Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0331 Trochodendron aralioides HOM05D000439 ORTHO05D006154 1.5e-50 202.6 106 100.0
TAR374G1365 Trochodendron aralioides HOM05D000439 ORTHO05D006154 4.5e-39 164.5 105 79.0
GSVIVG01014063001 Vitis vinifera HOM05D000439 ORTHO05D006154 1.0e-35 153.3 105 72.4
Nn3g16172 Nelumbo nucifera HOM05D000439 ORTHO05D006154 1.2e-34 149.8 107 71.0
Dinv23249 Davidia involucrata HOM05D000439 ORTHO05D006154 1.5e-29 132.9 107 66.4
Aqoxy5G03342 Aquilegia oxysepala HOM05D000439 ORTHO05D006154 2.8e-28 128.6 105 62.9
Cpa.g.sc13.206 Carica papaya HOM05D000439 ORTHO05D006154 3.6e-28 128.3 109 63.3
Actinidia36853 Actinidia chinensis HOM05D000439 ORTHO05D006154 4.0e-27 124.8 107 58.9
ClCG04G003180 Citrullus lanatus HOM05D000439 ORTHO05D006154 2.6e-26 122.1 113 59.3
Dinv13691 Davidia involucrata HOM05D000439 ORTHO05D006154 2.6e-26 122.1 107 59.8
Actinidia08922 Actinidia chinensis HOM05D000439 ORTHO05D006154 5.8e-26 120.9 107 57.9
CSS0035359 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D006154 1.3e-25 119.8 107 57.9
Nitab4.5_0002540g0130 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.3e-25 119.8 105 59.0
Phvul.009G159400 Phaseolus vulgaris HOM05D000439 ORTHO05D006154 1.3e-25 119.8 109 57.8
CAN.G47.4 Capsicum annuum HOM05D000439 ORTHO05D006154 1.7e-25 119.4 105 58.1
Nitab4.5_0004781g0040 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.7e-25 119.4 105 60.0
QL10p000140 Quercus lobata HOM05D000439 ORTHO05D006154 2.2e-25 119.0 105 60.0
Eucgr.H00244 Eucalyptus grandis HOM05D000439 ORTHO05D006154 2.9e-25 118.6 110 60.0
VMungo1309G2046 Vigna mungo HOM05D000439 ORTHO05D006154 2.9e-25 118.6 109 56.0
Psat5g056000 Pisum sativum HOM05D000439 ORTHO05D006154 3.7e-25 118.2 109 55.0
arahy.Tifrunner.gnm1.ann1.94UTWG Arachis hypogaea HOM05D000439 ORTHO05D006154 1.4e-24 116.3 110 55.5
TWI23G1133 Tripterygium wilfordii HOM05D000439 ORTHO05D006154 1.4e-24 116.3 104 61.5
Manes.06G128900 Manihot esculenta HOM05D000439 ORTHO05D006154 3.2e-24 115.2 107 57.0
arahy.Tifrunner.gnm1.ann1.R8UNTY Arachis hypogaea HOM05D000439 ORTHO05D006154 4.1e-24 114.8 108 55.6
PGSC0003DMG400014443 Solanum tuberosum HOM05D000439 ORTHO05D006154 4.1e-24 114.8 105 55.2
Sopen12g021430 Solanum pennellii HOM05D000439 ORTHO05D006154 9.2e-24 113.6 105 54.3
Migut.I00648 Erythranthe guttata HOM05D000439 ORTHO05D006154 1.2e-23 113.2 116 52.6
Manes.14G042300 Manihot esculenta HOM05D000439 ORTHO05D006154 2.0e-23 112.5 105 55.2
Solyc12g042440.2 Solanum lycopersicum HOM05D000439 ORTHO05D006154 2.0e-23 112.5 105 53.3
Sopen03g036820 Solanum pennellii HOM05D000439 ORTHO05D006154 2.7e-23 112.1 107 55.1
