Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.5e-52 209.1 102 100.0
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.5e-52 209.1 102 100.0
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.5e-42 176.0 102 85.3
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.9e-42 175.6 103 85.4
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.1e-37 156.8 101 76.2
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 1.8e-29 132.5 104 65.4
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 6.5e-27 124.0 103 62.1
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 3.3e-26 121.7 100 63.0
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 3.3e-26 121.7 102 61.8
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 3.3e-26 121.7 105 59.0
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 4.2e-26 121.3 99 60.6
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 4.2e-26 121.3 105 63.8
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 4.2e-26 121.3 105 59.0
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 1.2e-25 119.8 106 56.6
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.6e-25 119.4 104 59.6
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 2.1e-25 119.0 109 57.8
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 2.1e-25 119.0 106 57.5
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 2.1e-25 119.0 108 56.5
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 2.8e-25 118.6 109 58.7
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 2.8e-25 118.6 103 59.2
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 2.8e-25 118.6 108 56.5
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.8e-25 118.6 86 70.9
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 3.6e-25 118.2 99 56.6
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 6.1e-25 117.5 108 56.5
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 8.0e-25 117.1 106 54.7
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.4e-24 116.3 105 54.3
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 1.4e-24 116.3 101 56.4
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 1.8e-24 115.9 106 56.6
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 1.8e-24 115.9 101 60.4
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 2.3e-24 115.5 102 56.9
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 2.3e-24 115.5 104 56.7
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 5.2e-24 114.4 101 57.4
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 5.2e-24 114.4 100 57.0
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 1.2e-23 113.2 103 56.3
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.5e-23 112.8 102 57.8
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 1.5e-23 112.8 99 56.6
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 1.5e-23 112.8 107 57.9
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 1.5e-23 112.8 110 52.7
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 2.0e-23 112.5 107 57.0
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 2.0e-23 112.5 99 55.6
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 2.6e-23 112.1 102 54.9
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 2.6e-23 112.1 102 54.9
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 2.6e-23 112.1 100 54.0
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 3.4e-23 111.7 100 58.0
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 3.4e-23 111.7 100 57.0
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 4.4e-23 111.3 101 55.4
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 4.4e-23 111.3 114 50.9
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 5.7e-23 110.9 100 55.0
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 7.5e-23 110.5 107 54.2
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 9.8e-23 110.2 111 52.3
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 2.2e-22 109.0 110 51.8
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 2.2e-22 109.0 99 58.6
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 2.2e-22 109.0 102 54.9
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.8e-22 108.6 102 52.9
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 2.8e-22 108.6 99 56.6
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 3.7e-22 108.2 103 57.3
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 3.7e-22 108.2 103 57.3
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 4.9e-22 107.8 101 53.5
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 4.9e-22 107.8 100 53.0
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 4.9e-22 107.8 103 50.5
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 4.9e-22 107.8 109 53.2
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 4.9e-22 107.8 113 52.2
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 6.3e-22 107.5 103 52.4
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 8.3e-22 107.1 102 52.9
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 8.3e-22 107.1 102 52.0
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 8.3e-22 107.1 102 52.0
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 1.1e-21 106.7 102 54.9
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.1e-21 106.7 109 52.3
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 1.4e-21 106.3 112 50.9
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 1.8e-21 105.9 99 53.5
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 1.8e-21 105.9 103 53.4
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 2.4e-21 105.5 103 53.4
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 2.4e-21 105.5 101 51.5
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 3.1e-21 105.1 104 52.9
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 4.1e-21 104.8 103 56.3
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 7.0e-21 104.0 101 52.5
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 9.2e-21 103.6 117 48.7
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.2e-20 103.2 102 51.0
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 1.2e-20 103.2 103 53.4
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 1.6e-20 102.8 112 50.0
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 2.0e-20 102.4 102 52.9
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.0e-20 102.4 92 55.4
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 2.7e-20 102.1 99 50.5
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 2.7e-20 102.1 112 51.8
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 2.7e-20 102.1 100 53.0
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.5e-20 101.7 98 51.0
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 4.5e-20 101.3 106 51.9
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 5.9e-20 100.9 103 53.4
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.9e-20 100.9 56 89.3
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 7.8e-20 100.5 109 52.3
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 2.9e-19 98.6 102 50.0
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.8e-19 98.2 102 49.0
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 3.8e-19 98.2 102 52.9
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 5.0e-19 97.8 92 55.4
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 6.6e-19 97.4 85 61.2
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.6e-17 92.8 102 47.1
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.6e-17 92.8 111 43.2
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 1.6e-17 92.8 108 46.3
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 4.7e-17 91.3 104 47.1
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 3.0e-16 88.6 102 46.1
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.3e-14 83.2 51 80.4
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 2.2e-14 82.4 99 46.5
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 2.2e-14 82.4 101 44.6
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 3.2e-13 78.6 83 51.8
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 7.3e-10 67.4 59 66.1
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 2.8e-09 65.5 48 68.8
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.7e-09 64.7 92 41.3
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 4.0e-08 61.6 54 55.6
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 1.2e-07 60.1 71 46.5
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 2.0e-07 59.3 42 69.0
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 2.0e-07 59.3 54 53.7
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 2.0e-07 59.3 54 53.7
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 3.4e-07 58.5 48 52.1
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 5.8e-07 57.8 98 37.8
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 7.5e-07 57.4 50 52.0
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.3e-06 56.6 59 54.2
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 2.9e-06 55.5 86 38.4
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 3.7e-06 55.1 42 66.7


User provided reference genes

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