Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.9e-158 562.4 274 100.0
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 3.6e-120 435.3 272 78.3
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 8.2e-117 424.1 273 76.2
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 7.0e-116 421.0 274 74.8
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 1.2e-115 420.2 261 79.3
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 8.5e-114 414.1 279 74.6
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 1.1e-113 413.7 258 79.1
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 1.6e-112 409.8 267 75.7
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 2.7e-112 409.1 265 75.8
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 8.0e-112 407.5 275 72.4
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 2.3e-111 406.0 276 72.5
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 8.8e-111 404.1 273 72.5
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 1.5e-110 403.3 272 73.2
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 5.7e-110 401.4 273 73.3
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 5.7e-110 401.4 275 71.6
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 7.5e-110 401.0 274 73.0
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 7.5e-110 401.0 272 72.8
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 7.5e-110 401.0 268 74.3
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 9.7e-110 400.6 270 73.7
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.3e-109 400.2 276 71.7
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 1.7e-109 399.8 273 72.9
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 2.8e-109 399.1 274 72.6
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 6.3e-109 397.9 261 73.9
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 1.1e-108 397.1 273 74.0
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 5.3e-108 394.8 253 77.9
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 7.0e-108 394.4 269 72.5
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 1.2e-107 393.7 279 71.3
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 1.6e-107 393.3 261 75.1
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 1.6e-107 393.3 261 73.2
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 1.6e-107 393.3 272 72.1
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 2.0e-107 392.9 270 72.6
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 2.7e-107 392.5 270 72.2
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 3.5e-107 392.1 273 72.5
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 3.5e-107 392.1 258 76.0
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 4.5e-107 391.7 274 73.4
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 4.5e-107 391.7 272 70.6
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 5.9e-107 391.3 273 70.7
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 5.9e-107 391.3 270 71.9
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 5.9e-107 391.3 270 73.0
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 5.9e-107 391.3 269 73.2
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 5.9e-107 391.3 269 73.2
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 1.0e-106 390.6 269 73.2
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.7e-106 389.8 271 72.3
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 2.2e-106 389.4 260 75.0
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 2.9e-106 389.0 271 72.7
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 3.8e-106 388.7 271 70.8
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 6.5e-106 387.9 271 71.2
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 8.5e-106 387.5 285 69.5
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 8.5e-106 387.5 261 74.3
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 1.5e-105 386.7 274 71.5
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 2.5e-105 386.0 269 73.2
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 3.2e-105 385.6 277 69.7
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 4.2e-105 385.2 271 70.5
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 2.7e-104 382.5 304 66.1
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 3.6e-104 382.1 267 70.8
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 8.0e-104 380.9 279 70.3
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 1.0e-103 380.6 272 69.1
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 5.2e-103 378.3 263 71.9
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 1.2e-102 377.1 275 69.8
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 2.6e-102 375.9 269 69.9
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 2.6e-102 375.9 267 71.2
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 2.6e-102 375.9 271 67.9
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 4.4e-102 375.2 271 69.7
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 7.5e-102 374.4 274 69.0
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 1.3e-101 373.6 271 67.9
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 2.2e-101 372.9 262 70.6
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 4.8e-101 371.7 271 68.6
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 4.8e-101 371.7 257 71.2
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 6.3e-101 371.3 260 71.5
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 3.5e-99 365.5 264 68.6
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 4.5e-99 365.2 209 82.3
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 2.9e-98 362.5 244 73.0
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 2.5e-97 359.4 257 69.6
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 3.2e-97 359.0 269 67.3
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 4.2e-97 358.6 267 68.2
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 4.2e-97 358.6 285 65.3
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 7.2e-97 357.8 212 80.2
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 2.1e-96 356.3 317 59.0
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 2.8e-96 355.9 270 66.7
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 3.6e-96 355.5 270 68.1
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 4.7e-96 355.1 269 66.5
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 4.7e-96 355.1 263 67.7
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 6.1e-96 354.8 267 67.0
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 8.0e-96 354.4 271 67.5
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 8.0e-96 354.4 271 67.5
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 8.0e-96 354.4 275 66.9
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 1.0e-95 354.0 262 68.3
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 1.4e-95 353.6 271 68.3
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 1.8e-95 353.2 271 67.2
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 4.0e-95 352.1 271 67.2
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 5.2e-95 351.7 268 66.8
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 4.4e-94 348.6 272 65.8
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 4.4e-94 348.6 272 65.8
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 5.7e-94 348.2 272 65.8
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 5.7e-94 348.2 272 65.8
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 2.2e-93 346.3 274 65.7
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 3.7e-93 345.5 304 59.5
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 6.3e-93 344.7 260 63.8
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 4.5e-91 338.6 278 63.3
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 2.9e-90 335.9 222 71.6
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 1.5e-89 333.6 280 61.1
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 1.6e-88 330.1 260 63.8
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 4.7e-88 328.6 272 60.7
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 6.8e-87 324.7 209 72.7
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 1.3e-85 320.5 278 59.0
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 3.0e-82 309.3 263 62.7
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 3.3e-81 305.8 228 69.3
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 7.3e-81 304.7 259 60.6
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 6.4e-77 291.6 259 59.1
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 1.6e-75 287.0 184 75.5
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 8.6e-74 281.2 199 69.3
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 3.6e-72 275.8 229 60.7
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 2.3e-71 273.1 195 68.2
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 3.1e-71 272.7 256 56.2
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 5.8e-70 268.5 196 67.3
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 4.1e-68 262.3 187 67.4
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 1.5e-65 253.8 183 68.9
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 4.7e-64 248.8 187 63.6
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 1.3e-61 240.7 267 46.8
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 4.9e-61 238.8 197 54.8
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 6.0e-59 231.9 198 56.6
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.1e-49 201.1 272 45.2
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 4.8e-48 195.7 170 54.7
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 3.8e-45 186.0 221 49.8
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 9.3e-44 181.4 210 43.3
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 1.8e-39 167.2 277 35.7
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 9.3e-36 154.8 84 86.9
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 3.9e-26 122.9 170 37.6
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 5.7e-25 119.0 83 74.7
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 4.8e-24 115.9 274 31.8
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 1.5e-22 110.9 57 91.2
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 2.2e-21 107.1 54 92.6
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 1.1e-17 94.7 52 82.7
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 1.1e-07 61.6 192 27.6
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 3.4e-06 56.6 194 25.3
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 4.5e-06 56.2 177 28.8
Prupe.6G060500 Prunus persica HOM05D005325 ORTHO05D008457 4.5e-06 56.2 191 28.3
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 5.9e-06 55.8 180 27.2
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 5.9e-06 55.8 180 27.2
FAN25G2817 Fragaria x ananassa HOM05D005325 ORTHO05D008457 5.9e-06 55.8 188 28.2
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 7.7e-06 55.5 179 29.1
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 7.7e-06 55.5 187 26.2


User provided reference genes

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