Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0406 Trochodendron aralioides HOM05D006097 ORTHO05D008538 6.2e-202 707.2 351 100.0
GSVIVG01013488001 Vitis vinifera HOM05D006097 ORTHO05D008538 1.2e-168 596.7 351 82.9
CiPaw.14G007600 Carya illinoinensis HOM05D006097 ORTHO05D008538 4.4e-163 578.2 351 79.2
Dinv22036 Davidia involucrata HOM05D006097 ORTHO05D008538 5.7e-163 577.8 351 79.2
QL04p017855 Quercus lobata HOM05D006097 ORTHO05D008538 1.1e-161 573.5 350 79.7
Haze_03039 Corylus avellana HOM05D006097 ORTHO05D008538 2.0e-160 569.3 350 78.0
PSO339G1331 Papaver somniferum HOM05D006097 ORTHO05D008538 1.0e-159 567.0 350 78.3
Nn2g14836 Nelumbo nucifera HOM05D006097 ORTHO05D008538 1.9e-158 562.8 351 78.3
COL.COLO4_20657 Corchorus olitorius HOM05D006097 ORTHO05D008538 8.0e-157 557.4 351 77.8
Cfa010917 Carpinus fangiana HOM05D006097 ORTHO05D008538 1.0e-156 557.0 381 72.7
Thecc.10G154600 Theobroma cacao HOM05D006097 ORTHO05D008538 6.7e-156 554.3 351 77.2
Prupe.2G036100 Prunus persica HOM05D006097 ORTHO05D008538 2.0e-155 552.7 351 76.4
Aqoxy2G00367 Aquilegia oxysepala HOM05D006097 ORTHO05D008538 2.6e-155 552.4 351 78.1
Potri.003G196300 Populus trichocarpa HOM05D006097 ORTHO05D008538 2.6e-155 552.4 351 77.2
Duzib114G0946 Durio zibethinus HOM05D006097 ORTHO05D008538 5.7e-155 551.2 351 76.6
MD07G1040200 Malus domestica HOM05D006097 ORTHO05D008538 1.3e-154 550.1 351 76.6
Peaxi162Scf00767g00518 Petunia axillaris HOM05D006097 ORTHO05D008538 4.8e-154 548.1 349 75.1
Hma1.2p1_1627F.1_g294440 Hydrangea macrophylla HOM05D006097 ORTHO05D008538 1.1e-153 547.0 351 76.6
Actinidia21518 Actinidia chinensis HOM05D006097 ORTHO05D008538 1.8e-153 546.2 351 77.2
Atru.chr7.628 Acer truncatum HOM05D006097 ORTHO05D008538 4.1e-153 545.0 351 75.5
Migut.N01845 Erythranthe guttata HOM05D006097 ORTHO05D008538 4.1e-153 545.0 349 73.9
Eucgr.G03235 Eucalyptus grandis HOM05D006097 ORTHO05D008538 4.1e-153 545.0 351 75.2
Nitab4.5_0001621g0010 Nicotiana tabacum HOM05D006097 ORTHO05D008538 4.1e-153 545.0 349 75.1
Manes.04G159300 Manihot esculenta HOM05D006097 ORTHO05D008538 9.1e-153 543.9 351 76.1
Ciclev10004623m.g Citrus clementina HOM05D006097 ORTHO05D008538 2.0e-152 542.7 351 74.9
PGSC0003DMG400025223 Solanum tuberosum HOM05D006097 ORTHO05D008538 2.0e-152 542.7 349 74.8
Gohir.D06G184900 Gossypium hirsutum HOM05D006097 ORTHO05D008538 1.1e-150 537.0 351 75.2
CAN.G176.2 Capsicum annuum HOM05D006097 ORTHO05D008538 3.2e-150 535.4 349 73.9
Sopen08g005450 Solanum pennellii HOM05D006097 ORTHO05D008538 5.5e-150 534.6 349 73.9
ECA236G3136 Erigeron canadensis HOM05D006097 ORTHO05D008538 1.6e-149 533.1 351 72.4
Solyc08g014470.4 Solanum lycopersicum HOM05D006097 ORTHO05D008538 2.7e-149 532.3 349 74.2
