Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 5.7e-68 260.8 129 100.0
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 5.7e-68 260.8 129 100.0
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 9.4e-47 190.3 120 75.8
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 3.3e-44 181.8 97 88.7
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 5.7e-44 181.0 108 82.4
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 7.5e-44 180.6 108 83.3
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 1.3e-43 179.9 97 88.7
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 2.2e-43 179.1 97 88.7
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 2.8e-43 178.7 97 86.6
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 2.8e-43 178.7 97 86.6
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 1.1e-42 176.8 97 88.7
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 2.4e-42 175.6 97 85.6
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 2.4e-42 175.6 111 78.4
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 2.4e-42 175.6 97 84.5
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 4.1e-42 174.9 97 84.5
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 4.1e-42 174.9 111 76.6
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 5.3e-42 174.5 97 83.5
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 7.0e-42 174.1 97 85.6
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 9.1e-42 173.7 97 85.6
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.2e-41 173.3 97 83.5
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 1.2e-41 173.3 97 83.5
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 1.2e-41 173.3 97 85.6
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 1.6e-41 172.9 97 84.5
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 2.7e-41 172.2 97 82.5
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 2.7e-41 172.2 97 82.5
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 2.7e-41 172.2 96 84.4
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 5.9e-41 171.0 108 77.8
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 5.9e-41 171.0 96 83.3
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 5.9e-41 171.0 96 81.2
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 5.9e-41 171.0 97 81.4
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 1.3e-40 169.9 97 81.4
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 1.3e-40 169.9 97 82.5
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 1.3e-40 169.9 97 83.5
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 1.3e-40 169.9 97 82.5
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 1.3e-40 169.9 97 81.4
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 1.3e-40 169.9 97 80.4
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 2.2e-40 169.1 97 80.4
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 2.2e-40 169.1 97 80.4
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 2.9e-40 168.7 97 83.5
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 3.8e-40 168.3 97 83.5
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 5.0e-40 167.9 97 80.4
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 5.0e-40 167.9 97 81.4
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 5.0e-40 167.9 97 83.5
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 5.0e-40 167.9 97 83.5
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 5.0e-40 167.9 97 83.5
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 6.5e-40 167.5 97 83.5
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 8.5e-40 167.2 97 79.4
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 8.5e-40 167.2 97 78.4
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 8.5e-40 167.2 97 82.5
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 8.5e-40 167.2 96 81.2
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 1.1e-39 166.8 97 76.3
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 1.1e-39 166.8 97 76.3
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 1.1e-39 166.8 97 81.4
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 1.5e-39 166.4 97 78.4
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 1.5e-39 166.4 97 81.4
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 1.9e-39 166.0 97 78.4
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.9e-39 166.0 97 82.5
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 1.9e-39 166.0 97 82.5
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 2.5e-39 165.6 97 80.4
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 2.5e-39 165.6 97 80.4
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 2.5e-39 165.6 97 76.3
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 3.2e-39 165.2 97 78.4
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 3.2e-39 165.2 97 77.3
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 5.5e-39 164.5 97 78.4
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 7.2e-39 164.1 97 76.3
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 7.2e-39 164.1 97 75.3
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 7.2e-39 164.1 97 75.3
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 9.4e-39 163.7 97 75.3
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 9.4e-39 163.7 97 79.4
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 9.4e-39 163.7 97 79.4
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 9.4e-39 163.7 97 81.4
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 1.2e-38 163.3 97 77.3
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.6e-38 162.9 96 76.0
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 2.7e-38 162.2 97 78.4
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 3.6e-38 161.8 97 77.3
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 3.6e-38 161.8 98 76.5
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 8.0e-38 160.6 97 80.4
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 8.0e-38 160.6 97 76.3
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 1.0e-37 160.2 97 77.3
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 1.4e-37 159.8 97 77.3
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 1.8e-37 159.5 97 75.3
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 1.8e-37 159.5 97 76.3
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 3.0e-37 158.7 97 76.3
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 5.2e-37 157.9 97 75.3
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 6.8e-37 157.5 97 74.2
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 1.2e-36 156.8 97 76.3
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 1.2e-36 156.8 97 75.3
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 1.2e-36 156.8 97 74.2
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 1.5e-36 156.4 97 76.3
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 2.6e-36 155.6 97 76.3
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 2.6e-36 155.6 97 75.3
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 3.4e-36 155.2 97 76.3
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 5.7e-36 154.5 97 71.1
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 3.7e-35 151.8 88 81.8
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 3.7e-35 151.8 97 69.1
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 1.8e-34 149.4 97 73.2
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 2.8e-30 135.6 114 61.4
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 2.8e-30 135.6 114 61.4
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 3.6e-30 135.2 114 61.4
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 8.8e-29 130.6 97 61.9
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 3.4e-20 102.1 91 48.4
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 3.2e-18 95.5 50 86.0
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 1.0e-16 90.5 49 79.6
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 5.0e-16 88.2 49 85.7
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.1e-15 87.0 50 76.0
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.8e-13 79.7 47 76.6
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 4.4e-12 75.1 108 38.9
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 1.3e-11 73.6 47 63.8
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 1.3e-11 73.6 47 76.6
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.9e-10 69.7 41 78.0
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.9e-10 69.7 41 78.0
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 2.3e-08 62.8 32 81.2
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 4.3e-07 58.5 33 81.8


User provided reference genes

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