Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1107 Trochodendron aralioides HOM05D003823 ORTHO05D004866 3.1e-107 391.7 188 100.0
TAR374G1522 Trochodendron aralioides HOM05D003823 ORTHO05D004866 1.1e-104 383.3 186 98.4
MBI02_g36598_MAGBIO Magnolia biondii HOM05D003823 ORTHO05D004866 2.5e-104 382.1 187 96.8
Os02g0265400 Oryza sativa ssp. japonica HOM05D003823 ORTHO05D004866 4.2e-104 381.3 187 95.7
PSO017G2864 Papaver somniferum HOM05D003823 ORTHO05D004866 4.2e-104 381.3 186 97.3
Aqoxy3G03322 Aquilegia oxysepala HOM05D003823 ORTHO05D004866 7.2e-104 380.6 186 96.8
PSO478G3470 Papaver somniferum HOM05D003823 ORTHO05D004866 1.2e-103 379.8 186 96.8
Nn4g23085 Nelumbo nucifera HOM05D003823 ORTHO05D004866 3.6e-103 378.3 188 96.3
Zm00001eb203950 Zea mays HOM05D003823 ORTHO05D004866 4.6e-103 377.9 187 95.2
ATR0564G299 Amborella trichopoda HOM05D003823 ORTHO05D004866 1.0e-102 376.7 188 95.7
Nn8g40950 Nelumbo nucifera HOM05D003823 ORTHO05D004866 1.0e-102 376.7 188 95.7
PGSC0003DMG400018144 Solanum tuberosum HOM05D003823 ORTHO05D004866 3.0e-102 375.2 185 95.7
COL.COLO4_22965 Corchorus olitorius HOM05D003823 ORTHO05D004866 5.1e-102 374.4 187 92.5
TPR.G25673 Trifolium pratense HOM05D003823 ORTHO05D004866 8.7e-102 373.6 186 94.1
Glyma.02G268600 Glycine max HOM05D003823 ORTHO05D004866 1.1e-101 373.2 187 93.0
PGR083G1126 Punica granatum HOM05D003823 ORTHO05D004866 1.1e-101 373.2 186 94.6
Solyc03g113020.3 Solanum lycopersicum HOM05D003823 ORTHO05D004866 1.1e-101 373.2 185 94.6
Sopen03g032100 Solanum pennellii HOM05D003823 ORTHO05D004866 1.1e-101 373.2 185 94.6
CiPaw.11G041500 Carya illinoinensis HOM05D003823 ORTHO05D004866 1.5e-101 372.9 187 93.6
Lalb_Chr25g0280071 Lupinus albus HOM05D003823 ORTHO05D004866 1.5e-101 372.9 186 94.1
VMungo0647G1166 Vigna mungo HOM05D003823 ORTHO05D004866 1.5e-101 372.9 187 92.5
FvH4_5g15250 Fragaria vesca HOM05D003823 ORTHO05D004866 1.9e-101 372.5 187 93.6
FAN04G0558 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.9e-101 372.5 187 93.6
FAN08G0194 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.9e-101 372.5 187 93.6
FAN13G2005 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.9e-101 372.5 187 93.6
FAN18G4237 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.9e-101 372.5 187 93.6
Phvul.008G213700 Phaseolus vulgaris HOM05D003823 ORTHO05D004866 1.9e-101 372.5 187 92.0
vmacro18202 Vaccinium macrocarpon HOM05D003823 ORTHO05D004866 1.9e-101 372.5 186 94.1
GSVIVG01020043001 Vitis vinifera HOM05D003823 ORTHO05D004866 1.9e-101 372.5 187 94.1
Cfa018968 Carpinus fangiana HOM05D000046 ORTHO05D004866 2.5e-101 372.1 185 94.6
AUR62027457 Chenopodium quinoa HOM05D003823 ORTHO05D004866 2.5e-101 372.1 184 94.6
AUR62031242 Chenopodium quinoa HOM05D003823 ORTHO05D004866 2.5e-101 372.1 184 94.6
Nitab4.5_0000785g0070 Nicotiana tabacum HOM05D003823 ORTHO05D004866 2.5e-101 372.1 185 95.1
Nitab4.5_0010010g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 2.5e-101 372.1 185 95.1
Psat2g025840 Pisum sativum HOM05D003823 ORTHO05D004866 2.5e-101 372.1 186 93.5
Ca_06062_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 3.3e-101 371.7 186 94.1
