Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1027 Trochodendron aralioides HOM05D005375 ORTHO05D006598 7.2e-107 390.6 195 100.0
TAR629G0374 Trochodendron aralioides HOM05D005375 ORTHO05D006598 2.1e-82 309.3 194 82.0
GSVIVG01037729001 Vitis vinifera HOM05D005375 ORTHO05D006598 8.8e-81 303.9 192 78.6
Dinv40796 Davidia involucrata HOM05D005375 ORTHO05D006598 1.3e-79 300.1 192 79.7
TAR627G0180 Trochodendron aralioides HOM05D005375 ORTHO05D006598 4.8e-79 298.1 194 78.4
Cfa020276 Carpinus fangiana HOM05D005375 ORTHO05D006598 8.3e-79 297.4 192 78.1
Thecc.07G027900 Theobroma cacao HOM05D005375 ORTHO05D006598 1.4e-78 296.6 196 77.0
Dinv22229 Davidia involucrata HOM05D005375 ORTHO05D006598 1.8e-78 296.2 192 78.1
Prupe.8G266900 Prunus persica HOM05D005375 ORTHO05D006598 3.1e-78 295.4 198 76.3
RcHm_v2.0_Chr7g0241441 Rosa chinensis HOM05D005375 ORTHO05D006598 5.4e-78 294.7 192 77.6
Potri.011G082000 Populus trichocarpa HOM05D005375 ORTHO05D006598 2.0e-77 292.7 182 81.3
Nitab4.5_0007749g0010 Nicotiana tabacum HOM05D005375 ORTHO05D006598 2.7e-77 292.4 192 76.6
Duzib268G0742 Durio zibethinus HOM05D005375 ORTHO05D006598 3.5e-77 292.0 187 78.1
PSO302G0025 Papaver somniferum HOM05D005375 ORTHO05D006598 4.5e-77 291.6 189 76.2
CSS0031566 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 5.9e-77 291.2 191 76.4
Sabra11G0065600 Salix brachista HOM05D005375 ORTHO05D006598 5.9e-77 291.2 196 76.5
Atru.chr2.3553 Acer truncatum HOM05D005375 ORTHO05D006598 7.7e-77 290.8 192 77.6
FAN18G4382 Fragaria x ananassa HOM05D005375 ORTHO05D006598 1.0e-76 290.4 192 76.6
MD03G1294800 Malus domestica HOM05D005375 ORTHO05D006598 1.0e-76 290.4 198 74.7
Atru.chr2.3534 Acer truncatum HOM05D005375 ORTHO05D006598 1.3e-76 290.0 192 77.6
FvH4_5g39180 Fragaria vesca HOM05D005375 ORTHO05D006598 1.3e-76 290.0 192 76.6
FAN08G1518 Fragaria x ananassa HOM05D005375 ORTHO05D006598 2.3e-76 289.3 192 76.6
Nitab4.5_0001160g0010 Nicotiana tabacum HOM05D005375 ORTHO05D006598 2.3e-76 289.3 192 76.0
PSO210G0227 Papaver somniferum HOM05D005375 ORTHO05D006598 2.3e-76 289.3 189 75.1
Ciclev10008309m.g Citrus clementina HOM05D005375 ORTHO05D006598 2.9e-76 288.9 192 77.1
SGA_v2.0_scaffold8G04388 Striga asiatica HOM05D005375 ORTHO05D006598 2.9e-76 288.9 183 78.7
CAN.G337.55 Capsicum annuum HOM05D005375 ORTHO05D006598 3.8e-76 288.5 192 77.1
AUR62015884 Chenopodium quinoa HOM05D005375 ORTHO05D006598 5.0e-76 288.1 191 75.4
Duzib170G0122 Durio zibethinus HOM05D005375 ORTHO05D006598 5.0e-76 288.1 181 80.1
Rhsim06G0223700 Rhododendron simsii HOM05D005375 ORTHO05D006598 5.0e-76 288.1 201 74.1
Hma1.2p1_1332F.1_g276150 Hydrangea macrophylla HOM05D005375 ORTHO05D006598 6.5e-76 287.7 184 78.3
MD00G1179000 Malus domestica HOM05D005375 ORTHO05D006598 6.5e-76 287.7 193 76.2
Aqoxy1G04123 Aquilegia oxysepala HOM05D005375 ORTHO05D006598 1.5e-75 286.6 194 75.8
AUR62020339 Chenopodium quinoa HOM05D005375 ORTHO05D006598 1.5e-75 286.6 191 74.3
FAN04G2161 Fragaria x ananassa HOM05D005375 ORTHO05D006598 1.5e-75 286.6 192 75.5
