Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR560G0009 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.6e-96 357.1 348 100.0
Nn2g11173 Nelumbo nucifera HOM05D005013 ORTHO05D006005 4.6e-48 196.1 147 79.6
TAR633G2449 Trochodendron aralioides HOM05D005013 ORTHO05D006005 3.0e-47 193.4 356 57.9
Dinv30436 Davidia involucrata HOM05D005013 ORTHO05D006005 6.1e-40 169.1 355 56.9
MD17G1184000 Malus domestica HOM05D005013 ORTHO05D006005 3.4e-35 153.3 358 50.6
MD09G1202900 Malus domestica HOM05D005013 ORTHO05D006005 1.7e-34 151.0 370 46.8
CSS0033602 Camellia sinensis var. sinensis HOM05D005013 ORTHO05D006005 5.1e-31 139.4 365 55.6
Prupe.3G059100 Prunus persica HOM05D005013 ORTHO05D006005 2.0e-30 137.5 347 58.2
Haze_15847 Corylus avellana HOM05D005013 ORTHO05D006005 4.4e-30 136.3 148 66.2
Aqoxy2G02285 Aquilegia oxysepala HOM05D005013 ORTHO05D006005 6.3e-29 132.5 210 61.4
QL05p020046 Quercus lobata HOM05D005013 ORTHO05D006005 6.3e-29 132.5 138 62.3
FAN02G3590 Fragaria x ananassa HOM05D005013 ORTHO05D006005 1.4e-28 131.3 366 45.1
CANSAT56G0983 Cannabis sativa HOM05D005013 ORTHO05D006005 6.9e-28 129.0 144 54.2
RcHm_v2.0_Chr2g0140531 Rosa chinensis HOM05D005013 ORTHO05D006005 3.4e-27 126.7 351 50.7
FvH4_6g32381 Fragaria vesca HOM05D005013 ORTHO05D006005 1.0e-26 125.2 352 49.1
FAN09G0199 Fragaria x ananassa HOM05D005013 ORTHO05D006005 1.0e-26 125.2 355 47.3
Prupe.1G178600 Prunus persica HOM05D005013 ORTHO05D006005 5.0e-26 122.9 347 56.8
Hma1.2p1_1232F.1_g268910 Hydrangea macrophylla HOM05D005013 ORTHO05D006005 8.5e-26 122.1 118 71.2
FAN14G4508 Fragaria x ananassa HOM05D005013 ORTHO05D006005 1.1e-25 121.7 352 48.6
Sed0027607 Sechium edule HOM05D005013 ORTHO05D006005 1.4e-25 121.3 136 52.2
Lsat_1_v5_gn_1_36740 Lactuca sativa HOM05D005013 ORTHO05D006005 4.2e-25 119.8 211 56.9
MELO3C024438.2 Cucumis melo HOM05D005013 ORTHO05D006005 5.5e-25 119.4 146 50.7
arahy.Tifrunner.gnm1.ann1.VUMD9N Arachis hypogaea HOM05D005013 ORTHO05D006005 2.1e-24 117.5 146 56.8
ClCG09G000200 Citrullus lanatus HOM05D005013 ORTHO05D006005 2.1e-24 117.5 146 48.6
FAN05G1466 Fragaria x ananassa HOM05D005013 ORTHO05D006005 2.7e-24 117.1 351 49.9
Sopen03g039850 Solanum pennellii HOM05D005013 ORTHO05D006005 2.7e-24 117.1 134 56.7
CAN.G1143.13 Capsicum annuum HOM05D005013 ORTHO05D006005 3.6e-24 116.7 145 56.6
vmacro18853 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 6.1e-24 115.9 116 69.8
Cc04_g02560 Coffea canephora HOM05D005013 ORTHO05D006005 7.9e-24 115.5 144 58.3
Glyma.08G201000 Glycine max HOM05D005013 ORTHO05D006005 1.0e-23 115.2 128 60.2
HanXRQChr02g0032251 Helianthus annuus HOM05D005013 ORTHO05D006005 1.0e-23 115.2 147 59.2
PSO513G0173 Papaver somniferum HOM05D005013 ORTHO05D006005 1.0e-23 115.2 133 60.2
Manes.04G134200 Manihot esculenta HOM05D005013 ORTHO05D006005 1.4e-23 114.8 121 56.2
Solyc03g121020.3 Solanum lycopersicum HOM05D005013 ORTHO05D006005 1.4e-23 114.8 121 59.5
CiPaw.02G145800 Carya illinoinensis HOM05D005013 ORTHO05D006005 3.0e-23 113.6 151 58.3
Glyma.07G015500 Glycine max HOM05D005013 ORTHO05D006005 3.9e-23 113.2 128 62.5
Lalb_Chr04g0262971 Lupinus albus HOM05D005013 ORTHO05D006005 3.9e-23 113.2 142 59.9
VMungo0331G0134 Vigna mungo HOM05D005013 ORTHO05D006005 1.1e-22 111.7 127 62.2
Phvul.010G145300 Phaseolus vulgaris HOM05D005013 ORTHO05D006005 3.3e-22 110.2 127 62.2
Ciclev10025066m.g Citrus clementina HOM05D005013 ORTHO05D006005 4.4e-22 109.8 125 57.6
Lalb_Chr22g0351551 Lupinus albus HOM05D005013 ORTHO05D006005 1.3e-21 108.2 135 49.6
Duzib235G0505 Durio zibethinus HOM05D005013 ORTHO05D006005 2.2e-21 107.5 131 56.5
Lj9C512T10 Lonicera japonica HOM05D005013 ORTHO05D006005 2.2e-21 107.5 209 55.5
