Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0959 Trochodendron aralioides HOM05D001377 ORTHO05D001221 2.7e-68 261.9 139 100.0
TAR629G0360 Trochodendron aralioides HOM05D001377 ORTHO05D001221 4.3e-29 131.7 158 57.0
TAR371G0717 Trochodendron aralioides HOM05D001377 ORTHO05D001221 9.5e-29 130.6 160 58.1
Nn4g23682 Nelumbo nucifera HOM05D001377 ORTHO05D001221 1.3e-17 93.6 157 49.7
Cfa007959 Carpinus fangiana HOM05D001377 ORTHO05D001221 1.1e-16 90.5 151 48.3
QL01p000940 Quercus lobata HOM05D001377 ORTHO05D001221 1.4e-16 90.1 154 46.1
CiPaw.15G002200 Carya illinoinensis HOM05D001377 ORTHO05D001221 3.2e-16 89.0 147 46.9
GSVIVG01011972001 Vitis vinifera HOM05D001377 ORTHO05D001221 3.2e-16 89.0 152 46.7
Haze_14110 Corylus avellana HOM05D001377 ORTHO05D001221 7.1e-16 87.8 158 43.7
Haze_14112 Corylus avellana HOM05D001377 ORTHO05D001221 7.1e-16 87.8 158 43.7
QL01p000944 Quercus lobata HOM05D001377 ORTHO05D001221 7.1e-16 87.8 151 46.4
Dinv16523 Davidia involucrata HOM05D001377 ORTHO05D001221 1.6e-15 86.7 154 46.8
Dinv05807 Davidia involucrata HOM05D001377 ORTHO05D001221 2.1e-15 86.3 162 44.4
QL01p000954 Quercus lobata HOM05D001377 ORTHO05D001221 2.1e-15 86.3 151 45.7
FAN09G4253 Fragaria x ananassa HOM05D001377 ORTHO05D001221 3.5e-15 85.5 149 45.0
PSO017G3961 Papaver somniferum HOM05D001377 ORTHO05D001221 3.5e-15 85.5 151 43.0
RcHm_v2.0_Chr2g0163401 Rosa chinensis HOM05D001377 ORTHO05D001221 1.3e-14 83.6 149 45.0
Haze_17417 Corylus avellana HOM05D001377 ORTHO05D001221 3.0e-14 82.4 148 45.9
Cfa018650 Carpinus fangiana HOM05D001377 ORTHO05D001221 3.9e-14 82.0 148 45.3
Hma1.2p1_0136F.1_g062050 Hydrangea macrophylla HOM05D001377 ORTHO05D001221 5.1e-14 81.6 145 51.0
PSO478G2613 Papaver somniferum HOM05D001377 ORTHO05D001221 5.1e-14 81.6 153 41.2
FAN02G0241 Fragaria x ananassa HOM05D001377 ORTHO05D001221 6.6e-14 81.3 149 43.6
CiPaw.04G003600 Carya illinoinensis HOM05D001377 ORTHO05D001221 1.9e-13 79.7 148 43.9
FAN14G3399 Fragaria x ananassa HOM05D001377 ORTHO05D001221 2.5e-13 79.3 150 42.7
Potri.008G114800 Populus trichocarpa HOM05D001377 ORTHO05D001221 3.3e-13 79.0 148 49.3
Prupe.3G240800 Prunus persica HOM05D001377 ORTHO05D001221 7.3e-13 77.8 145 44.8
Ciclev10013467m.g Citrus clementina HOM05D001377 ORTHO05D001221 2.8e-12 75.9 151 44.4
QL02p053039 Quercus lobata HOM05D001377 ORTHO05D001221 6.2e-12 74.7 144 45.1
Aqoxy3G00643 Aquilegia oxysepala HOM05D001377 ORTHO05D001221 8.1e-12 74.3 156 43.6
Atru.chr8.798 Acer truncatum HOM05D001377 ORTHO05D001221 4.0e-11 72.0 149 44.3
Actinidia17619 Actinidia chinensis HOM05D001377 ORTHO05D001221 5.3e-11 71.6 147 45.6
Cc11_g10760 Coffea canephora HOM05D001377 ORTHO05D001221 5.3e-11 71.6 151 36.4
Thecc.02G363000 Theobroma cacao HOM05D001377 ORTHO05D001221 5.3e-11 71.6 144 42.4
PGR042G1271 Punica granatum HOM05D001377 ORTHO05D001221 6.9e-11 71.2 135 46.7
MD16G1049800 Malus domestica HOM05D001377 ORTHO05D001221 1.2e-10 70.5 147 40.1
CiPaw.03G005400 Carya illinoinensis HOM05D001377 ORTHO05D001221 2.0e-10 69.7 150 42.0
Ciclev10030538m.g Citrus clementina HOM05D001377 ORTHO05D001221 4.4e-10 68.6 149 40.3
MD09G1082900 Malus domestica HOM05D001377 ORTHO05D001221 4.4e-10 68.6 146 44.5
GSVIVG01031076001 Vitis vinifera HOM05D001377 ORTHO05D001221 9.9e-10 67.4 112 47.3
