Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0210 Trochodendron aralioides HOM05D004329 ORTHO05D005516 3.4e-158 561.6 284 100.0
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 7.0e-127 457.6 318 77.4
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 6.3e-112 407.9 314 69.4
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 1.6e-110 403.3 318 67.0
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 5.0e-109 398.3 318 66.0
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 1.9e-108 396.4 316 65.2
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 3.2e-108 395.6 318 66.4
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 3.6e-107 392.1 316 64.9
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 8.8e-106 387.5 318 64.8
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 2.6e-105 386.0 317 64.7
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 1.7e-104 383.3 322 63.7
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 1.7e-104 383.3 330 62.1
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 2.2e-104 382.9 317 64.4
MBI13_g15007_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 2.8e-104 382.5 318 66.0
Actinidia08906 Actinidia chinensis HOM05D000877 ORTHO05D001509 6.3e-104 381.3 318 63.5
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 6.3e-104 381.3 318 62.9
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 4.1e-103 378.6 318 63.2
CiPaw.09G139600 Carya illinoinensis HOM05D004329 ORTHO05D005516 4.1e-103 378.6 318 63.8
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 4.1e-103 378.6 318 65.1
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 7.0e-103 377.9 318 63.5
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 9.1e-103 377.5 315 62.2
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 1.6e-102 376.7 318 63.8
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 2.0e-102 376.3 318 62.3
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 4.5e-102 375.2 318 64.5
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 5.9e-102 374.8 318 63.5
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 5.9e-102 374.8 316 63.9
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 1.0e-101 374.0 318 62.3
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 1.7e-101 373.2 318 63.8
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 8.6e-101 370.9 318 62.3
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 1.1e-100 370.5 318 61.9
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 1.5e-100 370.2 316 61.7
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.9e-100 369.8 316 62.3
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 1.9e-100 369.8 317 60.3
Nitab4.5_0017885g0010 Nicotiana tabacum HOM05D004329 ORTHO05D005516 2.5e-100 369.4 312 63.5
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 4.3e-100 368.6 318 62.3
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 1.2e-99 367.1 319 61.8
PGSC0003DMG400015501 Solanum tuberosum HOM05D004329 ORTHO05D005516 1.2e-99 367.1 316 63.0
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 1.6e-99 366.7 316 63.6
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 1.6e-99 366.7 316 61.1
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 1.6e-99 366.7 318 63.2
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 1.4e-98 363.6 318 62.9
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 1.8e-98 363.2 316 63.0
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 1.8e-98 363.2 316 62.7
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 6.8e-98 361.3 316 62.0
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 2.6e-97 359.4 318 60.4
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 1.3e-96 357.1 316 62.3
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 1.7e-96 356.7 317 59.3
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 1.7e-96 356.7 316 60.1
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 1.7e-96 356.7 316 62.0
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 1.7e-96 356.7 316 61.7
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 2.2e-96 356.3 317 59.6
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 4.9e-96 355.1 316 62.3
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 4.9e-96 355.1 317 60.3
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 1.1e-95 354.0 328 58.5
Lj5A87T69 Lonicera japonica HOM05D004329 ORTHO05D005516 1.8e-95 353.2 306 61.1
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 3.2e-95 352.4 316 61.4
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 9.2e-95 350.9 316 60.4
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 1.6e-94 350.1 330 57.6
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 2.0e-94 349.7 316 58.5
Hund02504 Selenicereus undatus HOM05D004329 ORTHO05D005516 2.7e-94 349.4 317 59.9
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 7.8e-94 347.8 318 57.5
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 1.7e-93 346.7 318 57.9
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 2.3e-93 346.3 318 59.7
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 3.9e-93 345.5 298 60.4
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 3.9e-93 345.5 318 56.6
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 6.6e-93 344.7 317 57.1
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 8.6e-93 344.4 316 59.5
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 1.9e-92 343.2 316 60.1
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 2.5e-92 342.8 318 57.2
DCAR_016350 Daucus carota HOM05D004329 ORTHO05D005516 3.3e-92 342.4 316 57.3
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 3.3e-92 342.4 316 59.5
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 5.6e-92 341.7 316 58.9
