 865.1 484 85.7
Sopen07g002760 Solanum pennellii HOM05D004186 ORTHO05D006965 4.2e-249 864.4 477 84.7
Lsat_1_v5_gn_8_66460 Lactuca sativa HOM05D004186 ORTHO05D006965 5.4e-249 864.0 479 84.1
Solyc07g006650.4 Solanum lycopersicum HOM05D004186 ORTHO05D006965 5.4e-249 864.0 477 84.5
Manes.02G134800 Manihot esculenta HOM05D004186 ORTHO05D006965 1.6e-248 862.4 480 85.2
CiPaw.07G189100 Carya illinoinensis HOM05D004186 ORTHO05D006965 7.9e-248 860.1 473 87.1
HanXRQChr05g0136751 Helianthus annuus HOM05D004186 ORTHO05D006965 1.0e-247 859.8 483 83.4
Migut.J01448 Erythranthe guttata HOM05D004186 ORTHO05D006965 1.3e-247 859.4 480 84.2
DCAR_017956 Daucus carota HOM05D004186 ORTHO05D006965 1.5e-246 855.9 480 84.2
SGA_v2.0_scaffold69G23283 Striga asiatica HOM05D004186 ORTHO05D006965 1.9e-246 855.5 480 83.5
Lj4g0000380 Lotus japonicus HOM05D004186 ORTHO05D006965 2.5e-246 855.1 481 85.9
ATR0580G261 Amborella trichopoda HOM05D004186 ORTHO05D006965 3.3e-246 854.7 481 84.6
PGSC0003DMG400027477 Solanum tuberosum HOM05D004186 ORTHO05D006965 4.3e-246 854.4 477 84.5
Cpa.g.sc75.2 Carica papaya HOM05D004186 ORTHO05D006965 7.4e-246 853.6 480 84.0
Ca_21198_v3 Cicer arietinum L. HOM05D004186 ORTHO05D006965 3.7e-245 851.3 481 85.2
Ciclev10008154m.g Citrus clementina HOM05D004186 ORTHO05D006965 4.8e-245 850.9 480 83.8
HPP92_013702 Vanilla planifolia HOM05D004186 ORTHO05D006965 2.4e-244 848.6 476 84.9
Eucgr.G01193 Eucalyptus grandis HOM05D004186 ORTHO05D006965 6.9e-244 847.0 496 83.3
Cpa.g.sc95.75 Carica papaya HOM05D004186 ORTHO05D006965 9.0e-244 846.7 480 83.8
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 1.2e-243 846.3 482 84.2
SalBow6G3740 Salvia bowleyana HOM05D004186 ORTHO05D006965 1.2e-243 846.3 486 81.9
ClCG11G012460 Citrullus lanatus HOM05D004186 ORTHO05D006965 2.0e-243 845.5 480 83.8
CsaV3_2G008080 Cucumis sativus L. HOM05D004186 ORTHO05D006965 4.5e-243 844.3 480 84.4
Lj9A689G39 Lonicera japonica HOM05D004186 ORTHO05D006965 9.9e-243 843.2 461 86.6
Glyma.17G066200 Glycine max HOM05D004186 ORTHO05D006965 1.3e-242 842.8 481 85.0
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 1.7e-242 842.4 481 84.0
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 2.2e-242 842.0 478 84.7
Nitab4.5_0001212g0070 Nicotiana tabacum HOM05D004186 ORTHO05D006965 2.2e-242 842.0 443 88.7
VMungo1215G1034 Vigna mungo HOM05D004186 ORTHO05D006965 6.4e-242 840.5 481 84.2
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 1.9e-241 839.0 481 82.7
Sc08g0005470 Simmondsia chinensis HOM05D004186 ORTHO05D006965 1.9e-241 839.0 480 82.3
EL10Ac8g18262 Beta vulgaris HOM05D004186 ORTHO05D006965 2.5e-241 838.6 473 85.0
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 3.2e-241 838.2 481 82.7
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 3.2e-241 838.2 481 83.2
TPR.G5301 Trifolium pratense HOM05D004186 ORTHO05D006965 3.2e-241 838.2 481 83.6
MSTRG.19694 Avicennia marina HOM05D004186 ORTHO05D006965 4.2e-241 837.8 480 81.7
