Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 2.4e-102 375.6 196 100.0
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 6.4e-79 297.7 184 86.4
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 3.3e-75 285.4 197 76.6
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 7.5e-72 274.2 201 77.1
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 9.8e-72 273.9 196 74.0
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 9.8e-72 273.9 196 74.0
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 2.9e-71 272.3 194 71.1
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 1.4e-70 270.0 196 74.0
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 2.4e-70 269.2 196 73.5
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 7.8e-69 264.2 196 71.9
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 1.0e-68 263.8 196 71.9
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 6.6e-68 261.2 195 71.8
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 6.6e-68 261.2 195 71.8
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 2.5e-67 259.2 196 69.9
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.5e-67 259.2 196 72.4
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 4.3e-67 258.5 196 73.0
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 7.3e-67 257.7 197 72.6
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 9.5e-67 257.3 200 72.5
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 1.2e-66 256.9 195 71.3
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.6e-66 256.5 189 71.4
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 2.8e-66 255.8 197 70.1
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 6.2e-66 254.6 195 69.2
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 8.1e-66 254.2 196 70.4
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.4e-65 253.4 196 72.4
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 1.8e-65 253.1 196 69.9
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 3.1e-65 252.3 196 67.9
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 3.1e-65 252.3 196 68.4
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 4.0e-65 251.9 196 70.9
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 8.9e-65 250.8 194 70.6
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 1.5e-64 250.0 197 69.5
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 1.5e-64 250.0 188 70.7
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 3.4e-64 248.8 196 65.8
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 7.5e-64 247.7 194 68.6
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 2.2e-63 246.1 195 68.2
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 2.9e-63 245.7 196 68.9
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 3.7e-63 245.4 195 69.7
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 3.7e-63 245.4 195 68.7
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 6.4e-63 244.6 194 68.6
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 1.1e-62 243.8 196 66.8
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 1.1e-62 243.8 194 68.0
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 4.1e-62 241.9 194 66.0
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.2e-61 240.4 196 65.3
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.6e-61 240.0 195 68.2
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 2.1e-61 239.6 196 67.3
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 3.0e-60 235.7 196 66.3
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 3.0e-60 235.7 194 67.0
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 3.9e-60 235.3 195 66.7
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.5e-59 233.4 196 67.3
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 2.5e-59 232.6 196 65.8
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 3.3e-59 232.3 196 65.8
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 5.6e-59 231.5 197 65.5
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 9.5e-59 230.7 194 64.9
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.2e-58 230.3 199 65.8
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.2e-58 230.3 196 65.3
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 2.1e-58 229.6 185 66.5
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 3.6e-58 228.8 184 66.3
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 3.6e-58 228.8 184 69.0
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 3.6e-58 228.8 199 65.8
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 4.7e-58 228.4 196 64.3
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.8e-57 226.5 196 64.3
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 8.9e-57 224.2 196 63.8
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 2.0e-56 223.0 195 62.6
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 6.4e-55 218.0 196 63.3
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 8.4e-55 217.6 196 59.7
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 1.4e-54 216.9 195 63.1
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 3.2e-54 215.7 195 61.5
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 5.4e-54 214.9 200 61.0
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 2.1e-53 213.0 195 61.0
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.7e-53 212.6 191 60.2
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 2.7e-53 212.6 197 60.4
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 6.0e-53 211.5 196 62.8
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 2.3e-52 209.5 194 60.3
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 3.9e-52 208.8 180 67.2
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 3.9e-52 208.8 183 63.4
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 5.1e-52 208.4 194 62.4
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 1.9e-51 206.5 194 61.3
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 1.9e-51 206.5 197 59.9
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 1.9e-51 206.5 197 59.9
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 7.3e-51 204.5 195 60.0
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 1.6e-50 203.4 178 61.8
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 1.6e-50 203.4 195 57.4
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 2.1e-50 203.0 190 60.5
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 2.1e-50 203.0 173 61.8
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 3.6e-50 202.2 197 61.4
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 3.6e-50 202.2 150 71.3
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 6.2e-50 201.4 194 58.8
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 6.2e-50 201.4 194 59.8
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 5.3e-49 198.4 195 60.5
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 5.3e-49 198.4 217 55.8
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 9.0e-49 197.6 196 55.1
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.2e-48 197.2 196 57.7
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 3.4e-48 195.7 196 54.6
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 9.9e-48 194.1 194 59.3
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.3e-47 193.7 150 67.3
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 1.9e-46 189.9 194 54.6
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 1.3e-44 183.7 202 52.0
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 4.3e-43 178.7 196 52.0
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.8e-41 173.3 191 50.8
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 5.3e-41 171.8 147 64.6
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 2.0e-40 169.9 196 51.5
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 3.4e-40 169.1 189 50.3
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.3e-39 167.2 209 45.5
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 2.4e-38 162.9 197 50.3
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 3.2e-38 162.5 150 64.0
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 2.7e-37 159.5 196 50.0
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 3.5e-37 159.1 197 49.2
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 8.7e-36 154.5 189 48.1
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 8.1e-34 147.9 196 45.9
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 1.4e-33 147.1 206 43.2
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 2.4e-33 146.4 225 43.6
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 4.0e-33 145.6 191 44.5
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 4.5e-32 142.1 119 67.2
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 5.8e-32 141.7 113 67.3
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 7.6e-32 141.4 196 42.9
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 7.6e-32 141.4 196 42.9
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 2.9e-31 139.4 144 56.2
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 3.2e-30 136.0 209 45.5
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 4.2e-30 135.6 196 42.3
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 1.6e-29 133.7 83 81.9
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 3.9e-28 129.0 74 89.2
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 1.1e-27 127.5 90 72.2
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.9e-27 126.7 83 75.9
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 4.3e-27 125.6 83 74.7
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 5.6e-27 125.2 150 49.3
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 9.6e-27 124.4 151 49.7
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 1.8e-25 120.2 173 42.8
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 2.4e-25 119.8 84 65.5
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 4.6e-21 105.5 90 62.2
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 1.9e-19 100.1 162 42.6
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.9e-19 100.1 103 59.2
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 6.3e-18 95.1 75 69.3
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 1.8e-17 93.6 76 67.1
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 9.0e-17 91.3 73 60.3
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 1.0e-15 87.8 70 60.0
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.3e-15 87.4 86 53.5
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 7.2e-14 81.6 54 79.6
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 7.2e-14 81.6 140 42.1
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 1.8e-12 77.0 197 34.0
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 5.7e-11 72.0 54 61.1
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 3.7e-10 69.3 182 32.4
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 6.3e-10 68.6 77 53.2
CiPaw.15G164900 Carya illinoinensis HOM05D005762 ORTHO05D006823 1.1e-09 67.8 93 45.2


User provided reference genes

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