Rhsim12G0182700 Rhododendron simsii HOM05D000439 ORTHO05D006154 4.6e-23 111.3 107 54.2
Lj1g0000423 Lotus japonicus HOM05D000439 ORTHO05D006154 6.0e-23 110.9 110 53.6
TWI14G1070 Tripterygium wilfordii HOM05D000439 ORTHO05D006154 6.0e-23 110.9 105 58.1
MELO3C003262.2 Cucumis melo HOM05D000439 ORTHO05D006154 7.8e-23 110.5 113 54.0
CsaV3_4G029810 Cucumis sativus L. HOM05D000439 ORTHO05D006154 7.8e-23 110.5 113 54.0
Glyma.06G162100 Glycine max HOM05D000439 ORTHO05D006154 7.8e-23 110.5 109 52.3
Peaxi162Scf00091g00412 Petunia axillaris HOM05D000439 ORTHO05D006154 1.0e-22 110.2 109 55.0
MBI07_g11053_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D006154 1.3e-22 109.8 105 51.4
Nitab4.5_0000976g0310 Nicotiana tabacum HOM05D000439 ORTHO05D006154 3.0e-22 108.6 106 56.6
Potri.015G110066 Populus trichocarpa HOM05D000439 ORTHO05D006154 3.9e-22 108.2 105 53.3
Solyc03g117910.3 Solanum lycopersicum HOM05D000439 ORTHO05D006154 3.9e-22 108.2 107 53.3
COL.COLO4_37292 Corchorus olitorius HOM05D000439 ORTHO05D006154 5.0e-22 107.8 111 53.2
Thecc.03G143900 Theobroma cacao HOM05D000439 ORTHO05D006154 6.6e-22 107.5 112 51.8
Ca_17046_v3 Cicer arietinum L. HOM05D000422 ORTHO05D001248 8.6e-22 107.1 109 51.4
Duzib205G0088 Durio zibethinus HOM05D000439 ORTHO05D006154 8.6e-22 107.1 111 54.1
Glyma.04G203400 Glycine max HOM05D000439 ORTHO05D006154 8.6e-22 107.1 109 50.5
Rhsim08G0200600 Rhododendron simsii HOM05D000439 ORTHO05D006154 1.1e-21 106.7 107 52.3
Lj9P489T62 Lonicera japonica HOM05D000439 ORTHO05D006154 2.5e-21 105.5 106 52.8
Ciclev10033769m.g Citrus clementina HOM05D000439 ORTHO05D006154 4.3e-21 104.8 109 52.3
Cc04_g05540 Coffea canephora HOM05D000439 ORTHO05D006154 7.3e-21 104.0 106 52.8
Gohir.A03G055200 Gossypium hirsutum HOM05D000439 ORTHO05D006154 9.5e-21 103.6 112 52.7
Gohir.D03G111600 Gossypium hirsutum HOM05D000439 ORTHO05D006154 9.5e-21 103.6 112 52.7
Gorai.003G118000 Gossypium raimondii HOM05D000439 ORTHO05D006154 9.5e-21 103.6 112 52.7
Duzib084G0576 Durio zibethinus HOM05D000439 ORTHO05D006154 1.2e-20 103.2 111 53.2
Gorai.001G052900 Gossypium raimondii HOM05D000439 ORTHO05D006154 1.2e-20 103.2 106 54.7
Lalb_Chr11g0068951 Lupinus albus HOM05D000439 ORTHO05D006154 1.2e-20 103.2 107 51.4
Peaxi162Scf00314g00840 Petunia axillaris HOM05D000439 ORTHO05D006154 1.2e-20 103.2 104 54.8
TPR.G7812 Trifolium pratense HOM05D000439 ORTHO05D006154 1.2e-20 103.2 108 49.1
AL8G25340 Arabidopsis lyrata HOM05D000439 ORTHO05D006154 1.6e-20 102.8 108 51.9
Gohir.A07G045400 Gossypium hirsutum HOM05D000439 ORTHO05D006154 4.7e-20 101.3 106 53.8
Carub.0008s1113 Capsella rubella HOM05D000439 ORTHO05D006154 6.2e-20 100.9 104 54.8
Nitab4.5_0001000g0070 Nicotiana tabacum HOM05D000439 ORTHO05D006154 8.1e-20 100.5 104 52.9
