Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0913 Trochodendron aralioides HOM05D007034 ORTHO05D008665 1.4e-248 862.4 427 100.0
TAR374G0491 Trochodendron aralioides HOM05D007034 ORTHO05D008665 1.1e-208 729.9 433 86.8
Nn3g16191 Nelumbo nucifera HOM05D007034 ORTHO05D008665 7.4e-72 275.4 433 42.7
MBI11_g45190_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 4.1e-54 216.5 438 37.4
Aqoxy5G02954 Aquilegia oxysepala HOM05D007034 ORTHO05D008665 8.8e-49 198.7 260 45.4
Potri.012G111800 Populus trichocarpa HOM05D007034 ORTHO05D008665 4.4e-40 169.9 409 34.2
Ciclev10030559m.g Citrus clementina HOM05D007034 ORTHO05D008665 1.5e-37 161.4 267 39.0
Gohir.A07G045600 Gossypium hirsutum HOM05D007034 ORTHO05D008665 2.0e-37 161.0 281 36.7
Duzib205G0091 Durio zibethinus HOM05D007034 ORTHO05D008665 3.5e-37 160.2 265 38.9
Gorai.001G053100 Gossypium raimondii HOM05D007034 ORTHO05D008665 4.5e-37 159.8 281 36.7
TWI23G0512 Tripterygium wilfordii HOM05D007034 ORTHO05D008665 1.3e-36 158.3 427 30.9
Gohir.D07G050000 Gossypium hirsutum HOM05D007034 ORTHO05D008665 2.2e-36 157.5 281 35.9
Thecc.03G143600 Theobroma cacao HOM05D007034 ORTHO05D008665 8.5e-36 155.6 407 31.9
GSVIVG01014061001 Vitis vinifera HOM05D007034 ORTHO05D008665 1.1e-35 155.2 339 34.5
Lj5C84G9 Lonicera japonica HOM05D007034 ORTHO05D008665 2.1e-34 151.0 399 30.8
Manes.06G128800 Manihot esculenta HOM05D007034 ORTHO05D008665 2.1e-34 151.0 265 38.9
COL.COLO4_37288 Corchorus olitorius HOM05D007034 ORTHO05D008665 3.6e-34 150.2 261 36.8
ATR0582G190 Amborella trichopoda HOM05D007034 ORTHO05D008665 1.8e-33 147.9 178 44.9
MD06G1128300 Malus domestica HOM05D007034 ORTHO05D008665 2.3e-33 147.5 384 29.7
Actinidia18277 Actinidia chinensis HOM05D007034 ORTHO05D008665 1.5e-32 144.8 397 32.0
Haze_19381 Corylus avellana HOM05D007034 ORTHO05D008665 8.2e-31 139.0 276 38.0
Prupe.5G138100 Prunus persica HOM05D007034 ORTHO05D008665 4.1e-30 136.7 397 29.7
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 7.0e-30 136.0 314 31.2
MBI11_g13135_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 1.6e-29 134.8 189 45.0
THA.LOC104818293 Tarenaya hassleriana HOM05D007034 ORTHO05D008665 2.0e-29 134.4 273 33.0
arahy.Tifrunner.gnm1.ann1.FYEN8G Arachis hypogaea HOM05D007034 ORTHO05D008665 2.6e-29 134.0 264 38.3
RcHm_v2.0_Chr7g0188231 Rosa chinensis HOM05D007034 ORTHO05D008665 2.6e-29 134.0 341 31.4
Carub.0006s0637 Capsella rubella HOM05D007034 ORTHO05D008665 5.9e-29 132.9 264 34.1
arahy.Tifrunner.gnm1.ann1.XWK03B Arachis hypogaea HOM05D007034 ORTHO05D008665 1.3e-28 131.7 264 37.9
Rhsim08G0200400 Rhododendron simsii HOM05D007034 ORTHO05D008665 2.9e-28 130.6 382 29.1
Cc04_g05570 Coffea canephora HOM05D007034 ORTHO05D008665 3.8e-28 130.2 247 34.4
PGR042G1727 Punica granatum HOM05D007034 ORTHO05D008665 3.8e-28 130.2 250 35.2
Oeu012864.4 Olea europaea HOM05D007034 ORTHO05D008665 6.5e-28 129.4 302 32.5
Sabra12G0081400 Salix brachista HOM05D007034 ORTHO05D008665 6.5e-28 129.4 326 32.8
FAN08G2641 Fragaria x ananassa HOM05D007034 ORTHO05D008665 7.2e-27 125.9 384 30.2
SGA_v2.0_scaffold37G14662 Striga asiatica HOM05D007034 ORTHO05D008665 3.6e-26 123.6 253 34.4
Lsat_1_v5_gn_5_9280 Lactuca sativa HOM05D007034 ORTHO05D008665 4.7e-26 123.2 368 28.8
PGSC0003DMG400014226 Solanum tuberosum HOM05D007034 ORTHO05D008665 4.7e-26 123.2 358 28.2
Migut.I00651 Erythranthe guttata HOM05D007034 ORTHO05D008665 6.1e-26 122.9 254 34.6