Ca_30714_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 3.3e-101 371.7 186 94.1
Manes.05G098825 Manihot esculenta HOM05D003823 ORTHO05D004866 3.3e-101 371.7 186 93.5
ClCG06G016300 Citrullus lanatus HOM05D003823 ORTHO05D004866 4.3e-101 371.3 186 93.5
MELO3C017163.2 Cucumis melo HOM05D003823 ORTHO05D004866 4.3e-101 371.3 186 93.5
CsaV3_1G002230 Cucumis sativus L. HOM05D003823 ORTHO05D004866 4.3e-101 371.3 186 93.5
Manes.14G076100 Manihot esculenta HOM05D003823 ORTHO05D004866 4.3e-101 371.3 188 94.1
CAN.G1305.7 Capsicum annuum HOM05D003823 ORTHO05D004866 5.7e-101 370.9 185 94.1
Medtr5g085380 Medicago truncatula HOM05D003823 ORTHO05D004866 5.7e-101 370.9 186 93.0
CSS0031728 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 7.4e-101 370.5 186 93.0
CSS0041610 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 7.4e-101 370.5 186 93.0
CSS0049183 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 7.4e-101 370.5 186 93.0
CANSAT80G0583 Cannabis sativa HOM05D003823 ORTHO05D004866 7.4e-101 370.5 185 94.1
Lsat_1_v5_gn_2_88881 Lactuca sativa HOM05D003823 ORTHO05D004866 7.4e-101 370.5 185 94.1
ECA238G0538 Erigeron canadensis HOM05D003823 ORTHO05D004866 9.7e-101 370.2 186 92.5
Ciclev10022411m.g Citrus clementina HOM05D003823 ORTHO05D004866 1.3e-100 369.8 187 92.5
Dinv38684 Davidia involucrata HOM05D003823 ORTHO05D004866 1.3e-100 369.8 190 93.2
Gohir.A11G029891 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.3e-100 369.8 188 94.1
HanXRQChr14g0449901 Helianthus annuus HOM05D003823 ORTHO05D004866 1.3e-100 369.8 185 93.0
Medtr3g080480 Medicago truncatula HOM05D003823 ORTHO05D004866 1.3e-100 369.8 185 93.0
Dinv06526 Davidia involucrata HOM05D003823 ORTHO05D004866 1.6e-100 369.4 185 93.0
Duzib268G0082 Durio zibethinus HOM05D003823 ORTHO05D004866 1.6e-100 369.4 186 92.5
Potri.001G354000 Populus trichocarpa HOM05D003823 ORTHO05D004866 1.6e-100 369.4 188 93.6
QL10p016165 Quercus lobata HOM05D003823 ORTHO05D004866 1.6e-100 369.4 185 93.5
Sed0017565 Sechium edule HOM05D003823 ORTHO05D004866 1.6e-100 369.4 185 93.5
Atru.chr11.1839 Acer truncatum HOM05D003823 ORTHO05D004866 2.2e-100 369.0 186 93.0
Cpa.g.sc388.5 Carica papaya HOM05D003823 ORTHO05D004866 2.2e-100 369.0 187 92.0
Lj4g0027914 Lotus japonicus HOM05D003823 ORTHO05D004866 2.2e-100 369.0 186 93.0
Peaxi162Scf00009g00217 Petunia axillaris HOM05D003823 ORTHO05D004866 2.2e-100 369.0 188 93.1
Prupe.5G189200 Prunus persica HOM05D003823 ORTHO05D004866 2.2e-100 369.0 187 92.5
Sc12g0006240 Simmondsia chinensis HOM05D003823 ORTHO05D004866 2.2e-100 369.0 186 93.0
Glyma.14G048800 Glycine max HOM05D003823 ORTHO05D004866 2.8e-100 368.6 187 92.0
MD06G1190100 Malus domestica HOM05D003823 ORTHO05D004866 2.8e-100 368.6 188 93.1
MD14G1197000 Malus domestica HOM05D003823 ORTHO05D004866 2.8e-100 368.6 188 93.1
Sabra16G0232900 Salix brachista HOM05D003823 ORTHO05D004866 2.8e-100 368.6 188 93.6
Actinidia02709 Actinidia chinensis HOM05D003823 ORTHO05D004866 3.7e-100 368.2 185 93.5
Actinidia37644 Actinidia chinensis HOM05D003823 ORTHO05D004866 3.7e-100 368.2 186 93.5
Ciclev10032832m.g Citrus clementina HOM05D003823 ORTHO05D004866 3.7e-100 368.2 186 92.5
