Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0068 Trochodendron aralioides HOM05D006258 ORTHO05D007961 7.1e-71 271.2 218 100.0
CiPaw.16G107200 Carya illinoinensis HOM05D006258 ORTHO05D007961 2.9e-40 169.5 204 80.4
Haze_19146 Corylus avellana HOM05D006258 ORTHO05D007961 3.2e-39 166.0 205 79.0
DCAR_020087 Daucus carota HOM05D006258 ORTHO05D007961 1.2e-38 164.1 217 71.4
BcaC09g51872 Brassica carinata HOM05D006258 ORTHO05D007961 1.3e-37 160.6 205 65.9
BolC1t00798H Brassica oleracea HOM05D006258 ORTHO05D007961 1.3e-37 160.6 205 65.9
C01p08100 Brassica napus HOM05D006258 ORTHO05D007961 3.0e-37 159.5 205 65.4
BraA01t00683Z Brassica rapa HOM05D006258 ORTHO05D007961 9.7e-36 154.5 205 62.9
AT4G30825 Arabidopsis thaliana HOM05D006258 ORTHO05D007961 4.8e-35 152.1 204 72.1
A01p07350 Brassica napus HOM05D006258 ORTHO05D007961 4.8e-35 152.1 205 61.5
AUR62028365 Chenopodium quinoa HOM05D006258 ORTHO05D007961 6.3e-35 151.8 203 75.9
AUR62025364 Chenopodium quinoa HOM05D006258 ORTHO05D007961 2.4e-34 149.8 203 76.4
HanXRQChr03g0066041 Helianthus annuus HOM05D006258 ORTHO05D007961 2.4e-34 149.8 205 78.0
EL10Ac8g18915 Beta vulgaris HOM05D006258 ORTHO05D007961 5.3e-34 148.7 203 75.4
Glyma.04G155800 Glycine max HOM05D006258 ORTHO05D007961 6.9e-34 148.3 206 43.7
SGA_v2.0_scaffold45G17009 Striga asiatica HOM05D006258 ORTHO05D007961 7.7e-33 144.8 205 72.2
Manes.14G112800 Manihot esculenta HOM05D006258 ORTHO05D007961 1.0e-32 144.4 205 73.2
Aqoxy7G02393 Aquilegia oxysepala HOM05D006258 ORTHO05D007961 1.7e-32 143.7 83 83.1
Nn8g40038 Nelumbo nucifera HOM05D006258 ORTHO05D007961 1.7e-32 143.7 84 79.8
Dinv42824 Davidia involucrata HOM05D006258 ORTHO05D007961 5.0e-32 142.1 83 79.5
Dinv43276 Davidia involucrata HOM05D006258 ORTHO05D007961 5.0e-32 142.1 83 79.5
Prupe.7G266300 Prunus persica HOM05D006258 ORTHO05D007961 8.5e-32 141.4 84 77.4
MSTRG.19663 Avicennia marina HOM05D006258 ORTHO05D007961 1.4e-31 140.6 217 67.3
MD15G1148600 Malus domestica HOM05D006258 ORTHO05D007961 3.2e-31 139.4 84 75.0
Atru.chr7.3 Acer truncatum HOM05D006258 ORTHO05D007961 7.2e-31 138.3 84 78.6
QL02p094105 Quercus lobata HOM05D006258 ORTHO05D007961 1.2e-30 137.5 205 71.7
PSO017G5475 Papaver somniferum HOM05D006258 ORTHO05D007961 3.6e-30 136.0 96 65.6
Actinidia20935 Actinidia chinensis HOM05D006258 ORTHO05D007961 3.0e-29 132.9 83 77.1
Migut.J01390 Erythranthe guttata HOM05D006258 ORTHO05D007961 1.1e-28 131.0 205 65.4
Rhsim01G0025000 Rhododendron simsii HOM05D006258 ORTHO05D007961 1.1e-28 131.0 194 70.6
MBI15_g27201_MAGBIO Magnolia biondii HOM05D006258 ORTHO05D007961 2.0e-28 130.2 84 72.6
PSO170G6770 Papaver somniferum HOM05D006258 ORTHO05D007961 2.6e-28 129.8 84 71.4
CARHR238690 Cardamine hirsuta HOM05D006258 ORTHO05D007961 3.3e-28 129.4 204 69.6
