Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 6.7e-110 400.6 189 100.0
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.9e-80 302.8 191 75.4
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.9e-80 302.8 186 75.8
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 2.5e-80 302.4 190 73.7
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 5.5e-80 301.2 189 74.6
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 7.2e-80 300.8 191 75.4
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 7.2e-80 300.8 186 74.7
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.2e-79 300.1 190 76.8
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 6.1e-79 297.7 190 73.7
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 6.1e-79 297.7 191 73.3
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 8.0e-79 297.4 190 73.2
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 8.0e-79 297.4 189 76.2
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 1.0e-78 297.0 190 76.3
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 1.8e-78 296.2 190 73.2
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 4.0e-78 295.0 190 73.7
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 8.9e-78 293.9 185 74.1
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 1.2e-77 293.5 191 71.2
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 1.2e-77 293.5 190 73.7
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.0e-77 292.7 190 74.2
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 3.4e-77 292.0 190 74.7
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 4.4e-77 291.6 187 73.3
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 7.5e-77 290.8 192 71.4
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 9.8e-77 290.4 192 71.4
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 9.8e-77 290.4 191 72.8
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.3e-76 290.0 191 70.7
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 1.3e-76 290.0 187 71.1
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.7e-76 289.7 190 72.6
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.7e-76 289.7 190 73.7
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 1.7e-76 289.7 190 73.7
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 2.2e-76 289.3 186 71.5
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 1.1e-75 287.0 191 72.8
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 1.4e-75 286.6 190 71.1
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 1.4e-75 286.6 190 69.5
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 2.4e-75 285.8 188 71.8
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 2.4e-75 285.8 187 72.2
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 7.0e-75 284.3 190 69.5
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 1.2e-74 283.5 189 72.5
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 1.2e-74 283.5 190 70.0
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.2e-74 283.5 186 69.9
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.6e-74 283.1 188 70.2
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 2.0e-74 282.7 190 69.5
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 3.5e-74 282.0 187 70.6
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 4.5e-74 281.6 189 70.9
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.5e-74 281.6 185 70.8
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.5e-74 281.6 185 70.8
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 4.5e-74 281.6 186 70.4
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 7.8e-74 280.8 189 70.9
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 7.8e-74 280.8 188 70.7
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.3e-73 280.0 188 70.7
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 1.7e-73 279.6 188 69.7
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 1.7e-73 279.6 191 70.7
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 2.3e-73 279.3 187 70.1
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 2.3e-73 279.3 187 71.1
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 3.8e-73 278.5 190 69.5
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 3.8e-73 278.5 185 70.3
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.8e-73 278.5 185 70.3
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 3.8e-73 278.5 188 69.1
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 3.8e-73 278.5 189 70.4
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 3.8e-73 278.5 191 70.2
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 5.0e-73 278.1 190 65.3
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 6.6e-73 277.7 184 70.1
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 8.6e-73 277.3 190 68.4
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 8.6e-73 277.3 190 69.5
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 8.6e-73 277.3 190 68.4
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 2.5e-72 275.8 190 67.9
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 3.3e-72 275.4 184 70.7
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.3e-72 275.0 185 70.3
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 5.6e-72 274.6 206 65.0
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 7.3e-72 274.2 189 69.8
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 7.3e-72 274.2 187 67.4
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 9.5e-72 273.9 191 68.1
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 1.2e-71 273.5 191 67.0
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.6e-71 273.1 189 68.8
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 2.1e-71 272.7 190 68.4
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 2.1e-71 272.7 188 68.6
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.8e-71 272.3 189 68.8
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 2.8e-71 272.3 188 69.1
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 2.8e-71 272.3 188 68.6
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.6e-71 271.9 188 67.0
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 4.7e-71 271.6 190 65.8
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 8.0e-71 270.8 186 65.6
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 8.0e-71 270.8 182 69.8
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 1.4e-70 270.0 183 67.2
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 3.1e-70 268.9 190 65.8
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 3.1e-70 268.9 190 65.8
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 4.0e-70 268.5 190 65.8
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 4.0e-70 268.5 218 62.4
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 5.2e-70 268.1 192 68.8
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 5.2e-70 268.1 189 66.7
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 8.9e-70 267.3 190 65.3
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 8.9e-70 267.3 190 65.3
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.6e-69 265.8 183 64.5
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 4.4e-69 265.0 184 67.9
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 7.5e-69 264.2 229 57.6
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.1e-67 258.5 190 67.4
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 5.4e-67 258.1 188 65.4
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 7.0e-67 257.7 190 66.8
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 7.0e-67 257.7 190 64.7
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 4.6e-66 255.0 189 64.6
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.7e-65 253.1 178 69.1
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 1.1e-64 250.4 190 63.2
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.1e-64 250.4 149 77.9
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.9e-64 249.6 188 62.2
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 4.3e-64 248.4 184 64.1
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.6e-63 246.5 190 61.1
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.1e-63 246.1 190 61.1
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 2.1e-63 246.1 186 62.4
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 1.8e-62 243.0 188 60.1
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.2e-61 240.4 190 63.2
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 2.4e-59 232.6 185 57.3
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 3.2e-59 232.3 184 57.6
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 7.0e-59 231.1 186 58.6
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 9.2e-59 230.7 189 59.3
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 3.5e-58 228.8 187 58.3
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 3.5e-58 228.8 189 59.3
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 4.6e-58 228.4 187 58.3
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 1.3e-57 226.9 185 57.8
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 2.5e-56 222.6 147 68.7
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.2e-53 213.8 136 72.1
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.4e-30 137.1 109 58.7
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.1e-30 136.0 84 72.6
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 4.0e-30 135.6 112 60.7
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.5e-29 133.7 101 67.3
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 7.6e-29 131.3 82 74.4
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 9.9e-29 131.0 119 52.9
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.2e-18 97.4 94 51.1
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 2.7e-10 69.7 77 48.1
PRCOL_00002298 Prasinoderma coloniale HOM05D006185 ORTHO05D007572 2.8e-07 59.7 194 26.8


User provided reference genes

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