Cc05_g14340 Coffea canephora HOM05D005375 ORTHO05D006598 2.5e-75 285.8 184 76.6
CiPaw.11G194800 Carya illinoinensis HOM05D005375 ORTHO05D006598 3.2e-75 285.4 196 75.0
FAN13G1970 Fragaria x ananassa HOM05D005375 ORTHO05D006598 3.2e-75 285.4 192 76.6
QL08p007584 Quercus lobata HOM05D005375 ORTHO05D006598 3.2e-75 285.4 192 77.6
MSTRG.12999 Avicennia marina HOM05D005375 ORTHO05D006598 4.2e-75 285.0 190 75.3
CSS0047507 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 5.5e-75 284.6 191 75.9
Nitab4.5_0005078g0020 Nicotiana tabacum HOM05D005375 ORTHO05D006598 7.2e-75 284.3 192 74.0
Lj6g0028194 Lotus japonicus HOM05D005375 ORTHO05D006598 1.6e-74 283.1 192 74.5
Gorai.002G093900 Gossypium raimondii HOM05D005375 ORTHO05D006598 2.8e-74 282.3 196 74.5
Nitab4.5_0004445g0070 Nicotiana tabacum HOM05D005375 ORTHO05D006598 2.8e-74 282.3 192 73.4
Solyc07g064980.3 Solanum lycopersicum HOM05D005375 ORTHO05D006598 2.8e-74 282.3 192 75.0
PGSC0003DMG400022298 Solanum tuberosum HOM05D005375 ORTHO05D006598 2.8e-74 282.3 192 75.5
Gohir.D05G374900 Gossypium hirsutum HOM05D005375 ORTHO05D006598 3.6e-74 282.0 187 76.5
Gorai.009G443800 Gossypium raimondii HOM05D005375 ORTHO05D006598 3.6e-74 282.0 187 76.5
Gohir.A04G011700 Gossypium hirsutum HOM05D005375 ORTHO05D006598 6.1e-74 281.2 187 76.5
THA.LOC104811633 Tarenaya hassleriana HOM05D005375 ORTHO05D006598 6.1e-74 281.2 193 75.1
TWI38G0072 Tripterygium wilfordii HOM05D005375 ORTHO05D006598 6.1e-74 281.2 183 76.0
Manes.03G136300 Manihot esculenta HOM05D005375 ORTHO05D006598 8.0e-74 280.8 192 74.0
Medtr5g093880 Medicago truncatula HOM05D005375 ORTHO05D006598 8.0e-74 280.8 184 75.5
ATR1101G026 Amborella trichopoda HOM05D005375 ORTHO05D006598 1.0e-73 280.4 181 79.6
Peaxi162Scf00235g00721 Petunia axillaris HOM05D005375 ORTHO05D006598 1.0e-73 280.4 198 74.2
Phvul.008G272700 Phaseolus vulgaris HOM05D005375 ORTHO05D006598 1.4e-73 280.0 190 75.3
Glyma.14G018200 Glycine max HOM05D005375 ORTHO05D006598 1.8e-73 279.6 192 73.4
Sp7g24730 Schrenkiella parvula HOM05D005375 ORTHO05D006598 1.8e-73 279.6 187 74.3
LjContig00272g0009776 Lotus japonicus HOM05D005375 ORTHO05D006598 2.3e-73 279.3 190 74.2
VMungo0647G1984 Vigna mungo HOM05D005375 ORTHO05D006598 2.3e-73 279.3 192 73.4
Lalb_Chr04g0248131 Lupinus albus HOM05D005375 ORTHO05D006598 3.0e-73 278.9 192 74.5
Sopen07g033190 Solanum pennellii HOM05D005375 ORTHO05D006598 3.0e-73 278.9 192 74.5
CSS0021148 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 4.0e-73 278.5 177 78.0
Actinidia05060 Actinidia chinensis HOM05D005375 ORTHO05D006598 5.2e-73 278.1 196 73.5
Gohir.A01G084800 Gossypium hirsutum HOM05D005375 ORTHO05D006598 5.2e-73 278.1 181 77.3
Gohir.D01G071200 Gossypium hirsutum HOM05D005375 ORTHO05D006598 6.8e-73 277.7 196 74.0
C01p22820 Brassica napus HOM05D000504 ORTHO05D006598 1.2e-72 276.9 194 72.2
Glyma.02G295200 Glycine max HOM05D005375 ORTHO05D006598 1.2e-72 276.9 192 72.9
EL10Ac4g07689 Beta vulgaris HOM05D005375 ORTHO05D006598 1.5e-72 276.6 193 71.5