Os07g0669100 Oryza sativa ssp. japonica HOM05D004186 ORTHO05D006965 5.5e-241 837.4 478 83.3
Nitab4.5_0000244g0180 Nicotiana tabacum HOM05D004186 ORTHO05D006965 7.1e-241 837.0 441 88.4
Phvul.003G148700 Phaseolus vulgaris HOM05D004186 ORTHO05D006965 7.1e-241 837.0 481 84.2
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 9.3e-241 836.6 481 83.0
Lalb_Chr11g0072331 Lupinus albus HOM05D004186 ORTHO05D006965 9.3e-241 836.6 481 84.0
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 1.2e-240 836.3 481 82.3
AUR62039990 Chenopodium quinoa HOM05D004186 ORTHO05D006965 2.1e-240 835.5 473 84.4
BcaB08g36123 Brassica carinata HOM05D004186 ORTHO05D006965 3.5e-240 834.7 481 82.7
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 3.5e-240 834.7 481 83.2
AUR62040296 Chenopodium quinoa HOM05D004186 ORTHO05D006965 4.6e-240 834.3 473 84.1
MELO3C004075.2 Cucumis melo HOM05D004186 ORTHO05D006965 4.6e-240 834.3 481 83.4
Zm00001eb330180 Zea mays HOM05D004186 ORTHO05D006965 1.0e-239 833.2 460 85.4
AL8G33680 Arabidopsis lyrata HOM05D004186 ORTHO05D006965 1.3e-239 832.8 474 83.5
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea HOM05D004186 ORTHO05D006965 1.3e-239 832.8 481 84.2
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 1.8e-239 832.4 481 82.7
Medtr4g128840 Medicago truncatula HOM05D004186 ORTHO05D006965 2.3e-239 832.0 481 82.7
THA.LOC104813530 Tarenaya hassleriana HOM05D004186 ORTHO05D006965 5.1e-239 830.9 481 83.2
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 1.5e-238 829.3 489 81.6
Peaxi162Scf00942g00127 Petunia axillaris HOM05D004186 ORTHO05D006965 4.3e-238 827.8 479 83.5
FAN22G1241 Fragaria x ananassa HOM05D004186 ORTHO05D006965 6.2e-237 823.9 493 81.5
Zm00001eb111020 Zea mays HOM05D004186 ORTHO05D006965 6.2e-237 823.9 455 84.6
Psat0ss9363g0320 Pisum sativum HOM05D004186 ORTHO05D006965 1.4e-236 822.8 507 79.5
CAN.G584.24 Capsicum annuum HOM05D004186 ORTHO05D006965 3.1e-236 821.6 478 82.0
Ah.14g083970 Amaranthus hybridus HOM05D004186 ORTHO05D006965 1.5e-235 819.3 480 82.3
Aa31LG3G13490 Aethionema arabicum HOM05D004186 ORTHO05D006965 2.2e-234 815.5 489 80.2
MBI14_g39543_MAGBIO Magnolia biondii HOM05D004186 ORTHO05D006965 3.9e-231 804.7 475 81.7
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea HOM05D004186 ORTHO05D006965 1.8e-228 795.8 506 78.5
Gohir.A06G175800 Gossypium hirsutum HOM05D004186 ORTHO05D006965 2.9e-226 788.5 478 79.5
FAN07G2198 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.0e-223 780.0 501 77.2
Haze_22131 Corylus avellana HOM05D004186 ORTHO05D006965 5.1e-223 777.7 508 77.2
Nn2g12639 Nelumbo nucifera HOM05D004186 ORTHO05D006965 1.1e-222 776.5 480 79.6
Hund26412 Selenicereus undatus HOM05D004186 ORTHO05D006965 6.3e-221 770.8 461 81.1
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea HOM05D004186 ORTHO05D006965 9.1e-220 766.9 481 77.8
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea HOM05D004186 ORTHO05D006965 1.5e-219 766.1 481 78.2