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 1.6e-91 340.1 317 58.4
Cc09_g07950 Coffea canephora HOM05D004329 ORTHO05D005516 1.6e-91 340.1 318 58.8
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 1.6e-91 340.1 315 56.5
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 2.1e-91 339.7 307 59.0
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 2.8e-91 339.3 318 56.6
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 4.7e-91 338.6 316 57.0
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 1.4e-90 337.0 317 56.2
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 1.8e-90 336.7 318 56.0
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 2.3e-90 336.3 318 56.6
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 2.3e-90 336.3 318 56.3
A02p41850 Brassica napus HOM05D004329 ORTHO05D005516 4.0e-90 335.5 318 58.2
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 5.2e-90 335.1 316 56.6
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 5.2e-90 335.1 316 56.6
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 1.2e-89 334.0 316 56.3
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 1.2e-89 334.0 318 56.6
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 1.2e-89 334.0 318 55.7
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 4.4e-89 332.0 318 56.6
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 1.7e-88 330.1 316 56.3
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 1.7e-88 330.1 318 56.0
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 2.2e-88 329.7 316 56.0
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 3.7e-88 328.9 316 55.7
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 3.7e-88 328.9 316 55.7
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 3.7e-88 328.9 316 55.7
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 6.4e-88 328.2 312 57.1
Cpa.g.sc13.162 Carica papaya HOM05D004329 ORTHO05D005516 6.0e-86 321.6 350 53.7
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 1.0e-85 320.9 314 55.7
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 1.3e-85 320.5 285 62.5
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 1.3e-85 320.5 319 54.5
Os08g0323000 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D005516 1.3e-85 320.5 315 54.0
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 1.7e-85 320.1 321 55.5
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 6.6e-85 318.2 316 55.1
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 1.1e-84 317.4 316 53.8
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 1.5e-84 317.0 318 54.4
CDE04G3457 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 2.5e-84 316.2 292 58.6
BcaB07g29807 Brassica carinata HOM05D004329 ORTHO05D005516 4.3e-84 315.5 340 52.1
MBI13_g43178_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 6.2e-83 311.6 307 58.0
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 2.3e-82 309.7 318 51.9
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 2.0e-81 306.6 246 66.3
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 6.4e-80 301.6 244 63.9
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 2.4e-79 299.7 314 52.5
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 7.1e-79 298.1 237 63.7
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 1.2e-78 297.4 311 52.7
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 7.3e-76 288.1 278 56.5
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 1.2e-75 287.3 245 61.6
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.6e-75 287.0 258 59.7
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 1.5e-73 280.4 298 52.3
SEGI_15405 Sequoiadendron giganteum HOM05D004329 ORTHO05D005516 1.2e-70 270.8 322 47.2
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 3.5e-70 269.2 334 47.9
CDE07G1247 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 1.0e-69 267.7 214 65.0
Cc00_g30130 Coffea canephora HOM05D004329 ORTHO05D005516 2.2e-64 250.0 244 57.4
FAN18G2676 Fragaria x ananassa HOM05D004329 ORTHO05D005516 4.0e-58 229.2 240 52.9
HPP92_028710 Vanilla planifolia HOM05D004329 ORTHO05D005516 2.1e-54 216.9 234 53.8
Aqoxy5G01090 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 1.0e-53 214.5 305 44.3
Mapoly0153s0017 Marchantia polymorpha HOM05D004329 ORTHO05D005516 2.0e-49 200.3 322 39.1
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 1.3e-48 197.6 325 37.8
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 4.9e-48 195.7 233 50.6
Pp3c15_22190 Physcomitrium patens HOM05D004329 ORTHO05D005516 5.1e-45 185.7 313 36.7
CARHR275760 Cardamine hirsuta HOM05D004329 ORTHO05D005516 5.6e-44 182.2 188 53.7
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 2.4e-34 150.2 123 65.9
C02p61780 Brassica napus HOM05D004329 ORTHO05D005516 3.1e-34 149.8 145 57.2
SMO356G0738 Selaginella moellendorffii HOM05D004329 ORTHO05D005516 5.3e-34 149.1 317 33.8
CBR_g20988 Chara braunii HOM05D004329 ORTHO05D005516 2.5e-31 140.2 347 31.7
C02p61790 Brassica napus HOM05D004329 ORTHO05D005516 5.7e-28 129.0 98 64.3
Haze_22596 Corylus avellana HOM05D004329 ORTHO05D010424 3.1e-26 123.2 73 79.5
CARHR275770 Cardamine hirsuta HOM05D004329 ORTHO05D005516 2.0e-25 120.6 99 58.6
AagrBONN_evm.TU.Sc2ySwM_228.1280 Anthoceros agrestis HOM05D004329 ORTHO05D005516 2.7e-22 110.2 186 36.0
CAN.G865.5 Capsicum annuum HOM05D004329 ORTHO05D005516 9.7e-20 101.7 67 64.2
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 9.7e-12 75.1 45 75.6
CSS0048280 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.1e-10 71.6 90 50.0
Lsat_1_v5_gn_2_122301 Lactuca sativa HOM05D009063 ORTHO05D011082 3.5e-09 66.6 97 39.2
MCO15G338 Micromonas commoda HOM05D004329 ORTHO05D005516 1.9e-07 60.8 247 27.1


User provided reference genes

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