Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0911 Trochodendron aralioides HOM05D003492 ORTHO05D005115 1.3e-191 672.9 338 100.0
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 3.2e-139 498.8 311 78.1
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 3.4e-136 488.8 327 73.4
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 9.5e-131 470.7 311 73.0
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 1.1e-126 457.2 311 72.7
Actinidia13945 Actinidia chinensis HOM05D003492 ORTHO05D005115 3.1e-126 455.7 311 72.0
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 1.5e-123 446.8 311 70.7
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 1.9e-123 446.4 323 69.0
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 1.9e-123 446.4 327 66.7
Hma1.2p1_0235F.1_g098570 Hydrangea macrophylla HOM05D003492 ORTHO05D005115 3.3e-123 445.7 338 66.6
CiPaw.01G300100 Carya illinoinensis HOM05D003492 ORTHO05D005115 3.6e-122 442.2 312 70.5
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 4.7e-122 441.8 329 67.5
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 6.8e-121 438.0 327 67.0
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 7.5e-120 434.5 309 69.3
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 3.7e-119 432.2 313 68.7
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 1.4e-118 430.3 327 65.7
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 1.8e-118 429.9 311 68.5
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 7.0e-118 427.9 311 68.2
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 1.6e-117 426.8 311 68.2
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 5.9e-117 424.9 311 66.6
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 7.8e-117 424.5 311 66.6
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 1.7e-116 423.3 311 66.6
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 3.3e-115 419.1 316 65.5
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 1.2e-114 417.2 311 65.6
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 4.7e-114 415.2 311 65.6
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 3.1e-113 412.5 364 60.4
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 5.2e-113 411.8 312 65.7
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 1.2e-112 410.6 327 64.8
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 2.0e-112 409.8 317 64.0
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 1.7e-111 406.8 375 57.1
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 1.4e-110 403.7 316 64.9
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 5.4e-110 401.7 339 59.6
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 2.7e-109 399.4 328 61.0
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 3.5e-109 399.1 311 64.3
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 3.5e-109 399.1 318 62.9
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 4.6e-109 398.7 316 64.6
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 1.7e-108 396.7 311 64.0
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 5.0e-108 395.2 311 61.4
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 6.6e-108 394.8 318 62.6
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 1.5e-107 393.7 377 55.7
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 2.5e-107 392.9 320 62.5
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 5.6e-107 391.7 312 62.8
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 7.3e-107 391.3 312 63.1
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 7.3e-107 391.3 311 61.1
CAN.G78.68 Capsicum annuum HOM05D003492 ORTHO05D005115 1.2e-106 390.6 310 62.3
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 1.2e-106 390.6 308 63.3
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.6e-106 390.2 318 62.3
FAN03G1608 Fragaria x ananassa HOM05D003492 ORTHO05D005115 4.7e-106 388.7 320 61.6
Peaxi162Scf00284g00912 Petunia axillaris HOM05D003492 ORTHO05D005115 1.4e-105 387.1 339 59.0
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 8.9e-105 384.4 311 62.1
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 2.0e-104 383.3 311 61.4
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 2.6e-104 382.9 311 61.4
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 9.8e-104 380.9 313 62.9
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 2.9e-103 379.4 312 63.8
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 3.7e-103 379.0 313 62.9
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 3.7e-103 379.0 312 61.5
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 2.4e-102 376.3 311 60.8
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 3.2e-102 375.9 311 61.1
Ca_30996_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 3.2e-102 375.9 311 61.1