Duzib251G0021 Durio zibethinus HOM05D003823 ORTHO05D004866 3.7e-100 368.2 186 93.0
HanXRQChr02g0056361 Helianthus annuus HOM05D003823 ORTHO05D004866 3.7e-100 368.2 185 93.0
SalBow6G5762 Salvia bowleyana HOM05D003823 ORTHO05D004866 3.7e-100 368.2 185 93.0
Ca_16285_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 4.8e-100 367.9 186 91.9
RcHm_v2.0_Chr7g0180841 Rosa chinensis HOM05D003823 ORTHO05D004866 4.8e-100 367.9 188 93.1
Thecc.03G082400 Theobroma cacao HOM05D003823 ORTHO05D004866 4.8e-100 367.9 188 94.1
Cc04_g17180 Coffea canephora HOM05D003823 ORTHO05D004866 6.3e-100 367.5 186 92.5
Gohir.D11G033300 Gossypium hirsutum HOM05D003823 ORTHO05D004866 6.3e-100 367.5 188 93.6
Gorai.007G036100 Gossypium raimondii HOM05D003823 ORTHO05D004866 6.3e-100 367.5 188 93.6
Potri.011G077900 Populus trichocarpa HOM05D003823 ORTHO05D004866 6.3e-100 367.5 188 92.6
Thecc.02G351700 Theobroma cacao HOM05D003823 ORTHO05D004866 6.3e-100 367.5 186 91.4
TWI60G1055 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 1.1e-99 366.7 188 92.0
TWI81G0804 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 1.1e-99 366.7 188 92.0
Duzib084G0821 Durio zibethinus HOM05D003823 ORTHO05D004866 1.4e-99 366.3 186 93.0
Psat5g111480 Pisum sativum HOM05D003823 ORTHO05D004866 1.4e-99 366.3 185 92.4
CDE02G3183 Ceratophyllum demersum HOM05D003823 ORTHO05D004866 1.8e-99 365.9 183 92.9
Hund02662 Selenicereus undatus HOM05D003823 ORTHO05D004866 1.8e-99 365.9 184 91.8
EL10Ac8g19266 Beta vulgaris HOM05D003823 ORTHO05D004866 2.4e-99 365.5 187 90.9
Cc07_g03190 Coffea canephora HOM05D003823 ORTHO05D004866 2.4e-99 365.5 185 92.4
Gohir.A12G166100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.4e-99 365.5 185 91.9
Gohir.D12G169500 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.4e-99 365.5 185 91.9
BcaB01g00874 Brassica carinata HOM05D003823 ORTHO05D004866 3.1e-99 365.2 187 90.9
Migut.D02333 Erythranthe guttata HOM05D003823 ORTHO05D004866 3.1e-99 365.2 184 92.4
BcaC01g01774 Brassica carinata HOM05D003823 ORTHO05D004866 5.3e-99 364.4 186 90.9
C03p72020 Brassica napus HOM05D003823 ORTHO05D004866 5.3e-99 364.4 186 90.9
BolC3t19499H Brassica oleracea HOM05D003823 ORTHO05D004866 5.3e-99 364.4 186 90.9
Oeu022626.1 Olea europaea HOM05D003823 ORTHO05D004866 5.3e-99 364.4 187 90.4
Atru.chr4.927 Acer truncatum HOM05D003823 ORTHO05D004866 9.1e-99 363.6 186 91.9
DCAR_026066 Daucus carota HOM05D003823 ORTHO05D004866 9.1e-99 363.6 186 92.5
Rhsim08G0068000 Rhododendron simsii HOM05D003823 ORTHO05D004866 9.1e-99 363.6 198 88.4
TPR.G29042 Trifolium pratense HOM05D003823 ORTHO05D004866 9.1e-99 363.6 185 91.9
CARHR156490 Cardamine hirsuta HOM05D003823 ORTHO05D004866 1.2e-98 363.2 187 89.8
Sp5g14150 Schrenkiella parvula HOM05D003823 ORTHO05D004866 1.2e-98 363.2 187 90.4
A06p19840 Brassica napus HOM05D003823 ORTHO05D004866 1.5e-98 362.8 187 90.4
BraA06t25064Z Brassica rapa HOM05D003823 ORTHO05D004866 1.5e-98 362.8 187 90.4
Eucgr.K02462 Eucalyptus grandis HOM05D003823 ORTHO05D004866 2.0e-98 362.5 206 85.4
Zm00001eb237810 Zea mays HOM05D003823 ORTHO05D004866 2.0e-98 362.5 185 92.4
Gorai.008G182100 Gossypium raimondii HOM05D003823 ORTHO05D004866 2.6e-98 362.1 185 90.8