Gorai.010G216200 Gossypium raimondii HOM05D006097 ORTHO05D008538 3.6e-149 531.9 353 74.8
Sabra03G0146400 Salix brachista HOM05D006097 ORTHO05D008538 6.1e-149 531.2 393 69.0
CsaV3_5G036770 Cucumis sativus L. HOM05D006097 ORTHO05D008538 1.0e-148 530.4 350 72.6
Gohir.A06G175000 Gossypium hirsutum HOM05D006097 ORTHO05D008538 1.8e-148 529.6 351 74.4
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 2.3e-148 529.3 351 72.6
Hund13358 Selenicereus undatus HOM05D006097 ORTHO05D008538 4.0e-148 528.5 349 73.6
Lj3g0013868 Lotus japonicus HOM05D006097 ORTHO05D008538 6.8e-148 527.7 350 72.6
RcHm_v2.0_Chr1g0324291 Rosa chinensis HOM05D006097 ORTHO05D008538 7.5e-147 524.2 351 73.5
FAN01G0546 Fragaria x ananassa HOM05D006097 ORTHO05D008538 9.8e-147 523.9 351 72.6
HanXRQChr04g0113861 Helianthus annuus HOM05D006097 ORTHO05D008538 2.2e-146 522.7 351 72.1
Lalb_Chr19g0132421 Lupinus albus HOM05D006097 ORTHO05D008538 2.2e-146 522.7 351 71.5
SGA_v2.0_scaffold232G43504 Striga asiatica HOM05D006097 ORTHO05D008538 2.8e-146 522.3 349 72.2
CANSAT56G2143 Cannabis sativa HOM05D006097 ORTHO05D008538 8.3e-146 520.8 350 71.4
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 1.8e-145 519.6 352 72.2
Sc07g0002170 Simmondsia chinensis HOM05D006097 ORTHO05D008538 1.8e-145 519.6 349 71.1
Glyma.13G197200 Glycine max HOM05D006097 ORTHO05D008538 2.4e-145 519.2 349 71.6
TPR.G17806 Trifolium pratense HOM05D006097 ORTHO05D008538 5.4e-145 518.1 351 70.9
Cc02_g30220 Coffea canephora HOM05D006097 ORTHO05D008538 1.2e-144 516.9 351 72.1
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 7.7e-144 514.2 343 72.9
Psat5g221440 Pisum sativum HOM05D006097 ORTHO05D008538 1.3e-143 513.5 351 69.5
MBI19_g07612_MAGBIO Magnolia biondii HOM05D006097 ORTHO05D008538 3.8e-143 511.9 446 61.9
Thhalv10010237m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 6.6e-143 511.1 351 70.9
PGR031G1965 Punica granatum HOM05D006097 ORTHO05D008538 1.5e-142 510.0 351 72.1
Medtr3g014750 Medicago truncatula HOM05D006097 ORTHO05D008538 2.5e-142 509.2 351 70.1
Ah.12g062830 Amaranthus hybridus HOM05D006097 ORTHO05D008538 3.3e-142 508.8 348 71.0
THA.LOC104826726 Tarenaya hassleriana HOM05D006097 ORTHO05D008538 3.3e-142 508.8 351 70.4
DCAR_031244 Daucus carota HOM05D006097 ORTHO05D008538 4.2e-142 508.4 349 70.8
SalBow6G4726 Salvia bowleyana HOM05D006097 ORTHO05D008538 5.5e-142 508.1 371 66.3
arahy.Tifrunner.gnm1.ann1.HF4B4K Arachis hypogaea HOM05D006097 ORTHO05D008538 3.6e-141 505.4 365 67.4
BraA04t16135Z Brassica rapa HOM05D006097 ORTHO05D008538 1.0e-140 503.8 351 69.2
AUR62032650 Chenopodium quinoa HOM05D006097 ORTHO05D008538 4.0e-140 501.9 348 68.4
Sp5g06630 Schrenkiella parvula HOM05D006097 ORTHO05D008538 4.0e-140 501.9 351 69.5