vmacro13097 Vaccinium macrocarpon HOM05D004186 ORTHO05D006965 7.4e-214 747.3 495 76.4
Dinv41278 Davidia involucrata HOM05D004186 ORTHO05D006965 3.5e-211 738.4 385 89.1
Pp3c6_6020 Physcomitrium patens HOM05D004186 ORTHO05D006965 1.3e-205 719.9 473 72.1
Mapoly0030s0071 Marchantia polymorpha HOM05D004186 ORTHO05D006965 2.8e-205 718.8 464 72.4
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis HOM05D004186 ORTHO05D006965 1.6e-203 713.0 472 73.1
SMO259G0020 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 9.4e-201 703.7 475 70.5
Oeu052240.1 Olea europaea HOM05D004186 ORTHO05D006965 1.6e-200 703.0 483 72.7
unitig_26.g9078 Utricularia gibba HOM05D004186 ORTHO05D006965 7.7e-187 657.5 466 70.2
Gohir.D06G185466 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.4e-180 636.7 370 80.0
Gorai.010G217000 Gossypium raimondii HOM05D004186 ORTHO05D006965 1.0e-178 630.6 370 79.7
Hund09010 Selenicereus undatus HOM05D004186 ORTHO05D006965 5.0e-178 628.2 461 68.8
Aqoxy7G03142 Aquilegia oxysepala HOM05D004186 ORTHO05D006965 6.4e-173 611.3 480 66.2
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 4.3e-153 545.4 304 83.9
SalBow6G1169 Salvia bowleyana HOM05D004186 ORTHO05D006965 6.8e-151 538.1 407 67.6
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 8.7e-146 521.2 304 81.2
arahy.Tifrunner.gnm1.ann1.6S67WQ Arachis hypogaea HOM05D004186 ORTHO05D006965 1.3e-144 517.3 281 87.9
arahy.Tifrunner.gnm1.ann1.LBE3WY Arachis hypogaea HOM05D004186 ORTHO05D006965 2.4e-143 513.1 275 88.4
MCO08G279 Micromonas commoda HOM05D004186 ORTHO05D006965 6.0e-139 498.4 410 61.0
PRCOL_00002845 Prasinoderma coloniale HOM05D004186 ORTHO05D006965 1.9e-137 493.4 467 53.3
MD13G1265000 Malus domestica HOM05D004186 ORTHO05D006965 4.8e-136 488.8 309 79.0
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 1.1e-129 467.6 308 74.4
SEGI_37950 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 7.9e-107 391.7 230 79.6
TWI34G1113 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 1.1e-105 387.9 211 88.6
SEGI_15575 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 5.9e-102 375.6 228 77.2
SEGI_36533 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 5.9e-102 375.6 228 77.2
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 2.7e-99 366.7 419 49.4
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 7.2e-92 342.0 466 45.3
MD13G1264900 Malus domestica HOM05D004186 ORTHO05D006965 2.3e-90 337.0 200 82.0
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 9.1e-79 298.5 430 44.0
SalBow6G2747 Salvia bowleyana HOM05D004186 ORTHO05D015971 1.6e-75 287.7 149 86.6
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 2.4e-71 273.9 182 72.0
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 1.6e-70 271.2 182 71.4
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea HOM05D004186 ORTHO05D015971 2.6e-65 253.8 179 69.3
