Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 6.0e-169 597.4 301 100.0
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 5.4e-154 547.7 303 92.7
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 3.1e-141 505.4 303 82.8
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.3e-139 500.0 300 82.7
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 8.4e-139 497.3 303 82.5
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.4e-138 496.5 303 81.5
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 2.4e-138 495.7 301 83.1
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 2.4e-138 495.7 303 81.5
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 3.2e-138 495.4 303 81.2
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 7.1e-138 494.2 301 82.1
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 7.1e-138 494.2 303 79.9
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 7.1e-138 494.2 303 79.9
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.2e-137 493.4 301 83.1
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 2.7e-137 492.3 303 80.9
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 6.0e-137 491.1 302 80.5
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 6.0e-137 491.1 301 80.7
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 1.8e-136 489.6 301 81.1
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 3.0e-136 488.8 303 79.2
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 5.1e-136 488.0 304 80.9
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 5.1e-136 488.0 303 79.9
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 8.7e-136 487.3 303 78.9
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.5e-135 486.5 301 80.7
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 1.5e-135 486.5 301 80.7
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 9.6e-135 483.8 302 79.8
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.3e-134 483.4 303 80.2
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.3e-134 483.4 300 79.0
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 2.1e-134 482.6 303 79.2
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.1e-134 482.6 303 78.9
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 2.8e-134 482.3 303 77.9
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 8.1e-134 480.7 303 80.2
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 8.1e-134 480.7 303 78.5
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.1e-133 480.3 301 79.7
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 1.4e-133 479.9 303 78.5
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 1.8e-133 479.6 303 78.2
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.4e-133 479.2 303 77.6
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 4.0e-133 478.4 303 78.2
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 4.0e-133 478.4 303 76.6
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 6.9e-133 477.6 299 78.9
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 6.9e-133 477.6 303 78.9
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 9.0e-133 477.2 303 78.2
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.5e-132 476.5 303 76.6
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.5e-132 476.5 303 76.6
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 2.0e-132 476.1 303 79.2
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 3.4e-132 475.3 303 76.9
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 7.6e-132 474.2 303 78.2
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 9.9e-132 473.8 311 78.1
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 3.8e-131 471.9 293 81.6
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 3.8e-131 471.9 303 77.9
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.9e-131 471.5 303 77.6
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.4e-130 469.9 303 78.5
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.4e-130 469.9 303 78.5
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.9e-130 469.5 300 78.3
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 1.9e-130 469.5 303 76.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 2.4e-130 469.2 303 78.5
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.4e-130 469.2 303 76.9
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 2.4e-130 469.2 303 76.9
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 4.2e-130 468.4 303 79.5
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 7.1e-130 467.6 303 76.6
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.2e-129 466.8 301 77.1
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.0e-128 463.8 295 76.6
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 3.0e-128 462.2 301 76.4
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 1.1e-125 453.8 303 72.9
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 1.8e-125 453.0 301 75.4
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 3.1e-125 452.2 303 74.3
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 2.6e-124 449.1 303 74.3
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.1e-122 443.7 300 73.3
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 3.2e-122 442.2 305 72.5
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 9.3e-122 440.7 301 72.8
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 1.0e-120 437.2 300 73.0
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.3e-120 436.8 306 71.9
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.3e-120 436.0 302 71.5
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.3e-120 436.0 306 72.2
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 3.0e-120 435.6 300 72.3
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 3.0e-120 435.6 306 72.2
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.9e-119 433.0 305 72.5
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 4.3e-119 431.8 300 71.7
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 5.7e-119 431.4 300 72.0
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 7.4e-119 431.0 303 72.3
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 9.7e-119 430.6 306 71.6
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.3e-118 430.3 300 71.3
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 3.7e-118 428.7 300 71.3
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 4.8e-118 428.3 300 71.7
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 4.8e-118 428.3 300 71.7
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 4.8e-118 428.3 300 71.7
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 8.2e-118 427.6 300 71.0
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 8.2e-118 427.6 300 70.7
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.8e-117 426.4 300 70.7
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 3.1e-117 425.6 300 71.7
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 4.1e-117 425.2 300 72.0
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 5.3e-117 424.9 300 71.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 5.3e-117 424.9 300 71.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 5.3e-117 424.9 300 71.7
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 6.9e-117 424.5 287 72.8
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.2e-116 423.7 300 71.0
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 3.4e-116 422.2 275 78.2
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 3.0e-112 409.1 249 79.9
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 5.1e-112 408.3 251 79.3
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 3.3e-103 379.0 298 65.8
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 3.1e-101 372.5 234 76.9
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 4.1e-101 372.1 299 64.2
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 5.3e-101 371.7 249 74.7
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 3.4e-100 369.0 274 69.0
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 7.7e-100 367.9 225 79.6
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 6.5e-99 364.8 215 81.4
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 5.5e-98 361.7 235 76.2
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.2e-97 360.5 221 78.3
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 1.6e-97 360.1 305 62.0
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 8.0e-97 357.8 219 81.7
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.8e-96 356.7 225 76.0
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 5.2e-96 355.1 255 70.2
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 2.8e-86 322.8 303 60.4
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 8.2e-86 321.2 276 59.4
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 2.0e-76 290.0 339 48.7
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 1.1e-74 284.3 173 77.5
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 6.0e-60 235.3 314 43.0
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.6e-49 200.7 143 73.4
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 6.8e-48 195.3 163 62.0
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 2.1e-41 173.7 303 40.3
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 4.7e-41 172.6 343 36.2
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 8.1e-41 171.8 175 51.4
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.7e-38 164.1 103 76.7
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 3.9e-35 152.9 88 78.4
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 4.9e-30 136.0 91 73.6
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 1.3e-27 127.9 91 71.4
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 3.6e-25 119.8 355 31.8
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.4e-24 117.9 86 72.1
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 6.9e-24 115.5 72 75.0
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.2e-22 110.5 148 49.3
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.3e-17 94.7 60 66.7
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 4.5e-15 86.3 63 69.8
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 1.1e-13 81.6 46 80.4


User provided reference genes

Program Settings