ATR0745G019 Amborella trichopoda HOM05D006097 ORTHO05D008538 3.4e-139 498.8 351 68.9
A04p04190 Brassica napus HOM05D006097 ORTHO05D008538 3.4e-139 498.8 351 68.4
C04p36530 Brassica napus HOM05D006097 ORTHO05D008538 5.7e-139 498.0 351 68.7
BcaC02g09793 Brassica carinata HOM05D006097 ORTHO05D008538 2.8e-138 495.7 351 68.4
BcaB02g08396 Brassica carinata HOM05D006097 ORTHO05D008538 8.3e-138 494.2 351 67.8
EL10Ac2g02801 Beta vulgaris HOM05D006097 ORTHO05D008538 9.2e-137 490.7 406 60.6
Aa31LG10G10820 Aethionema arabicum HOM05D006097 ORTHO05D008538 1.6e-136 490.0 351 68.4
Carub.0005s2263 Capsella rubella HOM05D006097 ORTHO05D008538 2.7e-136 489.2 351 68.1
AUR62037188 Chenopodium quinoa HOM05D006097 ORTHO05D008538 7.8e-136 487.6 348 67.2
BolC4t25143H Brassica oleracea HOM05D006097 ORTHO05D008538 1.3e-135 486.9 369 65.3
AL5G37140 Arabidopsis lyrata HOM05D006097 ORTHO05D008538 1.7e-135 486.5 351 68.1
CSS0004732 Camellia sinensis var. sinensis HOM05D006097 ORTHO05D008538 4.3e-134 481.9 351 69.2
AT3G55850 Arabidopsis thaliana HOM05D006097 ORTHO05D008538 3.6e-133 478.8 377 64.7
unitig_52.g17390 Utricularia gibba HOM05D006097 ORTHO05D008538 3.6e-133 478.8 364 64.6
CARHR165960 Cardamine hirsuta HOM05D006097 ORTHO05D008538 2.3e-132 476.1 350 67.1
ClCG05G026810 Citrullus lanatus HOM05D006097 ORTHO05D008538 2.3e-132 476.1 357 66.1
AUR62026861 Chenopodium quinoa HOM05D006097 ORTHO05D008538 1.5e-131 473.4 348 65.8
HPP92_013975 Vanilla planifolia HOM05D006097 ORTHO05D008538 2.0e-131 473.0 351 65.5
Hma1.2p1_1627F.1_g294450 Hydrangea macrophylla HOM05D006097 ORTHO05D008538 2.4e-129 466.1 351 67.8
SEGI_19069 Sequoiadendron giganteum HOM05D006097 ORTHO05D008538 1.9e-126 456.4 351 63.0
Os01g0952700 Oryza sativa ssp. japonica HOM05D006097 ORTHO05D008538 8.0e-125 451.1 351 62.4
Phvul.011G206500 Phaseolus vulgaris HOM05D006097 ORTHO05D008538 3.1e-116 422.5 291 69.4
VMungo1127G1698 Vigna mungo HOM05D006097 ORTHO05D008538 1.4e-113 413.7 271 73.4
Sed0002543 Sechium edule HOM05D006097 ORTHO05D008538 4.6e-112 408.7 359 59.6
vmacro12697 Vaccinium macrocarpon HOM05D006097 ORTHO05D008538 7.8e-112 407.9 267 73.8
arahy.Tifrunner.gnm1.ann1.RMFD7W Arachis hypogaea HOM05D006097 ORTHO05D008538 1.5e-110 403.7 353 59.5
Lj9A654G51 Lonicera japonica HOM05D006097 ORTHO05D008538 1.1e-105 387.5 239 77.0
Mapoly0021s0162 Marchantia polymorpha HOM05D006097 ORTHO05D008538 2.4e-100 369.8 349 52.1
MELO3C012474.2 Cucumis melo HOM05D006097 ORTHO05D008538 1.6e-96 357.1 239 71.5
SMO367G1089 Selaginella moellendorffii HOM05D006097 ORTHO05D008538 1.3e-93 347.4 349 50.4
Pp3c20_1490 Physcomitrium patens HOM05D006097 ORTHO05D008538 1.2e-91 340.9 342 50.0
AagrBONN_evm.TU.Sc2ySwM_340.253 Anthoceros agrestis HOM05D006097 ORTHO05D008538 2.7e-88 329.7 334 50.3
