Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 4.1e-282 974.2 527 100.0
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 1.5e-167 593.6 520 67.3
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 4.9e-158 562.0 472 67.2
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 5.4e-157 558.5 478 66.7
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 5.0e-155 552.0 530 63.8
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.5e-154 550.4 537 63.7
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.5e-151 540.4 531 63.7
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.0e-151 540.0 540 61.7
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 1.5e-146 523.9 536 60.1
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 6.2e-145 518.5 479 65.8
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 1.2e-143 514.2 511 62.8
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 7.5e-143 511.5 475 65.3
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 1.2e-137 494.2 462 63.9
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 8.9e-136 488.0 460 63.0
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 5.8e-135 485.3 470 62.8
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.7e-134 483.8 517 60.7
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 2.9e-134 483.0 530 57.5
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 6.4e-134 481.9 461 61.4
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 6.4e-134 481.9 546 55.9
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 8.3e-134 481.5 527 56.0
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 1.4e-133 480.7 577 54.1
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 1.4e-133 480.7 459 63.8
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 1.9e-133 480.3 541 56.2
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 5.4e-133 478.8 458 63.3
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 2.7e-132 476.5 470 62.3
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 6.0e-132 475.3 490 60.2
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 7.8e-132 474.9 456 63.6
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 1.5e-130 470.7 509 59.9
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 7.3e-130 468.4 534 56.7
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 9.6e-130 468.0 472 55.1
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 1.6e-129 467.2 519 57.2
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 2.8e-129 466.5 503 59.8
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 3.6e-129 466.1 479 61.2
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 6.2e-129 465.3 459 62.7
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 6.2e-129 465.3 507 58.2
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 1.1e-128 464.5 459 61.9
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 1.4e-128 464.2 505 58.0
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 1.8e-128 463.8 459 62.5
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 2.4e-128 463.4 503 59.2
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 2.4e-128 463.4 463 61.8
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 4.0e-128 462.6 468 61.1
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 6.8e-128 461.8 458 60.5
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 2.6e-127 459.9 528 57.0
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 4.4e-127 459.1 464 61.0
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 9.9e-127 458.0 458 62.4
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 2.2e-126 456.8 512 58.4
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 8.4e-126 454.9 506 53.8
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.4e-125 454.1 473 60.7
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.9e-125 453.8 476 60.5
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 9.3e-125 451.4 467 59.1
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 7.8e-124 448.4 457 60.0
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 3.9e-123 446.0 459 61.7
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 6.6e-123 445.3 461 60.7
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 1.1e-122 444.5 457 60.4
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 5.6e-122 442.2 461 61.2
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 7.3e-122 441.8 462 61.5
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 2.1e-121 440.3 457 60.0
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 3.6e-121 439.5 468 58.5
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 1.4e-120 437.6 399 65.7
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 1.8e-120 437.2 456 61.4
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 6.9e-120 435.3 464 58.8
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 9.0e-120 434.9 457 60.0
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 9.0e-120 434.9 467 59.1
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 6.4e-118 428.7 462 60.0
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 6.4e-118 428.7 459 58.4
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 3.5e-116 422.9 496 55.2
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 7.9e-116 421.8 468 57.9
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 1.0e-115 421.4 545 53.6
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 5.1e-115 419.1 499 55.9
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 1.1e-114 417.9 496 54.6
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 4.3e-114 416.0 486 54.5
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 5.6e-114 415.6 508 54.9
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 8.1e-113 411.8 473 58.1
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 4.5e-111 406.0 466 57.1
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 9.9e-111 404.8 467 55.9
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 3.0e-107 393.3 467 54.8
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 3.9e-107 392.9 479 53.9
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 6.7e-107 392.1 493 53.1
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 3.7e-105 386.3 485 53.2
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 5.5e-101 372.5 469 53.9
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 5.5e-101 372.5 469 53.9
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 5.5e-101 372.5 472 53.0
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 4.6e-100 369.4 483 53.6
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 1.3e-99 367.9 461 53.1
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 5.1e-99 365.9 465 54.2
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 1.5e-98 364.4 435 56.1
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 1.5e-98 364.4 462 53.5
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 1.4e-96 357.8 462 53.0
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 3.8e-94 349.7 489 44.8
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 5.0e-94 349.4 776 38.7
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 8.4e-94 348.6 460 54.6
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.4e-88 330.5 540 45.7
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.4e-88 330.5 540 45.7
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 3.8e-86 323.2 545 44.0
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 1.2e-84 318.2 480 51.0
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 1.3e-78 298.1 690 39.7
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 3.3e-66 256.9 277 52.0
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 6.5e-62 242.7 259 51.7
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 3.2e-61 240.4 358 49.4
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 2.4e-56 224.2 215 57.2
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 7.7e-47 192.6 292 41.8
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 2.9e-46 190.7 244 45.5
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 3.8e-46 190.3 120 80.8
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 6.8e-43 179.5 225 49.8
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 4.4e-42 176.8 198 53.5
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 8.0e-36 156.0 403 37.7
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.5e-34 151.8 107 74.8
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 2.6e-34 151.0 98 75.5
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 6.4e-33 146.4 82 92.7
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 3.2e-32 144.1 157 52.2
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 4.7e-28 130.2 146 51.4
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 1.4e-27 128.6 146 51.4
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 5.8e-26 123.2 161 46.0
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 2.9e-25 120.9 168 51.2
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 3.7e-25 120.6 150 49.3
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 5.1e-22 110.2 170 42.9
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 4.7e-20 103.6 178 41.0
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 8.9e-19 99.4 96 53.1
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 3.2e-16 90.9 338 38.2
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.1e-13 82.4 270 39.6
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 8.1e-12 76.3 50 76.0


User provided reference genes

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