A06p27290 Brassica napus HOM05D003823 ORTHO05D004866 3.4e-98 361.7 186 90.3
BraA06t25670Z Brassica rapa HOM05D003823 ORTHO05D004866 3.4e-98 361.7 186 90.3
Thhalv10010746m.g Eutrema salsugineum HOM05D003823 ORTHO05D004866 3.4e-98 361.7 187 89.8
Aa31LG4G16460 Aethionema arabicum HOM05D003823 ORTHO05D004866 4.5e-98 361.3 186 89.2
Rhsim08G0157700 Rhododendron simsii HOM05D003823 ORTHO05D004866 5.9e-98 360.9 186 90.3
MSTRG.9636 Avicennia marina HOM05D003823 ORTHO05D004866 7.7e-98 360.5 186 90.9
HPP92_020326 Vanilla planifolia HOM05D003823 ORTHO05D004866 7.7e-98 360.5 193 89.1
Sed0002791 Sechium edule HOM05D003823 ORTHO05D004866 1.0e-97 360.1 186 90.3
THA.LOC104819434 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 1.0e-97 360.1 187 89.8
BcaC01g02292 Brassica carinata HOM05D003823 ORTHO05D004866 1.3e-97 359.8 186 90.3
C03p66970 Brassica napus HOM05D003823 ORTHO05D004866 1.3e-97 359.8 186 90.3
BolC3t18970H Brassica oleracea HOM05D003823 ORTHO05D004866 1.3e-97 359.8 186 90.3
Migut.D02334 Erythranthe guttata HOM05D003823 ORTHO05D004866 3.8e-97 358.2 186 90.3
Dinv19933 Davidia involucrata HOM05D003823 ORTHO05D004866 5.0e-97 357.8 184 91.8
BcaB02g10689 Brassica carinata HOM05D003823 ORTHO05D004866 4.2e-96 354.8 186 88.7
AL5G27100 Arabidopsis lyrata HOM05D003823 ORTHO05D004866 5.5e-96 354.4 187 88.2
THA.LOC104821437 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 5.5e-96 354.4 187 87.7
AT3G47810 Arabidopsis thaliana HOM05D003823 ORTHO05D004866 7.2e-96 354.0 186 88.7
Mapoly0081s0078 Marchantia polymorpha HOM05D003823 ORTHO05D004866 7.2e-96 354.0 182 89.0
Oeu006179.1 Olea europaea HOM05D003823 ORTHO05D004866 7.9e-95 350.5 186 88.2
Lj5A113G71 Lonicera japonica HOM05D003823 ORTHO05D004866 1.0e-94 350.1 184 89.1
Carub.0005s1392 Capsella rubella HOM05D003823 ORTHO05D004866 6.7e-94 347.4 181 89.5
Pp3c11_12990 Physcomitrium patens HOM05D003823 ORTHO05D004866 8.8e-94 347.1 182 89.6
SMO116G0153 Selaginella moellendorffii HOM05D003823 ORTHO05D004866 4.4e-93 344.7 182 87.9
Haze_07352 Corylus avellana HOM05D003823 ORTHO05D004866 4.8e-92 341.3 251 69.3
CSS0031561 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 6.9e-91 337.4 187 88.2
CBR_g29439 Chara braunii HOM05D003823 ORTHO05D004866 7.7e-90 334.0 183 82.5
Pp3c7_13070 Physcomitrium patens HOM05D003823 ORTHO05D004866 8.5e-89 330.5 182 85.7
SGA_v2.0_scaffold193G40709 Striga asiatica HOM05D003823 ORTHO05D004866 7.9e-87 323.9 191 81.2
GSVIVG01008037001 Vitis vinifera HOM05D003823 ORTHO05D004866 3.9e-86 321.6 161 93.2
CSS0019545 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 2.6e-82 308.9 185 80.5
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 5.9e-82 307.8 152 92.8
MBI05_g00394_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D000195 1.3e-76 290.0 143 93.0
QL93p0043_0002 Quercus lobata HOM05D003823 ORTHO05D004866 5.3e-75 284.6 141 94.3
SEGI_34945 Sequoiadendron giganteum HOM05D003823 ORTHO05D004866 2.9e-73 278.9 142 90.1
Nitab4.5_0012727g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 2.5e-72 275.8 142 89.4
TAR729G0007 Trochodendron aralioides HOM05D003823 ORTHO05D004866 2.1e-71 272.7 166 83.7
