Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 2.5e-308 1061.2 510 100.0
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 3.8e-200 701.8 512 69.3
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 2.2e-195 686.0 509 66.4
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 1.1e-188 663.7 496 65.5
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 1.8e-186 656.4 498 64.5
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 2.4e-186 656.0 497 65.6
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 5.2e-181 638.3 500 63.0
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 4.5e-177 625.2 494 63.8
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 2.2e-176 622.9 507 61.5
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 6.8e-173 611.3 498 60.4
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 8.8e-173 610.9 498 60.6
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 5.7e-172 608.2 498 60.4
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 5.7e-172 608.2 496 60.9
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 9.1e-170 600.9 498 60.4
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.6e-169 600.1 498 59.8
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 1.0e-168 597.4 487 62.4
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 6.5e-168 594.7 507 60.0
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 1.5e-167 593.6 497 60.0
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 7.2e-167 591.3 511 58.5
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 8.0e-166 587.8 498 60.6
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.4e-165 587.0 498 60.4
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 1.2e-164 583.9 501 55.1
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 2.8e-163 579.3 496 58.9
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 3.1e-162 575.9 496 58.3
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 1.2e-161 573.9 497 59.6
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 2.7e-161 572.8 504 56.5
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 2.7e-161 572.8 499 57.3
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 3.5e-161 572.4 496 58.3
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 3.5e-161 572.4 507 55.0
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 4.5e-161 572.0 511 56.2
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 2.3e-160 569.7 497 58.4
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 6.6e-160 568.2 497 58.1
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 1.5e-159 567.0 492 56.9
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 3.3e-159 565.8 517 55.1
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 7.3e-159 564.7 501 57.5
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 7.3e-159 564.7 391 67.5
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 2.1e-158 563.1 509 55.8
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 2.0e-156 556.6 497 56.7
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 2.6e-156 556.2 480 57.7
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 1.1e-154 550.8 484 55.8
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 2.0e-153 546.6 466 60.7
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 3.5e-153 545.8 550 50.7
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 2.3e-152 543.1 496 53.8
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 1.9e-151 540.0 501 54.3
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 9.2e-146 521.2 555 51.2
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 6.0e-145 518.5 401 63.6
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 1.7e-144 516.9 529 51.2
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 4.3e-143 512.3 497 52.7
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 1.4e-141 507.3 499 51.9
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 5.2e-141 505.4 591 48.6
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 1.2e-140 504.2 493 53.5
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 7.5e-140 501.5 387 64.9
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.9e-138 496.9 478 56.5
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 7.1e-138 495.0 502 50.2
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 2.1e-137 493.4 499 52.9
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 2.7e-137 493.0 499 50.7
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 7.8e-137 491.5 501 52.7
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 1.7e-136 490.3 413 60.3
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 2.3e-136 490.0 493 52.1
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 8.6e-136 488.0 501 49.1
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 4.0e-133 479.2 501 49.3
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 4.0e-133 479.2 543 49.0
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 2.6e-132 476.5 494 48.6
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 2.6e-132 476.5 499 48.9
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 2.2e-131 473.4 506 48.0
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 4.9e-131 472.2 513 50.3
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 6.4e-131 471.9 496 48.8
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 8.4e-131 471.5 500 48.2
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 8.4e-131 471.5 501 48.5
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.1e-130 471.1 439 56.7
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 1.4e-130 470.7 503 51.3
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 3.2e-130 469.5 501 48.3
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 1.6e-129 467.2 387 62.3
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 7.8e-129 464.9 498 48.2
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 3.0e-128 463.0 529 47.8
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 5.6e-127 458.8 505 49.7
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 1.1e-125 454.5 541 45.7
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 1.1e-125 454.5 548 45.3
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.9e-123 446.4 495 48.9
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 4.9e-123 445.7 325 66.2
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 3.5e-121 439.5 509 47.0
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 2.3e-120 436.8 500 48.0
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 8.7e-120 434.9 489 46.6
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 4.3e-119 432.6 527 46.9
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 2.1e-118 430.3 485 49.9
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 2.9e-115 419.9 492 46.3
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 9.3e-114 414.8 498 45.2
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 4.6e-113 412.5 327 60.9
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 4.0e-109 399.4 306 66.0
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 4.8e-102 375.9 314 60.2
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 3.2e-98 363.2 265 66.0
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 5.3e-93 345.9 316 56.6
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 1.3e-91 341.3 316 56.3
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 3.8e-91 339.7 496 38.7
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 7.9e-89 332.0 289 55.7
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 1.7e-86 324.3 327 53.8
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 2.4e-77 293.9 267 54.3
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 7.4e-71 272.3 191 68.1
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 5.3e-69 266.2 404 38.6
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 1.6e-68 264.6 204 61.3
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 2.6e-68 263.8 156 76.9
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 3.6e-65 253.4 184 65.2
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 1.6e-60 238.0 392 36.5
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 5.0e-59 233.0 244 50.4
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.5e-58 231.5 212 56.1
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 8.3e-54 215.7 168 61.9
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-43 180.6 353 33.4
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 2.9e-43 180.6 186 50.0
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 2.5e-34 151.0 148 50.0
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 5.8e-31 139.8 190 42.6
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 2.0e-23 114.8 85 62.4
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 4.9e-22 110.2 133 45.1
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 1.7e-19 101.7 354 26.6
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 3.0e-19 100.9 91 56.0
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 4.7e-17 93.6 293 27.0
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 1.2e-15 89.0 159 36.5
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 3.8e-14 84.0 124 38.7
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 1.9e-13 81.6 53 67.9
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 4.2e-13 80.5 79 48.1
Peaxi162Scf00559g00110 Petunia axillaris HOM05D006389 ORTHO05D007863 7.8e-12 76.3 67 50.7
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 1.4e-08 65.5 53 56.6
QL01p005881 Quercus lobata HOM05D006389 ORTHO05D007863 3.4e-07 60.8 79 45.6


User provided reference genes

Program Settings