Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 2.6e-294 1014.6 502 100.0
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 5.2e-242 840.9 482 84.0
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 3.5e-230 801.6 480 81.5
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 4.2e-228 794.7 484 78.1
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 7.2e-228 793.9 482 80.3
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 1.2e-227 793.1 502 77.7
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 4.7e-227 791.2 477 79.7
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 6.1e-227 790.8 477 79.5
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 8.0e-227 790.4 481 79.2
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 8.8e-226 786.9 481 78.8
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 2.0e-225 785.8 484 77.9
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 6.3e-224 780.8 510 74.9
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 3.1e-223 778.5 501 76.4
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 1.2e-222 776.5 482 78.4
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 1.6e-222 776.2 541 72.6
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 2.7e-222 775.4 490 77.1
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 1.3e-221 773.1 481 78.4
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 3.8e-221 771.5 497 75.5
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 3.8e-221 771.5 500 74.6
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.5e-220 769.6 486 77.6
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.9e-220 769.2 492 77.4
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 3.3e-220 768.5 536 71.6
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 4.3e-220 768.1 484 77.3
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 5.6e-220 767.7 490 78.2
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 9.5e-220 766.9 483 77.0
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 4.0e-218 761.5 484 76.4
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 5.2e-218 761.1 490 75.7
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 3.4e-217 758.4 485 76.1
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 4.4e-217 758.1 499 76.6
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 9.8e-217 756.9 494 75.1
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 1.7e-216 756.1 486 76.1
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 4.1e-215 751.5 497 74.0
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 5.4e-215 751.1 502 73.7
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 7.0e-215 750.7 504 73.6
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 9.2e-215 750.4 480 76.0
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 1.6e-214 749.6 484 75.8
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 7.8e-214 747.3 508 73.0
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 7.8e-214 747.3 482 76.8
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 1.3e-213 746.5 496 73.0
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 4.3e-212 741.5 485 75.9
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 3.6e-211 738.4 488 75.6
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 4.0e-210 734.9 499 74.7
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 1.7e-208 729.6 476 73.9
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 6.4e-208 727.6 504 68.3
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 3.2e-207 725.3 479 73.7
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 3.0e-205 718.8 467 76.0
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 8.6e-205 717.2 482 72.4
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 2.5e-204 715.7 495 72.3
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 3.3e-204 715.3 513 71.0
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 6.4e-200 701.0 488 71.3
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 3.2e-199 698.7 516 67.2
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 2.1e-198 696.0 481 70.5
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 3.5e-198 695.3 477 71.5
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 1.0e-197 693.7 477 72.5
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 1.0e-197 693.7 501 68.9
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 2.3e-197 692.6 477 71.7
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 2.3e-197 692.6 536 65.9
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 2.3e-197 692.6 477 71.1
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 5.1e-197 691.4 477 72.5
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 1.5e-196 689.9 499 67.9
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 1.9e-196 689.5 477 72.1
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 4.3e-196 688.3 477 71.1
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 1.8e-194 682.9 501 67.3
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 2.4e-194 682.6 499 68.1
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 6.8e-194 681.0 470 73.6
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 2.0e-193 679.5 502 67.3
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 1.9e-191 672.9 477 69.6
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 5.4e-191 671.4 477 69.8
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 9.2e-191 670.6 477 69.8
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 1.6e-190 669.8 477 69.8
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 2.1e-190 669.5 521 64.9
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 3.6e-187 658.7 478 68.8
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 6.2e-187 657.9 477 68.1
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 1.5e-185 653.3 487 68.0
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 2.0e-185 652.9 449 73.3
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.1e-183 647.1 571 61.1
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 4.8e-171 605.1 463 66.7
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 2.4e-170 602.8 446 67.5
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 5.8e-169 598.2 501 60.7
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 9.9e-169 597.4 459 68.2
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 1.7e-168 596.7 483 62.9
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 2.3e-165 586.3 481 64.2
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 2.8e-163 579.3 498 55.8
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 9.0e-162 574.3 496 55.4
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 4.5e-161 572.0 496 56.7
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 4.9e-160 568.5 483 60.5
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 5.1e-157 558.5 544 55.3
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 3.7e-155 552.4 588 53.2
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.9e-148 530.0 482 57.1
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 6.9e-146 521.5 504 52.0
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 2.6e-140 503.1 508 56.5
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 1.1e-130 471.1 488 50.0
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 1.4e-130 470.7 446 56.5
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 1.6e-126 457.2 274 77.0
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 4.2e-119 432.6 271 74.9
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 1.3e-112 411.0 255 73.3
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 2.8e-110 403.3 255 74.9
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 2.8e-110 403.3 488 49.6
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 1.4e-98 364.4 516 43.0
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.9e-90 337.4 199 80.4
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 3.5e-89 333.2 254 66.1
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 1.1e-87 328.2 591 33.0
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 3.1e-77 293.5 212 72.6
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 2.3e-72 277.3 530 32.8
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.1e-71 275.0 300 51.3
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 2.1e-70 270.8 209 67.9
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 4.4e-68 263.1 209 66.5
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 1.6e-65 254.6 197 63.5
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 7.8e-65 252.3 206 62.6
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 6.6e-64 249.2 206 61.7
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 8.7e-64 248.8 206 61.7
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 2.8e-62 243.8 524 32.6
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.2e-60 238.4 169 67.5
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 5.3e-37 159.8 85 84.7
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 5.3e-37 159.8 188 47.9
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 9.0e-37 159.1 323 34.7
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 1.1e-34 152.1 130 60.0
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.1e-26 125.6 71 80.3
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.4e-24 118.6 106 65.1
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 2.2e-22 111.3 431 25.1
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 1.3e-14 85.5 44 88.6
Nn2g11046 Nelumbo nucifera HOM05D006175 ORTHO05D008081 5.3e-13 80.1 52 75.0
Gorai.009G404500 Gossypium raimondii HOM05D006175 ORTHO05D047312 8.5e-11 72.8 56 62.5
Gohir.D04G101160 Gossypium hirsutum HOM05D006175 ORTHO05D047312 3.2e-10 70.9 52 65.4
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 5.5e-10 70.1 33 90.9
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 5.5e-10 70.1 33 90.9
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 5.5e-10 70.1 33 90.9
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 5.5e-10 70.1 33 90.9
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 1.6e-09 68.6 33 87.9
TPR.G28017 Trifolium pratense HOM05D006175 ORTHO05D008081 3.6e-09 67.4 115 40.0
Actinidia31560 Actinidia chinensis HOM05D006175 ORTHO05D008081 3.7e-06 57.4 77 50.6


User provided reference genes

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