Peaxi162Scf00091g00516 Petunia axillaris HOM05D000439 ORTHO05D006154 1.1e-19 100.1 113 51.3
Medtr3g098290 Medicago truncatula HOM05D000439 ORTHO05D006154 1.4e-19 99.8 106 54.7
Peaxi162Scf00091g00051 Petunia axillaris HOM05D000439 ORTHO05D006154 1.4e-19 99.8 112 49.1
THA.LOC104808041 Tarenaya hassleriana HOM05D000439 ORTHO05D006154 1.8e-19 99.4 112 51.8
CDE02G0348 Ceratophyllum demersum HOM05D000439 ORTHO05D006154 2.3e-19 99.0 99 47.5
AT4G00650 Arabidopsis thaliana HOM05D000439 ORTHO05D006154 3.1e-19 98.6 103 53.4
Aa31LG3G7580 Aethionema arabicum HOM05D000439 ORTHO05D006154 5.2e-19 97.8 112 50.0
Sed0010080 Sechium edule HOM05D000439 ORTHO05D006154 6.8e-19 97.4 114 50.9
Lalb_Chr23g0272801 Lupinus albus HOM05D000439 ORTHO05D006154 8.9e-19 97.1 74 60.8
Solyc03g117930.4 Solanum lycopersicum HOM05D000439 ORTHO05D006154 8.9e-19 97.1 109 48.6
Nitab4.5_0000433g0080 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.2e-18 96.7 104 51.0
Oeu051173.1 Olea europaea HOM05D000439 ORTHO05D006154 1.2e-18 96.7 114 49.1
DCAR_025619 Daucus carota HOM05D000439 ORTHO05D006154 1.5e-18 96.3 107 50.5
Thhalv10012996m.g Eutrema salsugineum HOM05D000439 ORTHO05D006154 1.5e-18 96.3 107 53.3
ECA246G4312 Erigeron canadensis HOM05D007610 ORTHO05D009592 2.6e-18 95.5 107 51.4
BcaC01g06107 Brassica carinata HOM05D000439 ORTHO05D006154 3.4e-18 95.1 107 51.4
BcaC04g20734 Brassica carinata HOM05D000439 ORTHO05D006154 3.4e-18 95.1 105 50.5
C09p39760 Brassica napus HOM05D000439 ORTHO05D006154 3.4e-18 95.1 105 50.5
BolC9t56878H Brassica oleracea HOM05D000439 ORTHO05D006154 3.4e-18 95.1 105 50.5
SGA_v2.0_scaffold5G02819 Striga asiatica HOM05D000439 ORTHO05D006154 4.4e-18 94.7 101 51.5
Nitab4.5_0012621g0010 Nicotiana tabacum HOM05D000439 ORTHO05D006154 5.8e-18 94.4 105 49.5
BcaB08g35465 Brassica carinata HOM05D000439 ORTHO05D006154 7.5e-18 94.0 110 48.2
Sopen03g036830 Solanum pennellii HOM05D000439 ORTHO05D006154 7.5e-18 94.0 109 46.8
CAN.G1008.33 Capsicum annuum HOM05D000439 ORTHO05D006154 9.8e-18 93.6 109 48.6
BraSC35t45999Z Brassica rapa HOM05D000439 ORTHO05D006154 1.7e-17 92.8 102 49.0
Nitab4.5_0000433g0090 Nicotiana tabacum HOM05D000439 ORTHO05D006154 2.2e-17 92.4 104 48.1
Nitab4.5_0007669g0030 Nicotiana tabacum HOM05D000439 ORTHO05D006154 2.2e-17 92.4 82 59.8
Sp6g13280 Schrenkiella parvula HOM05D000439 ORTHO05D006154 2.2e-17 92.4 108 50.0
CAN.G1008.30 Capsicum annuum HOM05D000439 ORTHO05D006154 2.9e-17 92.0 101 50.5
PGSC0003DMG400031150 Solanum tuberosum HOM05D000439 ORTHO05D006154 2.9e-17 92.0 113 46.0
Nitab4.5_0000976g0300 Nicotiana tabacum HOM05D000439 ORTHO05D006154 4.9e-17 91.3 82 58.5
