Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 3.8e-300 1034.6 775 100.0
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.0e-180 637.9 676 83.0
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 3.2e-174 616.3 773 61.8
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 6.2e-170 602.1 774 70.4
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 1.1e-169 601.3 773 62.1
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 4.0e-161 572.8 773 67.7
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 5.8e-160 568.9 773 69.1
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 1.4e-158 564.3 535 63.6
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 1.2e-157 561.2 761 71.2
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 7.9e-157 558.5 776 68.4
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 1.3e-156 557.8 534 52.8
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 3.0e-156 556.6 774 57.8
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 3.9e-156 556.2 775 67.1
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 1.3e-154 551.2 774 68.1
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 4.8e-154 549.3 535 61.7
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 1.8e-153 547.4 773 68.8
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 1.8e-153 547.4 773 68.8
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 4.5e-152 542.7 775 68.4
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 1.9e-150 537.3 453 60.5
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 7.2e-150 535.4 775 66.5
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 2.3e-148 530.4 727 68.1
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 2.0e-147 527.3 727 67.5
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 1.1e-145 521.5 518 61.2
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.0e-143 515.0 539 58.8
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.0e-143 515.0 775 65.4
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.3e-143 514.6 539 58.8
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 6.5e-143 512.3 518 60.8
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 1.9e-142 510.8 775 65.3
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.7e-141 506.9 774 44.7
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.7e-141 506.9 774 44.7
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 4.7e-141 506.1 536 59.9
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.3e-140 503.8 523 58.9
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 5.7e-139 499.2 777 66.0
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 1.7e-138 497.7 539 58.3
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 2.6e-136 490.3 538 58.4
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 2.6e-136 490.3 775 65.4
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 3.5e-136 490.0 753 64.5
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 7.7e-136 488.8 498 61.2
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 7.7e-136 488.8 533 57.8
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 1.7e-135 487.6 783 62.8
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 2.5e-134 483.8 540 57.6
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 3.6e-133 479.9 663 70.3
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 1.0e-132 478.4 538 58.2
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 1.4e-132 478.0 692 61.6
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 3.0e-132 476.9 533 52.9
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 3.9e-132 476.5 534 57.3
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 8.8e-132 475.3 535 58.1
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 1.1e-131 474.9 535 58.1
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 1.5e-131 474.6 535 57.0
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 3.3e-131 473.4 535 52.9
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 3.3e-131 473.4 674 70.0
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 5.7e-131 472.6 535 55.9
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.4e-129 467.2 525 55.4
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 4.1e-129 466.5 457 61.1
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 5.3e-129 466.1 427 66.5
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 5.3e-129 466.1 593 74.9
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 1.2e-128 464.9 533 50.5
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 4.5e-128 463.0 714 63.4
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.7e-127 461.1 427 65.8
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 5.0e-127 459.5 672 68.3
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.1e-126 458.4 675 69.0
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 1.9e-126 457.6 467 62.7
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 2.5e-126 457.2 534 55.4
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.2e-125 454.9 358 73.5
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 1.6e-125 454.5 453 63.6
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 1.4e-124 451.4 553 56.8
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 2.3e-124 450.7 676 66.6
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 5.2e-124 449.5 769 61.9
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 2.0e-123 447.6 352 73.9
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 9.1e-121 438.7 535 52.5
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 5.9e-120 436.0 451 61.2
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 6.5e-119 432.6 813 56.9
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 4.2e-118 429.9 693 56.9
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 9.4e-118 428.7 459 58.8
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 6.1e-117 426.0 360 69.7
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.0e-116 425.2 462 58.0
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 1.8e-116 424.5 538 53.2
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 1.8e-116 424.5 538 53.2
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.3e-116 424.1 438 52.5
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 5.2e-116 422.9 444 58.6
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 1.5e-115 421.4 577 52.7
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 2.0e-115 421.0 327 76.5
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 3.4e-115 420.2 445 59.6
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 9.8e-115 418.7 535 53.5
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 3.7e-114 416.8 536 51.3
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.1e-113 415.2 457 59.1
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 2.7e-112 410.6 493 54.4
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.7e-112 410.6 564 75.4
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 4.5e-112 409.8 553 75.8
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 2.3e-111 407.5 537 52.1
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 5.0e-111 406.4 541 78.6
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.3e-110 403.7 535 51.2
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 2.1e-109 401.0 537 51.6
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 8.0e-109 399.1 505 57.4
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 1.0e-108 398.7 448 57.8
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 3.0e-108 397.1 443 59.6
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 4.1e-105 386.7 586 65.9
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 9.2e-105 385.6 317 71.9
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 1.7e-103 381.3 458 55.9
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 5.8e-99 366.3 344 62.2
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 1.6e-93 348.2 361 62.0
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 6.2e-77 293.1 538 36.4
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 9.9e-75 285.8 531 36.2
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 1.1e-70 272.3 523 43.0
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 1.3e-69 268.9 189 67.2
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.9e-57 228.4 201 55.7
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 3.7e-45 187.6 352 38.6
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.4e-41 175.6 364 42.3
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 1.5e-30 139.0 370 38.6
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 1.3e-26 125.9 215 54.4
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 3.5e-19 101.3 156 35.9
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 8.5e-18 96.7 129 41.1
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 2.1e-16 92.0 76 59.2
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.5e-14 85.9 48 75.0


User provided reference genes

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