BcaB05g21618 Brassica carinata HOM05D007034 ORTHO05D008665 1.0e-25 122.1 251 33.9
Phvul.002G279600 Phaseolus vulgaris HOM05D007034 ORTHO05D008665 1.0e-25 122.1 283 33.2
PSO017G4759 Papaver somniferum HOM05D007034 ORTHO05D008665 1.8e-25 121.3 271 36.9
Sp6g35470 Schrenkiella parvula HOM05D007034 ORTHO05D008665 1.8e-25 121.3 258 33.3
SalBow7G3686 Salvia bowleyana HOM05D007034 ORTHO05D008665 6.8e-25 119.4 261 34.1
Lj4g0024388 Lotus japonicus HOM05D007034 ORTHO05D008665 8.8e-25 119.0 254 35.8
BcaB05g21619 Brassica carinata HOM05D007034 ORTHO05D008665 1.2e-24 118.6 254 34.3
CAN.G1008.36 Capsicum annuum HOM05D007034 ORTHO05D008665 1.5e-24 118.2 270 30.7
Solyc03g117960.4 Solanum lycopersicum HOM05D007034 ORTHO05D008665 1.5e-24 118.2 327 29.1
PSO017G2510 Papaver somniferum HOM05D007034 ORTHO05D008665 2.0e-24 117.9 353 29.2
BraA02t04915Z Brassica rapa HOM05D007034 ORTHO05D008665 2.6e-24 117.5 243 32.9
C02p03100 Brassica napus HOM05D007034 ORTHO05D008665 3.4e-24 117.1 248 35.5
DCAR_025620 Daucus carota HOM05D007034 ORTHO05D008665 3.4e-24 117.1 361 31.3
Medtr8g095490 Medicago truncatula HOM05D007034 ORTHO05D008665 7.5e-24 115.9 245 33.9
BcaC03g13189 Brassica carinata HOM05D007034 ORTHO05D008665 9.8e-24 115.5 247 34.8
BolC2t06271H Brassica oleracea HOM05D007034 ORTHO05D008665 9.8e-24 115.5 247 34.8
EL10Ac7g17117 Beta vulgaris HOM05D007034 ORTHO05D008665 1.3e-23 115.2 298 32.6
Ah.15g089920 Amaranthus hybridus HOM05D007034 ORTHO05D008665 1.7e-23 114.8 322 30.4
AL6G17700 Arabidopsis lyrata HOM05D007034 ORTHO05D008665 1.7e-23 114.8 271 31.7
AT5G07400 Arabidopsis thaliana HOM05D007034 ORTHO05D008665 2.2e-23 114.4 268 32.8
Lalb_Chr07g0183941 Lupinus albus HOM05D007034 ORTHO05D008665 6.3e-23 112.8 326 31.3
CANSAT56G2345 Cannabis sativa HOM05D007034 ORTHO05D008665 8.3e-23 112.5 239 31.0
Eucgr.G00023 Eucalyptus grandis HOM05D007034 ORTHO05D008665 1.8e-22 111.3 304 29.6
Cpa.g.sc13.203 Carica papaya HOM05D007034 ORTHO05D008665 3.1e-22 110.5 166 39.8
VMungo0251G1097 Vigna mungo HOM05D007034 ORTHO05D008665 5.4e-22 109.8 247 34.0
HanXRQChr05g0154511 Helianthus annuus HOM05D007034 ORTHO05D008665 7.0e-22 109.4 250 30.4
Glyma.08G005800 Glycine max HOM05D007034 ORTHO05D008665 9.1e-22 109.0 266 32.7
Ca_16833_v3 Cicer arietinum L. HOM05D007034 ORTHO05D008665 2.0e-21 107.8 228 34.6
Thhalv10012509m.g Eutrema salsugineum HOM05D007034 ORTHO05D008665 4.5e-21 106.7 255 34.5
Psat7g040600 Pisum sativum HOM05D007034 ORTHO05D008665 4.5e-21 106.7 329 30.1
Dinv13693 Davidia involucrata HOM05D007034 ORTHO05D008665 1.7e-20 104.8 295 29.5
HPP92_006434 Vanilla planifolia HOM05D007034 ORTHO05D008665 5.5e-19 99.8 258 30.6
QL10p035731 Quercus lobata HOM05D007034 ORTHO05D008665 3.0e-17 94.0 307 29.6
TPR.G12786 Trifolium pratense HOM05D007034 ORTHO05D008665 1.2e-16 92.0 219 34.7
CSS0014219 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 7.0e-14 82.8 259 30.1
ECA246G4515 Erigeron canadensis HOM05D007034 ORTHO05D008665 2.7e-13 80.9 250 26.0
Atru.chr6.1955 Acer truncatum HOM05D007034 ORTHO05D008665 6.6e-12 76.3 79 45.6
FAN04G0206 Fragaria x ananassa HOM05D007034 ORTHO05D008665 4.7e-10 70.1 270 27.4
AagrBONN_evm.TU.Sc2ySwM_340.151 Anthoceros agrestis HOM05D007034 ORTHO05D008665 8.3e-07 59.3 123 32.5
AUR62029782 Chenopodium quinoa HOM05D007034 ORTHO05D008665 1.1e-06 58.9 250 27.6
CBR_g36305 Chara braunii HOM05D007034 ORTHO05D008665 4.1e-06 57.0 123 29.3


User provided reference genes

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