Actinidia17538 Actinidia chinensis HOM05D003823 ORTHO05D004866 4.0e-70 268.5 130 93.8
Manes.01G188500 Manihot esculenta HOM05D003823 ORTHO05D004866 5.4e-67 258.1 128 89.1
CSS0004961 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 7.0e-67 257.7 187 71.1
Lj4A511G17 Lonicera japonica HOM05D003823 ORTHO05D004866 2.3e-65 252.7 185 71.9
Eucgr.G00164 Eucalyptus grandis HOM05D003823 ORTHO05D004866 6.5e-65 251.1 136 85.3
Eucgr.G00114 Eucalyptus grandis HOM05D003823 ORTHO05D004866 4.2e-64 248.4 148 81.1
MCO13G641 Micromonas commoda HOM05D003823 ORTHO05D004866 2.4e-59 232.6 188 55.3
Cre12.g499900 Chlamydomonas reinhardtii HOM05D003823 ORTHO05D004866 3.8e-57 225.3 187 56.1
Lj4A501G12 Lonicera japonica HOM05D003823 ORTHO05D004866 2.0e-53 213.0 166 67.5
Atru.chr9.2289 Acer truncatum HOM05D003823 ORTHO05D004866 1.0e-49 200.7 157 67.5
Gorai.007G237600 Gossypium raimondii HOM05D003823 ORTHO05D004866 3.4e-45 185.7 90 91.1
Gohir.D02G085100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.2e-44 183.0 115 74.8
CSS0033378 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.6e-42 176.8 90 88.9
Gohir.D06G139701 Gossypium hirsutum HOM05D003823 ORTHO05D017994 6.0e-42 174.9 87 88.5
Gohir.A08G078101 Gossypium hirsutum HOM05D003823 ORTHO05D004866 7.8e-42 174.5 103 77.7
Gorai.005G191600 Gossypium raimondii HOM05D003823 ORTHO05D004866 2.3e-41 172.9 87 87.4
Gorai.003G098000 Gossypium raimondii HOM05D003823 ORTHO05D017994 3.9e-41 172.2 87 87.4
Gorai.008G100600 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.5e-40 170.2 87 87.4
Gohir.A05G198301 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.5e-40 169.5 87 86.2
Gohir.D03G122233 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.5e-40 169.5 87 86.2
CSS0038842 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 3.1e-38 162.5 157 55.4
Gohir.D06G082500 Gossypium hirsutum HOM05D003823 ORTHO05D017994 5.8e-37 158.3 87 83.9
Lj4g0026130 Lotus japonicus HOM05D003823 ORTHO05D004866 1.1e-35 154.1 97 79.4
Thecc.02G319100 Theobroma cacao HOM05D003823 ORTHO05D004866 1.9e-35 153.3 139 59.7
Gorai.013G138400 Gossypium raimondii HOM05D003823 ORTHO05D004866 2.1e-34 149.8 79 84.8
unitig_0.g782 Utricularia gibba HOM05D003823 ORTHO05D004866 1.2e-31 140.6 69 82.6
Sabra15G0049800 Salix brachista HOM05D003823 ORTHO05D000412 8.1e-31 137.9 70 95.7
Gohir.A01G072501 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.2e-26 124.0 62 83.9
Gohir.A05G203200 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.2e-26 124.0 62 83.9
Gohir.A10G203700 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.2e-26 124.0 62 83.9
Gohir.A12G000600 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.2e-26 124.0 62 83.9
Gohir.D06G205050 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.2e-26 124.0 62 83.9
Gohir.D08G111400 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.2e-26 124.0 62 83.9
Gorai.005G095900 Gossypium raimondii HOM05D003823 ORTHO05D218813 5.6e-16 88.6 44 93.2
Sabra15G0057900 Salix brachista HOM05D003823 ORTHO05D349330 1.1e-14 84.3 47 91.5
Duzib248G1489 Durio zibethinus HOM05D003823 ORTHO05D186086 2.9e-12 76.3 44 81.8


User provided reference genes

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