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea HOM05D004186 ORTHO05D015971 3.4e-65 253.4 179 69.3
Rhsim01G0008600 Rhododendron simsii HOM05D004186 ORTHO05D015971 2.6e-49 200.7 99 89.9
RhsimUnG0079500 Rhododendron simsii HOM05D004186 ORTHO05D015971 2.6e-49 200.7 99 89.9
A02p08340 Brassica napus HOM05D004186 ORTHO05D006965 6.0e-46 189.5 111 79.3
SMO181G0029 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 1.7e-37 161.4 105 72.4
HanXRQChr09g0269751 Helianthus annuus HOM05D004186 ORTHO05D015971 2.3e-37 161.0 97 76.3
FAN17G2491 Fragaria x ananassa HOM05D004186 ORTHO05D006965 8.6e-37 159.1 95 85.3
RcHm_v2.0_Chr5g0046871 Rosa chinensis HOM05D004186 ORTHO05D015971 3.1e-34 150.6 81 82.7
TAR383G0623 Trochodendron aralioides HOM05D004186 ORTHO05D415797 8.9e-34 149.1 92 78.3
RcHm_v2.0_Chr5g0036521 Rosa chinensis HOM05D004186 ORTHO05D015971 3.5e-30 137.1 77 81.8
Zm00001eb265380 Zea mays HOM05D004186 ORTHO05D008381 3.0e-21 107.5 56 85.7
Ah.08g214930 Amaranthus hybridus HOM05D004186 ORTHO05D061406 1.9e-20 104.8 135 40.7
Zm00001eb101000 Zea mays HOM05D004186 ORTHO05D000030 1.9e-20 104.8 65 72.3
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 3.4e-17 94.0 72 66.7
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 3.4e-17 94.0 72 66.7
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 1.4e-15 88.6 78 55.1
Atru.chr3.336 Acer truncatum HOM05D004186 ORTHO05D006037 5.5e-15 86.7 46 89.1
Sc14g0005990 Simmondsia chinensis HOM05D004186 ORTHO05D039000 9.3e-15 85.9 45 84.4
SalBow7G3706 Salvia bowleyana HOM05D004186 ORTHO05D352404 6.7e-13 79.7 72 59.7
EL10Ac2g04384 Beta vulgaris HOM05D004186 ORTHO05D039000 1.4e-10 72.0 34 88.2
Lsat_1_v5_gn_9_37000 Lactuca sativa HOM05D004186 ORTHO05D011383 1.4e-10 72.0 58 58.6
C08p17140 Brassica napus HOM05D004186 ORTHO05D011383 1.5e-09 68.6 58 58.6
BolC8t49341H Brassica oleracea HOM05D004186 ORTHO05D011383 1.5e-09 68.6 58 58.6
C03p16540 Brassica napus HOM05D004186 ORTHO05D011383 1.0e-08 65.9 79 48.1
C07p46470 Brassica napus HOM05D001159 ORTHO05D011383 1.3e-08 65.5 58 56.9
BcaC01g06364 Brassica carinata HOM05D004186 ORTHO05D011383 2.2e-08 64.7 84 44.0
BolC7t45165H Brassica oleracea HOM05D001159 ORTHO05D011383 1.1e-07 62.4 58 56.9
BcaC05g27566 Brassica carinata HOM05D001159 ORTHO05D011383 1.9e-07 61.6 58 55.2
C05p35490 Brassica napus HOM05D001159 ORTHO05D011383 1.9e-07 61.6 58 55.2
BcaC07g38783 Brassica carinata HOM05D002592 ORTHO05D011383 2.5e-07 61.2 51 58.8
C09p03000 Brassica napus HOM05D001159 ORTHO05D011383 2.5e-07 61.2 58 53.4
BolC9t53230H Brassica oleracea HOM05D001159 ORTHO05D011383 2.5e-07 61.2 58 53.4
SGA_v2.0_scaffold66G22476 Striga asiatica HOM05D004186 ORTHO05D405288 5.5e-07 60.1 34 82.4
HanXRQChr10g0284771 Helianthus annuus HOM05D004748 ORTHO05D005825 1.2e-06 58.9 64 53.1
BcaC01g06358 Brassica carinata HOM05D004186 ORTHO05D011383 7.9e-06 56.2 63 47.6


User provided reference genes

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