Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0254 Trochodendron aralioides HOM05D004363 ORTHO05D005110 0.0e+00 1146.3 571 100.0
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 0.0e+00 1137.1 567 99.6
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 0.0e+00 1085.1 568 94.9
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 9.8e-213 743.8 577 67.1
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 1.7e-209 733.0 566 65.7
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 1.1e-208 730.3 569 64.9
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 6.1e-207 724.5 569 64.7
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 1.4e-203 713.4 568 64.1
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 1.2e-202 710.3 569 64.3
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 2.9e-201 705.7 569 63.3
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 4.7e-199 698.4 567 63.5
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 1.6e-194 683.3 569 60.5
Thecc.05G106200 Theobroma cacao HOM05D004363 ORTHO05D005110 1.6e-194 683.3 570 60.9
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 6.0e-194 681.4 570 61.8
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 1.3e-193 680.2 570 60.4
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 1.3e-193 680.2 570 60.4
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 2.3e-193 679.5 567 62.1
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 6.6e-193 677.9 568 61.8
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 3.6e-191 672.2 570 59.8
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 4.7e-191 671.8 535 63.0
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 8.0e-191 671.0 571 61.3
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 2.6e-189 666.0 579 60.4
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 8.3e-188 661.0 569 59.2
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 1.1e-187 660.6 582 60.0
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.4e-187 660.2 570 58.9
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 5.4e-187 658.3 567 58.9
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 7.1e-187 657.9 568 60.6
FAN05G1872 Fragaria x ananassa HOM05D004363 ORTHO05D005110 9.2e-187 657.5 578 60.0
FAN05G3395 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.6e-186 656.8 582 59.6
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 1.4e-182 643.7 567 58.0
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 1.5e-181 640.2 568 56.7
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 9.9e-181 637.5 570 58.1
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 1.7e-180 636.7 565 58.4
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 2.2e-180 636.3 570 56.7
Gohir.D04G092000 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.4e-179 633.6 572 57.3
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 7.1e-179 631.3 567 57.0
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 1.2e-178 630.6 566 57.8
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 7.8e-178 627.9 570 57.0
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 3.0e-177 625.9 568 56.2
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 5.1e-177 625.2 580 56.6
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 6.6e-177 624.8 569 55.9
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 1.1e-176 624.0 569 55.4
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 3.6e-175 619.0 568 56.2
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 4.7e-175 618.6 568 56.5
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 6.2e-175 618.2 570 54.9
Nitab4.5_0001191g0010 Nicotiana tabacum HOM05D004363 ORTHO05D005110 4.4e-173 612.1 574 54.7
Nitab4.5_0001177g0040 Nicotiana tabacum HOM05D004363 ORTHO05D005110 6.4e-172 608.2 566 54.2
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 3.2e-171 605.9 570 54.7
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 2.1e-170 603.2 568 55.8
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 3.5e-170 602.4 632 51.9
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 1.3e-169 600.5 569 55.7
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 6.6e-169 598.2 572 55.2
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 1.9e-168 596.7 571 53.4
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 2.5e-168 596.3 569 53.8
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 2.5e-168 596.3 568 53.5
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 4.3e-168 595.5 568 53.9
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 7.3e-168 594.7 568 54.0
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 9.6e-168 594.3 570 53.3
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 2.1e-167 593.2 568 54.8
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 8.1e-167 591.3 568 53.3
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 1.4e-166 590.5 627 51.5
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 3.4e-165 585.9 569 52.7
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 1.3e-164 583.9 573 54.1
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 1.3e-164 583.9 570 54.4