Eucgr.F03508 Eucalyptus grandis HOM05D005375 ORTHO05D006598 1.5e-72 276.6 191 74.3
Thhalv10025139m.g Eutrema salsugineum HOM05D005375 ORTHO05D006598 1.5e-72 276.6 187 73.8
Migut.M01705 Erythranthe guttata HOM05D005375 ORTHO05D006598 2.0e-72 276.2 191 72.3
MSTRG.6961 Avicennia marina HOM05D005375 ORTHO05D006598 2.6e-72 275.8 189 75.1
A01p18000 Brassica napus HOM05D000504 ORTHO05D000403 3.4e-72 275.4 194 72.2
BraA01t01755Z Brassica rapa HOM05D000504 ORTHO05D000403 3.4e-72 275.4 194 72.2
CARHR234370 Cardamine hirsuta HOM05D005375 ORTHO05D006598 4.4e-72 275.0 188 73.4
CDE07G0643 Ceratophyllum demersum HOM05D005375 ORTHO05D006598 4.4e-72 275.0 176 79.0
BolC1t02212H Brassica oleracea HOM05D005375 ORTHO05D006598 5.7e-72 274.6 194 71.6
Cpa.g.sc284.2 Carica papaya HOM05D005375 ORTHO05D006598 7.5e-72 274.2 174 79.3
CsaV3_3G004730 Cucumis sativus L. HOM05D005375 ORTHO05D006598 1.3e-71 273.5 181 75.7
HanXRQChr13g0408271 Helianthus annuus HOM05D005375 ORTHO05D006598 1.3e-71 273.5 184 74.5
Psat2g009920 Pisum sativum HOM05D005375 ORTHO05D006598 1.3e-71 273.5 183 74.3
MELO3C014172.2 Cucumis melo HOM05D005375 ORTHO05D006598 2.2e-71 272.7 181 75.7
TPR.G35360 Trifolium pratense HOM05D005375 ORTHO05D006598 2.2e-71 272.7 182 74.2
ECA240G0086 Erigeron canadensis HOM05D005375 ORTHO05D006598 2.8e-71 272.3 192 72.4
Lsat_1_v5_gn_9_90720 Lactuca sativa HOM05D005375 ORTHO05D006598 2.8e-71 272.3 194 71.1
Os06g0308800 Oryza sativa ssp. japonica HOM05D005375 ORTHO05D006598 2.8e-71 272.3 192 72.9
AL7G26080 Arabidopsis lyrata HOM05D005375 ORTHO05D006598 3.7e-71 271.9 187 71.7
CDE04G3304 Ceratophyllum demersum HOM05D005375 ORTHO05D006598 3.7e-71 271.9 177 76.8
Migut.H01791 Erythranthe guttata HOM05D005375 ORTHO05D006598 4.9e-71 271.6 163 81.6
CANSAT11G2127 Cannabis sativa HOM05D005375 ORTHO05D006598 8.3e-71 270.8 184 74.5
Carub.0007s1409 Capsella rubella HOM05D005375 ORTHO05D006598 1.8e-70 269.6 187 72.2
AT4G26750 Arabidopsis thaliana HOM05D005375 ORTHO05D006598 2.4e-70 269.2 187 71.7
HanXRQChr03g0076881 Helianthus annuus HOM05D005375 ORTHO05D006598 4.1e-70 268.5 196 70.4
Lalb_Chr00c48g0412951 Lupinus albus HOM05D005375 ORTHO05D006598 7.0e-70 267.7 175 77.1
Aa31LG5G12180 Aethionema arabicum HOM05D005375 ORTHO05D006598 9.2e-70 267.3 187 70.6
HPP92_015778 Vanilla planifolia HOM05D005375 ORTHO05D006598 1.2e-69 266.9 164 81.1
vmacro22307 Vaccinium macrocarpon HOM05D005375 ORTHO05D006598 1.6e-69 266.5 245 60.4
SEGI_32868 Sequoiadendron giganteum HOM05D005375 ORTHO05D006598 7.8e-69 264.2 190 71.1
Ca_06349_v3 Cicer arietinum L. HOM05D005375 ORTHO05D006598 1.3e-68 263.5 175 74.9
ClCG10G005050 Citrullus lanatus HOM05D005375 ORTHO05D006598 1.9e-67 259.6 209 66.0
unitig_747.g21591 Utricularia gibba HOM05D005375 ORTHO05D006598 6.1e-66 254.6 172 73.8
Nn1g07350 Nelumbo nucifera HOM05D005375 ORTHO05D006598 2.0e-64 249.6 191 71.2
SMO271G0101 Selaginella moellendorffii HOM05D005375 ORTHO05D006598 2.6e-64 249.2 184 68.5
Lj8A173T72 Lonicera japonica HOM05D005375 ORTHO05D006598 1.4e-62 243.4 186 68.3