QL04p017846 Quercus lobata HOM05D006097 ORTHO05D008538 5.1e-87 325.5 209 74.6
Zm00001eb140700 Zea mays HOM05D006097 ORTHO05D008538 1.9e-86 323.6 249 63.1
CDE06G1230 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 1.7e-82 310.5 271 57.6
Ca_26912_v3 Cicer arietinum L. HOM05D006097 ORTHO05D008538 3.7e-69 266.2 185 67.6
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 6.9e-60 235.3 217 57.6
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 3.8e-58 229.6 328 41.5
Glyma.15G235400 Glycine max HOM05D006097 ORTHO05D008538 1.1e-57 228.0 292 43.5
FAN10G0529 Fragaria x ananassa HOM05D006097 ORTHO05D008538 1.5e-54 217.6 503 33.0
MCO06G284 Micromonas commoda HOM05D006097 ORTHO05D008538 8.2e-53 211.8 372 37.6
QL04p017840 Quercus lobata HOM05D006097 ORTHO05D008538 1.1e-52 211.5 124 80.6
Oeu048573.1 Olea europaea HOM05D006097 ORTHO05D008538 3.8e-50 203.0 135 69.6
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 6.1e-48 195.7 294 41.2
Cre06.g279350 Chlamydomonas reinhardtii HOM05D006097 ORTHO05D008538 1.3e-34 151.4 323 32.5
Ca_03883_v3 Cicer arietinum L. HOM05D006097 ORTHO05D008538 2.5e-33 147.1 97 72.2
Nn2g16009 Nelumbo nucifera HOM05D006097 ORTHO05D008538 1.7e-29 134.4 90 70.0
PRCOL_00006109 Prasinoderma coloniale HOM05D006097 ORTHO05D008538 2.4e-28 130.6 278 34.9
Cre07.g313350 Chlamydomonas reinhardtii HOM05D006097 ORTHO05D008538 1.3e-26 124.8 344 29.1
Thhalv10010899m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 1.5e-25 121.3 84 69.0
Pp3s32_630 Physcomitrium patens HOM05D006097 ORTHO05D008538 4.0e-23 113.2 333 28.8
CDE06G2151 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 7.5e-22 109.0 82 64.6
SMO197G0087 Selaginella moellendorffii HOM05D003320 ORTHO05D003941 1.8e-20 104.4 170 41.2
SMO274G0019 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 7.8e-19 99.0 112 44.6
SMO212G0005 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 6.6e-18 95.9 150 40.7
SMO005G0015 Selaginella moellendorffii HOM05D006097 ORTHO05D011308 8.6e-18 95.5 105 46.7
Lj9A654T55 Lonicera japonica HOM05D006097 ORTHO05D008538 2.5e-17 94.0 55 83.6
SMO009G0029 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 2.5e-17 94.0 113 46.0
SMO125G0001 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 3.3e-17 93.6 169 37.3
Nn313s46297 Nelumbo nucifera HOM05D006097 ORTHO05D008538 4.6e-11 73.2 46 76.1
CDE06G1678 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 3.0e-10 70.5 55 60.0
Medtr1224s0010 Medicago truncatula HOM05D006097 ORTHO05D008538 1.5e-09 68.2 353 26.1
BolC8t50740H Brassica oleracea HOM05D035890 ORTHO05D033370 5.2e-07 59.7 42 66.7


User provided reference genes

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