Peaxi162Scf00582g00064 Petunia axillaris HOM05D004363 ORTHO05D005110 2.9e-164 582.8 568 53.0
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 3.8e-164 582.4 628 50.8
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 6.4e-164 581.6 573 53.9
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 1.1e-163 580.9 570 53.3
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 1.1e-163 580.9 570 52.8
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 1.2e-162 577.4 566 53.4
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 3.5e-162 575.9 570 53.2
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 4.6e-162 575.5 568 53.2
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 6.6e-161 571.6 568 52.1
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 1.5e-157 560.5 571 53.2
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 2.6e-157 559.7 571 51.1
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 1.1e-155 554.3 570 51.6
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 2.7e-154 549.7 565 50.6
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 1.0e-153 547.7 572 51.0
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 2.3e-153 546.6 570 51.1
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 1.5e-152 543.9 571 51.1
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 8.1e-151 538.1 570 50.9
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 5.3e-150 535.4 572 50.7
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 5.3e-150 535.4 572 50.7
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 9.0e-150 534.6 570 50.5
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 4.5e-149 532.3 565 50.6
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 6.5e-148 528.5 570 50.4
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 1.1e-147 527.7 575 48.9
Gohir.A04G054800 Gossypium hirsutum HOM05D004363 ORTHO05D005110 7.9e-146 521.5 452 59.3
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 1.3e-145 520.8 571 50.6
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 4.3e-144 515.8 593 49.2
Cpa.g.sc104.13 Carica papaya HOM05D004363 ORTHO05D005110 7.4e-144 515.0 465 57.6
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 2.1e-143 513.5 558 48.4
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 3.2e-139 499.6 539 49.2
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 1.0e-137 494.6 570 49.3
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 1.8e-137 493.8 381 64.3
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 1.6e-135 487.3 570 46.7
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 6.3e-135 485.3 568 47.9
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 2.2e-132 476.9 380 63.2
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 2.5e-131 473.4 566 45.9
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 9.4e-131 471.5 573 46.8
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 3.7e-127 459.5 572 45.1
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 5.3e-126 455.7 567 46.2
unitig_578.g15812 Utricularia gibba HOM05D004363 ORTHO05D005110 3.4e-125 453.0 564 44.0
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 7.7e-125 451.8 382 60.5
Dinv12347 Davidia involucrata HOM05D004363 ORTHO05D005110 2.7e-122 443.4 354 64.1
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 3.3e-120 436.4 366 61.7
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 5.7e-120 435.6 649 41.9
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 3.6e-114 416.4 399 54.4
Ah.07g203620 Amaranthus hybridus HOM05D004363 ORTHO05D005110 3.4e-104 383.3 344 57.8
Actinidia03876 Actinidia chinensis HOM05D004363 ORTHO05D005110 3.0e-97 360.1 415 47.2
Hma1.2p1_0064F.1_g034600 Hydrangea macrophylla HOM05D004363 ORTHO05D005110 6.8e-97 359.0 295 60.0
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 4.9e-87 326.2 595 36.0
Mapoly0053s0062 Marchantia polymorpha HOM05D004363 ORTHO05D005110 3.7e-79 300.1 624 32.4
Actinidia03984 Actinidia chinensis HOM05D004363 ORTHO05D005110 4.6e-77 293.1 286 53.5
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 8.4e-63 245.7 446 36.1
CBR_g74641 Chara braunii HOM05D004363 ORTHO05D005110 1.4e-62 245.0 694 28.2
Nn3g20229 Nelumbo nucifera HOM05D004363 ORTHO05D005110 5.6e-59 233.0 173 65.3
Ah.07g203610 Amaranthus hybridus HOM05D004363 ORTHO05D005110 5.1e-52 209.9 220 48.2
SEGI_22432 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 1.4e-41 175.3 207 46.4
Rhsim11G0045100 Rhododendron simsii HOM05D004363 ORTHO05D005110 2.0e-40 171.4 155 58.1
RcHm_v2.0_Chr3g0476311 Rosa chinensis HOM05D004363 ORTHO05D005110 7.6e-40 169.5 155 58.1
SMO196G0050 Selaginella moellendorffii HOM05D004363 ORTHO05D005110 5.8e-32 143.3 212 36.3
Cre01.g024400 Chlamydomonas reinhardtii HOM05D004363 ORTHO05D005110 2.5e-22 111.3 258 29.5
ATR0820G261 Amborella trichopoda HOM05D004363 ORTHO05D005110 3.0e-20 104.4 202 37.1
SHI08962 Sapria himalayana HOM05D004363 ORTHO05D005110 3.0e-20 104.4 228 36.0
SHI08961 Sapria himalayana HOM05D004363 ORTHO05D005110 4.2e-14 84.0 126 39.7


User provided reference genes

Program Settings