Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 9.9e-68 260.0 132 100.0
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 3.4e-60 235.0 132 89.4
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 8.1e-54 213.8 130 78.5
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 1.3e-51 206.5 131 76.3
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 3.8e-51 204.9 131 75.6
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 4.9e-51 204.5 132 76.5
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 1.9e-50 202.6 126 80.2
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 1.2e-49 199.9 132 74.2
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 2.1e-49 199.1 129 75.2
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 4.6e-49 198.0 129 72.9
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 6.0e-49 197.6 120 77.5
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 1.0e-48 196.8 123 78.0
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 1.0e-48 196.8 131 70.2
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 1.3e-48 196.4 130 73.8
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.8e-48 196.1 129 74.4
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 1.8e-48 196.1 129 73.6
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 8.7e-48 193.7 130 74.6
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 1.1e-47 193.4 122 76.2
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 1.1e-47 193.4 129 72.9
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 1.5e-47 193.0 129 71.3
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.5e-47 192.2 124 73.4
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.5e-47 192.2 124 73.4
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 4.3e-47 191.4 122 72.1
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 5.6e-47 191.0 126 69.8
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 5.6e-47 191.0 129 73.6
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 5.6e-47 191.0 148 67.6
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 5.6e-47 191.0 129 68.2
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 7.4e-47 190.7 132 72.0
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.1e-46 189.1 129 72.9
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 2.1e-46 189.1 126 71.4
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 2.8e-46 188.7 129 69.8
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 3.7e-46 188.3 132 69.7
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 4.8e-46 188.0 122 73.8
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 6.2e-46 187.6 132 66.7
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 8.2e-46 187.2 129 72.1
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 1.4e-45 186.4 126 69.0
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 5.3e-45 184.5 126 71.4
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 5.3e-45 184.5 133 68.4
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 6.9e-45 184.1 121 70.2
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 6.9e-45 184.1 126 68.3
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 9.0e-45 183.7 125 72.0
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 1.5e-44 183.0 129 66.7
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 3.4e-44 181.8 129 65.9
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 3.4e-44 181.8 132 65.2
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 4.5e-44 181.4 127 65.4
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 7.6e-44 180.6 128 68.0
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 1.0e-43 180.3 129 66.7
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 1.0e-43 180.3 122 72.1
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 1.3e-43 179.9 126 68.3
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 2.2e-43 179.1 129 65.1
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 2.2e-43 179.1 129 65.1
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 2.2e-43 179.1 126 68.3
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 2.9e-43 178.7 129 65.1
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 2.9e-43 178.7 129 65.1
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 2.9e-43 178.7 129 65.1
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 4.9e-43 177.9 130 64.6
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 4.9e-43 177.9 129 65.9
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 4.9e-43 177.9 121 71.1
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 4.9e-43 177.9 126 66.7
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 6.5e-43 177.6 127 67.7
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 6.5e-43 177.6 129 64.3
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 6.5e-43 177.6 121 70.2
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 8.4e-43 177.2 126 67.5
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 8.4e-43 177.2 129 64.3
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 1.4e-42 176.4 126 69.0
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.4e-42 176.4 121 70.2
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 4.2e-42 174.9 126 68.3
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 5.5e-42 174.5 121 71.9
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 7.1e-42 174.1 129 64.3
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 9.3e-42 173.7 115 72.2
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 9.3e-42 173.7 124 70.2
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.6e-41 172.9 123 66.7
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 1.6e-41 172.9 124 68.5
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 1.6e-41 172.9 128 65.6
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 2.7e-41 172.2 122 67.2
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 6.0e-41 171.0 124 68.5
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 1.0e-40 170.2 120 65.8
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.0e-40 170.2 123 65.0
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.0e-40 170.2 107 76.6
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.8e-40 169.5 128 64.1
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 3.0e-40 168.7 122 64.8
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 5.1e-40 167.9 107 75.7
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 1.9e-39 166.0 125 66.4
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 2.2e-38 162.5 171 52.0
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 2.2e-38 162.5 120 65.0
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 4.8e-38 161.4 120 65.8
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 1.1e-37 160.2 120 65.0
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 1.8e-37 159.5 151 57.6
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 7.6e-36 154.1 122 62.3
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 2.9e-35 152.1 97 79.4
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 5.0e-35 151.4 103 74.8
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 5.5e-34 147.9 98 70.4
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 9.3e-34 147.1 168 50.0
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 9.3e-34 147.1 103 66.0
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.2e-33 146.7 104 67.3
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 2.1e-33 146.0 104 70.2
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 1.5e-31 139.8 96 71.9
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 3.3e-31 138.7 101 70.3
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 4.3e-31 138.3 131 55.7
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 5.7e-31 137.9 96 67.7
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 9.7e-31 137.1 103 68.0
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 4.8e-30 134.8 120 51.7
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.8e-29 132.9 99 62.6
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 4.1e-29 131.7 99 61.6
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 5.3e-29 131.3 122 49.2
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.2e-28 130.2 99 61.6
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 4.5e-28 128.3 121 51.2
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 1.0e-27 127.1 94 66.0
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.1e-26 123.6 98 65.3
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 3.6e-25 118.6 92 67.4
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 3.9e-24 115.2 90 65.6
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 4.4e-23 111.7 136 47.1
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 4.5e-20 101.7 71 67.6
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.3e-19 100.1 98 54.1
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 3.8e-19 98.6 74 64.9
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 8.5e-19 97.4 101 43.6
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 7.2e-18 94.4 102 44.1
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 6.1e-17 91.3 90 55.6
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 2.6e-12 75.9 61 60.7
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 1.0e-11 73.9 57 57.9
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 3.6e-09 65.5 116 25.9


User provided reference genes

Program Settings