FvH4_1g00580 Fragaria vesca HOM05D006258 ORTHO05D007961 4.4e-28 129.0 84 69.0
FAN26G2355 Fragaria x ananassa HOM05D006258 ORTHO05D007961 4.4e-28 129.0 84 69.0
FAN28G2306 Fragaria x ananassa HOM05D006258 ORTHO05D007961 4.4e-28 129.0 84 69.0
Lj9P721T44 Lonicera japonica HOM05D006258 ORTHO05D007961 4.4e-28 129.0 96 66.7
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 5.7e-28 128.6 84 76.2
CSS0048528 Camellia sinensis var. sinensis HOM05D006258 ORTHO05D007961 7.4e-28 128.3 81 77.8
CANSAT11G0498 Cannabis sativa HOM05D006258 ORTHO05D007961 7.4e-28 128.3 204 71.6
Ciclev10007430m.g Citrus clementina HOM05D006258 ORTHO05D007961 1.7e-27 127.1 84 71.4
Cpa.g.sc199.25 Carica papaya HOM05D006258 ORTHO05D007961 2.8e-27 126.3 192 72.4
Rhsim01G0024600 Rhododendron simsii HOM05D006258 ORTHO05D007961 4.8e-27 125.6 84 75.0
Thecc.09G153300 Theobroma cacao HOM05D006258 ORTHO05D007961 4.8e-27 125.6 84 73.8
Duzib168G2382 Durio zibethinus HOM05D006258 ORTHO05D007961 8.2e-27 124.8 84 72.6
Potri.006G005100 Populus trichocarpa HOM05D006258 ORTHO05D007961 8.2e-27 124.8 84 67.9
Ca_02705_v3 Cicer arietinum L. HOM05D006258 ORTHO05D007961 1.1e-26 124.4 206 42.7
Oeu055282.2 Olea europaea HOM05D006258 ORTHO05D007961 3.1e-26 122.9 96 57.3
Carub.0007s0974 Capsella rubella HOM05D006258 ORTHO05D007961 6.9e-26 121.7 204 68.1
arahy.Tifrunner.gnm1.ann1.MTM7TL Arachis hypogaea HOM05D006258 ORTHO05D007961 9.1e-26 121.3 207 69.6
Sabra06G0004300 Salix brachista HOM05D006258 ORTHO05D007961 9.1e-26 121.3 83 67.5
ATR0739G146 Amborella trichopoda HOM05D006258 ORTHO05D007961 1.2e-25 120.9 83 71.1
Sed0027468 Sechium edule HOM05D006258 ORTHO05D007961 1.5e-25 120.6 205 65.9
VMungo0464G1023 Vigna mungo HOM05D006258 ORTHO05D007961 1.5e-25 120.6 206 53.9
Lsat_1_v5_gn_7_49581 Lactuca sativa HOM05D006258 ORTHO05D007961 2.0e-25 120.2 207 72.5
Lalb_Chr06g0172791 Lupinus albus HOM05D006258 ORTHO05D007961 2.6e-25 119.8 84 65.5
arahy.Tifrunner.gnm1.ann1.FEEJ53 Arachis hypogaea HOM05D006258 ORTHO05D007961 3.4e-25 119.4 207 69.1
MELO3C010202.2 Cucumis melo HOM05D006258 ORTHO05D007961 3.4e-25 119.4 84 66.7
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 3.4e-25 119.4 83 69.9
Gohir.D08G099500 Gossypium hirsutum HOM05D006258 ORTHO05D007961 4.5e-25 119.0 84 67.9
Gorai.004G107200 Gossypium raimondii HOM05D006258 ORTHO05D007961 4.5e-25 119.0 84 67.9
Thhalv10024344m.g Eutrema salsugineum HOM05D006258 ORTHO05D007961 1.0e-24 117.9 189 71.4
TPR.G15324 Trifolium pratense HOM05D006258 ORTHO05D007961 1.3e-24 117.5 206 54.9
CsaV3_1G029170 Cucumis sativus L. HOM05D006258 ORTHO05D007961 1.7e-24 117.1 84 65.5
Aa31LG2G19560 Aethionema arabicum HOM05D006258 ORTHO05D007961 5.0e-24 115.5 96 54.2
Gohir.A08G088300 Gossypium hirsutum HOM05D006258 ORTHO05D007961 5.0e-24 115.5 84 67.9