MD13G1048500 Malus domestica HOM05D001377 ORTHO05D001221 1.3e-09 67.0 147 34.0
ClCG11G005290 Citrullus lanatus HOM05D001377 ORTHO05D001221 1.7e-09 66.6 122 41.8
Duzib251G0529 Durio zibethinus HOM05D001377 ORTHO05D001221 1.7e-09 66.6 145 40.7
Eucgr.J01462 Eucalyptus grandis HOM05D001377 ORTHO05D001221 1.7e-09 66.6 147 42.9
CSS0046282 Camellia sinensis var. sinensis HOM05D001377 ORTHO05D001221 2.2e-09 66.2 159 40.3
vmacro18103 Vaccinium macrocarpon HOM05D001377 ORTHO05D001221 2.2e-09 66.2 132 41.7
Cpa.g.sc1.235 Carica papaya HOM05D001377 ORTHO05D001221 3.8e-09 65.5 147 42.2
CANSAT64G1104 Cannabis sativa HOM05D001377 ORTHO05D001221 4.9e-09 65.1 147 42.9
Gorai.008G187500 Gossypium raimondii HOM05D001377 ORTHO05D001221 6.4e-09 64.7 97 44.3
CANSAT11G1821 Cannabis sativa HOM05D001377 ORTHO05D001221 8.4e-09 64.3 132 39.4
Sed0011516 Sechium edule HOM05D001377 ORTHO05D001221 1.1e-08 63.9 135 40.0
TWI79G1631 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 1.4e-08 63.5 151 45.0
MSTRG.23825 Avicennia marina HOM05D001377 ORTHO05D001221 1.9e-08 63.2 83 49.4
Actinidia26292 Actinidia chinensis HOM05D001377 ORTHO05D001221 3.2e-08 62.4 147 40.1
Gohir.A12G172400 Gossypium hirsutum HOM05D001377 ORTHO05D001221 9.3e-08 60.8 97 43.3
Glyma.18G280500 Glycine max HOM05D001377 ORTHO05D001221 1.2e-07 60.5 145 40.0
Cpa.g.sc179.33 Carica papaya HOM05D001377 ORTHO05D001221 2.1e-07 59.7 151 38.4
Glyma.08G256300 Glycine max HOM05D001377 ORTHO05D001221 2.1e-07 59.7 150 41.3
MSTRG.2942 Avicennia marina HOM05D001377 ORTHO05D001221 2.7e-07 59.3 79 51.9
Manes.01G107600 Manihot esculenta HOM05D001377 ORTHO05D001221 2.7e-07 59.3 54 66.7
Actinidia14837 Actinidia chinensis HOM05D001377 ORTHO05D001221 3.5e-07 58.9 164 36.0
Lj7A9G80 Lonicera japonica HOM05D001377 ORTHO05D001221 3.5e-07 58.9 125 42.4
Rhsim08G0079900 Rhododendron simsii HOM05D001377 ORTHO05D001221 3.5e-07 58.9 130 41.5
Gohir.A11G161100 Gossypium hirsutum HOM05D001377 ORTHO05D001221 6.0e-07 58.2 87 48.3
Ca_26150_v3 Cicer arietinum L. HOM05D001377 ORTHO05D001221 1.0e-06 57.4 148 39.2
Gohir.D11G167400 Gossypium hirsutum HOM05D001377 ORTHO05D001221 1.3e-06 57.0 146 39.0
Phvul.008G020600 Phaseolus vulgaris HOM05D001377 ORTHO05D001221 1.3e-06 57.0 146 38.4
VMungo1383G0213 Vigna mungo HOM05D001377 ORTHO05D001221 1.3e-06 57.0 150 38.0
Dinv34859 Davidia involucrata HOM05D001377 ORTHO05D001221 2.3e-06 56.2 148 38.5
Gohir.D12G174900 Gossypium hirsutum HOM05D001377 ORTHO05D001221 2.3e-06 56.2 99 41.4
COL.COLO4_09721 Corchorus olitorius HOM05D001377 ORTHO05D001221 3.0e-06 55.8 138 39.1
COL.COLO4_16205 Corchorus olitorius HOM05D001377 ORTHO05D001221 3.0e-06 55.8 145 37.2
Lalb_Chr17g0336541 Lupinus albus HOM05D001377 ORTHO05D001221 3.0e-06 55.8 127 40.2
Thecc.04G140200 Theobroma cacao HOM05D001377 ORTHO05D001221 3.0e-06 55.8 141 37.6
DCAR_010974 Daucus carota HOM05D001377 ORTHO05D001221 3.9e-06 55.5 152 40.1
Hma1.2p1_0605F.1_g187860 Hydrangea macrophylla HOM05D001377 ORTHO05D001221 5.1e-06 55.1 153 37.9
Nn3g17678 Nelumbo nucifera HOM05D001377 ORTHO05D001221 5.1e-06 55.1 153 37.9
Potri.017G111400 Populus trichocarpa HOM05D001377 ORTHO05D001221 5.1e-06 55.1 140 40.7
Sabra08G0087000 Salix brachista HOM05D001377 ORTHO05D001221 8.7e-06 54.3 132 36.4


User provided reference genes

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