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 9.2e-102 374.4 327 59.6
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 6.0e-101 371.7 311 60.8
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 3.0e-100 369.4 313 61.7
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 5.1e-100 368.6 324 59.9
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 6.6e-100 368.2 313 60.4
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 1.5e-99 367.1 327 59.9
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 9.5e-99 364.4 326 59.8
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 9.5e-99 364.4 326 59.5
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 9.5e-99 364.4 314 60.2
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 8.1e-98 361.3 328 59.1
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 1.1e-97 360.9 328 59.5
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 1.4e-97 360.5 306 60.8
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 4.4e-96 355.5 343 56.0
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 2.2e-95 353.2 336 56.2
Nitab4.5_0011089g0020 Nicotiana tabacum HOM05D003492 ORTHO05D005115 4.9e-95 352.1 310 58.7
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 4.1e-94 349.0 331 56.8
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 7.1e-94 348.2 328 57.9
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 6.0e-93 345.1 328 57.3
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 6.0e-93 345.1 328 57.3
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 2.3e-92 343.2 330 56.7
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 3.9e-92 342.4 328 56.4
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 1.2e-90 337.4 327 56.0
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 1.6e-90 337.0 313 56.9
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 2.0e-88 330.1 326 56.1
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 8.4e-87 324.7 309 53.7
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 5.1e-84 315.5 350 52.3
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 6.2e-82 308.5 334 52.7
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 3.1e-81 306.2 316 52.5
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 9.0e-81 304.7 350 50.9
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 8.7e-76 288.1 323 48.9
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 8.4e-71 271.6 231 56.3
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 4.6e-69 265.8 311 48.6
Hund29345 Selenicereus undatus HOM05D003492 ORTHO05D005115 3.7e-66 256.1 235 56.2
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 1.1e-59 234.6 226 58.0
Hund28567 Selenicereus undatus HOM05D003492 ORTHO05D005115 3.7e-58 229.6 214 55.6
Zm00001eb286110 Zea mays HOM05D003492 ORTHO05D005115 1.9e-54 217.2 209 54.5
HPP92_012036 Vanilla planifolia HOM05D003492 ORTHO05D005115 3.6e-53 213.0 232 50.9
Mapoly0044s0071 Marchantia polymorpha HOM05D003492 ORTHO05D005115 1.8e-44 184.1 329 36.5
Duzib114G0096 Durio zibethinus HOM05D003492 ORTHO05D005115 2.0e-43 180.6 126 70.6
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 6.3e-42 175.6 327 37.9
CDE12G0028 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 3.2e-38 163.3 313 34.8
SEGI_03313 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 9.7e-35 151.8 218 41.3
Psat2g065680 Pisum sativum HOM05D003492 ORTHO05D005115 1.3e-34 151.4 122 59.8
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 2.2e-34 150.6 327 33.3
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis HOM05D003492 ORTHO05D005115 9.1e-33 145.2 326 30.1
SMO331G0080 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 7.7e-32 142.1 269 34.9
Lj8A65T41 Lonicera japonica HOM05D003492 ORTHO05D005115 9.7e-27 125.2 78 74.4
MBI15_g19421_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 1.7e-26 124.4 88 71.6
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 2.2e-26 124.0 78 75.6
SHI03336 Sapria himalayana HOM05D003492 ORTHO05D005115 1.1e-25 121.7 131 49.6
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 1.4e-25 121.3 130 50.8
Actinidia00955 Actinidia chinensis HOM05D003492 ORTHO05D019467 8.5e-23 112.1 91 64.8
Lj8A65T40 Lonicera japonica HOM05D003492 ORTHO05D005115 1.1e-22 111.7 74 71.6
DCAR_011824 Daucus carota HOM05D003492 ORTHO05D005115 2.1e-21 107.5 77 68.8
CBR_g22845 Chara braunii HOM05D003492 ORTHO05D005115 2.8e-18 97.1 292 27.7
CAN.G3101.1 Capsicum annuum HOM05D003492 ORTHO05D005115 4.9e-10 69.7 71 52.1
SHI03338 Sapria himalayana HOM05D003492 ORTHO05D005115 7.8e-08 62.4 89 42.7
TAR627G0335 Trochodendron aralioides HOM05D003492 ORTHO05D415945 4.3e-06 56.6 31 80.6
HPP92_012027 Vanilla planifolia HOM05D003492 ORTHO05D005115 4.3e-06 56.6 81 48.1


User provided reference genes

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