Medtr2g058580 Medicago truncatula HOM05D006258 ORTHO05D007961 8.5e-24 114.8 206 42.2
PGR142G1283 Punica granatum HOM05D006258 ORTHO05D007961 2.5e-23 113.2 83 66.3
CDE02G4246 Ceratophyllum demersum HOM05D006258 ORTHO05D007961 3.2e-23 112.8 96 52.1
Ah.09g228710 Amaranthus hybridus HOM05D006258 ORTHO05D007961 9.4e-23 111.3 83 62.7
GSVIVG01014050001 Vitis vinifera HOM05D006258 ORTHO05D007961 9.4e-23 111.3 72 70.8
Eucgr.C00243 Eucalyptus grandis HOM05D006258 ORTHO05D007961 6.1e-22 108.6 70 74.3
Phvul.004G145400 Phaseolus vulgaris HOM05D006258 ORTHO05D007961 1.4e-21 107.5 206 45.6
Sc08g0004870 Simmondsia chinensis HOM05D006258 ORTHO05D007961 1.4e-21 107.5 84 57.1
Sc08g0004890 Simmondsia chinensis HOM05D006258 ORTHO05D007961 1.8e-21 107.1 84 57.1
SalBow1G4688 Salvia bowleyana HOM05D006258 ORTHO05D007961 3.0e-21 106.3 84 59.5
COL.COLO4_05707 Corchorus olitorius HOM05D006258 ORTHO05D007961 3.9e-21 105.9 71 70.4
Lj6g0013743 Lotus japonicus HOM05D006258 ORTHO05D007961 8.8e-21 104.8 83 57.8
BcaNung03436 Brassica carinata HOM05D006258 ORTHO05D007961 2.0e-20 103.6 79 59.5
Psat2g031800 Pisum sativum HOM05D006258 ORTHO05D007961 5.7e-20 102.1 198 53.0
Nitab4.5_0003759g0010 Nicotiana tabacum HOM05D006258 ORTHO05D007961 1.3e-19 100.9 96 51.0
Nitab4.5_0006335g0030 Nicotiana tabacum HOM05D006258 ORTHO05D007961 2.8e-19 99.8 203 65.5
Sp7g28700 Schrenkiella parvula HOM05D006258 ORTHO05D007961 3.7e-19 99.4 190 67.9
CAN.G1610.1 Capsicum annuum HOM05D006258 ORTHO05D007961 6.3e-19 98.6 217 60.4
Nitab4.5_0006810g0010 Nicotiana tabacum HOM05D006258 ORTHO05D007961 1.8e-18 97.1 96 49.0
Peaxi162Scf01313g10029 Petunia axillaris HOM05D006258 ORTHO05D007961 2.4e-18 96.7 217 60.4
AL7G21300 Arabidopsis lyrata HOM05D006258 ORTHO05D007961 3.1e-18 96.3 190 66.3
Solyc07g005950.4 Solanum lycopersicum HOM05D006258 ORTHO05D007961 3.1e-18 96.3 217 61.3
THA.LOC104814742 Tarenaya hassleriana HOM05D006258 ORTHO05D007961 4.1e-18 95.9 75 57.3
TWI63G1632 Tripterygium wilfordii HOM05D006258 ORTHO05D007961 5.3e-18 95.5 62 69.4
THA.LOC109116244 Tarenaya hassleriana HOM05D006258 ORTHO05D007961 5.9e-17 92.0 71 62.0
PGSC0003DMG400011207 Solanum tuberosum HOM05D006258 ORTHO05D007961 1.3e-16 90.9 217 58.5
Sopen07g002080 Solanum pennellii HOM05D006258 ORTHO05D007961 3.8e-16 89.4 217 59.9
Os09g0423300 Oryza sativa ssp. japonica HOM05D006258 ORTHO05D007961 6.7e-13 78.6 75 50.7
HPP92_018549 Vanilla planifolia HOM05D006258 ORTHO05D007961 7.5e-12 75.1 60 55.0
Zm00001eb414570 Zea mays HOM05D006258 ORTHO05D007961 3.1e-10 69.7 81 44.4
AUR62039732 Chenopodium quinoa HOM05D006258 ORTHO05D007961 5.5e-07 58.9 48 56.2
SEGI_25615 Sequoiadendron giganteum HOM05D006258 ORTHO05D007961 2.1e-06 57.0 60 43.3


User provided reference genes

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