Mapoly0043s0080 Marchantia polymorpha HOM05D005375 ORTHO05D006598 1.8e-62 243.0 159 73.6
COL.COLO4_09738 Corchorus olitorius HOM05D005375 ORTHO05D006598 3.3e-59 232.3 145 80.7
Pp3c12_1420 Physcomitrium patens HOM05D005375 ORTHO05D006598 5.6e-59 231.5 155 72.3
DCAR_022591 Daucus carota HOM05D005375 ORTHO05D006598 1.1e-57 227.3 187 65.2
Zm00001eb281230 Zea mays HOM05D005375 ORTHO05D006598 4.9e-55 218.4 156 73.1
TWI39G0687 Tripterygium wilfordii HOM05D005375 ORTHO05D006598 6.4e-55 218.0 128 82.0
Lj1C881T5 Lonicera japonica HOM05D005375 ORTHO05D006598 1.1e-54 217.2 163 69.3
Sed0014032 Sechium edule HOM05D005375 ORTHO05D006598 2.0e-53 213.0 145 74.5
PGR031G3708 Punica granatum HOM05D005375 ORTHO05D006598 1.7e-52 209.9 155 71.6
CSS0025851 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 3.9e-52 208.8 137 77.4
Oeu054311.1 Olea europaea HOM05D005375 ORTHO05D006598 2.4e-46 189.5 188 55.9
Lalb_Chr00c48g0413001 Lupinus albus HOM05D005375 ORTHO05D006598 5.6e-43 178.3 166 59.6
Actinidia32285 Actinidia chinensis HOM05D005375 ORTHO05D006598 9.5e-43 177.6 193 53.9
BcaC09g52262 Brassica carinata HOM05D005375 ORTHO05D006598 6.2e-42 174.9 129 70.5
PGR031G2801 Punica granatum HOM05D005375 ORTHO05D006598 1.4e-41 173.7 139 68.3
Haze_09747 Corylus avellana HOM05D005375 ORTHO05D006598 3.4e-40 169.1 124 70.2
DCAR_016648 Daucus carota HOM05D005375 ORTHO05D006598 3.9e-36 155.6 115 69.6
AagrBONN_evm.TU.Sc2ySwM_368.1760 Anthoceros agrestis HOM05D005375 ORTHO05D006598 1.1e-35 154.1 109 68.8
Cre03.g145227 Chlamydomonas reinhardtii HOM05D005375 ORTHO05D006598 1.1e-35 154.1 154 50.0
PRCOL_00004002 Prasinoderma coloniale HOM05D005375 ORTHO05D006598 1.9e-35 153.3 189 45.5
CBR_g50394 Chara braunii HOM05D005375 ORTHO05D006598 2.8e-34 149.4 115 65.2
MCO03G124 Micromonas commoda HOM05D005375 ORTHO05D006598 5.4e-30 135.2 147 46.3
SHI26566 Sapria himalayana HOM05D005375 ORTHO05D006598 6.0e-29 131.7 220 40.9
Sc16g0005720 Simmondsia chinensis HOM05D005375 ORTHO05D006598 6.2e-26 121.7 90 67.8
Actinidia37374 Actinidia chinensis HOM05D005375 ORTHO05D006598 1.4e-22 110.5 83 68.7
Ah.06g182230 Amaranthus hybridus HOM05D005375 ORTHO05D006598 3.5e-21 105.9 65 76.9
Hund23196 Selenicereus undatus HOM05D005375 ORTHO05D006598 1.0e-20 104.4 97 59.8
Nn1g03334 Nelumbo nucifera HOM05D005375 ORTHO05D006598 8.7e-20 101.3 162 42.6
MCO09G798 Micromonas commoda HOM05D005375 ORTHO05D006598 9.3e-14 81.3 155 34.2
C08p09960 Brassica napus HOM05D000504 ORTHO05D000403 2.7e-13 79.7 62 62.9
BolC8t48673H Brassica oleracea HOM05D000504 ORTHO05D000403 2.7e-13 79.7 62 62.9
CAN.G396.4 Capsicum annuum HOM05D005375 ORTHO05D006598 1.9e-11 73.6 104 44.2
CAN.G4023.1 Capsicum annuum HOM05D005375 ORTHO05D006598 1.9e-11 73.6 104 44.2
CAN.G396.14 Capsicum annuum HOM05D005375 ORTHO05D006598 5.3e-09 65.5 51 64.7
Cfa022458 Carpinus fangiana HOM05D005375 ORTHO05D121393 9.3e-06 54.7 74 39.2


User provided reference genes

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