Sopen06g030920 Solanum pennellii HOM05D000439 ORTHO05D006154 4.9e-17 91.3 106 51.9
BcaC01g06069 Brassica carinata HOM05D000439 ORTHO05D006154 6.4e-17 90.9 104 50.0
ECA246G1416 Erigeron canadensis HOM05D000439 ORTHO05D006154 6.4e-17 90.9 107 48.6
Atru.chr6.1963 Acer truncatum HOM05D000439 ORTHO05D006154 1.1e-16 90.1 84 51.2
Solyc06g074450.3 Solanum lycopersicum HOM05D000439 ORTHO05D006154 1.1e-16 90.1 106 50.9
Sopen04g028360 Solanum pennellii HOM05D000439 ORTHO05D006154 1.4e-16 89.7 107 46.7
PGSC0003DMG400031151 Solanum tuberosum HOM05D000439 ORTHO05D006154 1.4e-16 89.7 107 45.8
A10p08000 Brassica napus HOM05D000439 ORTHO05D006154 1.9e-16 89.4 103 48.5
C03p19250 Brassica napus HOM05D000439 ORTHO05D006154 2.4e-16 89.0 104 49.0
BolC3t14311H Brassica oleracea HOM05D000439 ORTHO05D006154 2.4e-16 89.0 104 49.0
ECA246G3042 Erigeron canadensis HOM05D000439 ORTHO05D006154 2.4e-16 89.0 107 48.6
Nitab4.5_0001000g0080 Nicotiana tabacum HOM05D000439 ORTHO05D006154 2.4e-16 89.0 103 48.5
Solyc04g072200.3 Solanum lycopersicum HOM05D000439 ORTHO05D006154 4.1e-16 88.2 107 46.7
A03p16370 Brassica napus HOM05D000439 ORTHO05D006154 9.2e-16 87.0 106 50.9
PGSC0003DMG400044295 Solanum tuberosum HOM05D000439 ORTHO05D006154 9.2e-16 87.0 106 48.1
BraA03t10927Z Brassica rapa HOM05D000439 ORTHO05D006154 1.2e-15 86.7 107 50.5
MBI11_g04259_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D006154 2.1e-15 85.9 101 48.5
ATR0582G020 Amborella trichopoda HOM05D000439 ORTHO05D006154 2.7e-15 85.5 105 45.7
HanXRQChr05g0154491 Helianthus annuus HOM05D000439 ORTHO05D006154 4.6e-15 84.7 104 47.1
HanXRQChr05g0157581 Helianthus annuus HOM05D000439 ORTHO05D006154 4.6e-15 84.7 104 47.1
CAN.G1008.29 Capsicum annuum HOM05D000439 ORTHO05D006154 7.8e-15 84.0 108 45.4
CAN.G564.8 Capsicum annuum HOM05D000439 ORTHO05D006154 7.8e-15 84.0 107 43.0
Nitab4.5_0001216g0050 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.7e-14 82.8 84 48.8
CARHR257000 Cardamine hirsuta HOM05D000439 ORTHO05D006154 3.0e-14 82.0 82 50.0
Lsat_1_v5_gn_5_9321 Lactuca sativa HOM05D000439 ORTHO05D006154 5.1e-14 81.3 104 44.2
VMungo1309G0148 Vigna mungo HOM05D000439 ORTHO05D006154 5.1e-14 81.3 107 45.8
CAN.G919.14 Capsicum annuum HOM05D000439 ORTHO05D006154 4.3e-13 78.2 106 44.3
HPP92_011666 Vanilla planifolia HOM05D000439 ORTHO05D006154 4.7e-12 74.7 104 37.5
PGSC0003DMG400034493 Solanum tuberosum HOM05D000439 ORTHO05D006154 6.8e-11 70.9 85 45.9
CAN.G919.28 Capsicum annuum HOM05D000439 ORTHO05D006154 9.9e-10 67.0 117 40.2
Os03g0851400 Oryza sativa ssp. japonica HOM05D000439 ORTHO05D006154 5.1e-06 54.7 78 35.9


User provided reference genes

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