Manes.11G033651 Manihot esculenta HOM05D005013 ORTHO05D006005 3.7e-21 106.7 121 65.3
Duzib192G0488 Durio zibethinus HOM05D005013 ORTHO05D006005 4.8e-21 106.3 131 64.9
Thecc.06G100000 Theobroma cacao HOM05D005013 ORTHO05D006005 8.2e-21 105.5 135 61.5
Rhsim08G0227500 Rhododendron simsii HOM05D005013 ORTHO05D006005 1.1e-20 105.1 132 64.4
TWI12G0488 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 1.1e-20 105.1 144 50.7
COL.COLO4_30512 Corchorus olitorius HOM05D005013 ORTHO05D006005 1.4e-20 104.8 144 59.7
ECA247G2560 Erigeron canadensis HOM05D005013 ORTHO05D006005 1.8e-20 104.4 147 51.7
arahy.Tifrunner.gnm1.ann1.1M6YYJ Arachis hypogaea HOM05D005013 ORTHO05D006005 2.4e-20 104.0 119 68.9
CsaV3_7G035280 Cucumis sativus L. HOM05D005013 ORTHO05D006005 4.1e-20 103.2 146 46.6
MSTRG.4752 Avicennia marina HOM05D005013 ORTHO05D006005 5.3e-20 102.8 112 58.0
SalBow7G4596 Salvia bowleyana HOM05D005013 ORTHO05D006005 7.0e-20 102.4 90 65.6
TWI75G0851 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 7.0e-20 102.4 125 60.8
DCAR_016188 Daucus carota HOM05D005013 ORTHO05D006005 9.1e-20 102.1 131 52.7
Lj3g0013010 Lotus japonicus HOM05D005013 ORTHO05D006005 1.2e-19 101.7 135 60.7
Actinidia32097 Actinidia chinensis HOM05D005013 ORTHO05D006005 1.6e-19 101.3 87 62.1
arahy.Tifrunner.gnm1.ann1.R367CR Arachis hypogaea HOM05D005013 ORTHO05D006005 1.6e-19 101.3 119 68.1
arahy.Tifrunner.gnm1.ann1.YYV7TY Arachis hypogaea HOM05D005013 ORTHO05D006005 1.6e-19 101.3 117 53.8
Gohir.A09G081200 Gossypium hirsutum HOM05D005013 ORTHO05D006005 2.6e-19 100.5 135 57.0
Potri.003G048900 Populus trichocarpa HOM05D005013 ORTHO05D006005 2.6e-19 100.5 123 60.2
Cpa.g.sc109.1 Carica papaya HOM05D005013 ORTHO05D006005 4.5e-19 99.8 146 58.2
Nitab4.5_0006467g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 5.9e-19 99.4 124 61.3
PSO339G6278 Papaver somniferum HOM05D005013 ORTHO05D006005 5.9e-19 99.4 130 52.3
SGA_v2.0_scaffold4G02026 Striga asiatica HOM05D005013 ORTHO05D006005 5.9e-19 99.4 109 62.4
Gohir.D09G081300 Gossypium hirsutum HOM05D005013 ORTHO05D006005 1.0e-18 98.6 135 56.3
Gorai.006G096900 Gossypium raimondii HOM05D005013 ORTHO05D006005 1.0e-18 98.6 135 56.3
Oeu023601.1 Olea europaea HOM05D005013 ORTHO05D006005 1.3e-18 98.2 121 47.9
Potri.001G190000 Populus trichocarpa HOM05D005013 ORTHO05D006005 6.5e-18 95.9 119 55.5
Eucgr.F03078 Eucalyptus grandis HOM05D005013 ORTHO05D006005 8.5e-18 95.5 146 60.3
Sabra01G0151600 Salix brachista HOM05D005013 ORTHO05D006005 1.1e-17 95.1 120 60.0
Sc15g0001880 Simmondsia chinensis HOM05D005013 ORTHO05D006005 1.1e-17 95.1 209 53.6
Oeu026780.1 Olea europaea HOM05D005013 ORTHO05D006005 7.2e-17 92.4 111 64.9
PGR102G0015 Punica granatum HOM05D005013 ORTHO05D006005 6.1e-16 89.4 150 53.3
Nitab4.5_0006902g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 1.0e-15 88.6 56 75.0
Atru.chr1.3523 Acer truncatum HOM05D005013 ORTHO05D006005 1.8e-15 87.8 140 52.9
Medtr8g014460 Medicago truncatula HOM05D005013 ORTHO05D006005 1.8e-15 87.8 58 72.4
Gohir.D03G057900 Gossypium hirsutum HOM05D005013 ORTHO05D006005 2.3e-15 87.4 127 56.7
Duzib160G0376 Durio zibethinus HOM05D005013 ORTHO05D006005 4.0e-15 86.7 131 43.5
TAR369G0672 Trochodendron aralioides HOM05D005013 ORTHO05D006005 4.0e-15 86.7 46 87.0
Gohir.A02G117400 Gossypium hirsutum HOM05D005013 ORTHO05D006005 5.2e-15 86.3 127 47.2
TPR.G26938 Trifolium pratense HOM05D005013 ORTHO05D006005 5.2e-15 86.3 141 58.2
Gorai.003G061700 Gossypium raimondii HOM05D005013 ORTHO05D006005 8.8e-15 85.5 144 53.5
Psat2g107800 Pisum sativum HOM05D005013 ORTHO05D006005 8.8e-15 85.5 135 51.1
Ca_23262_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 1.2e-14 85.1 58 72.4
Oeu026781.2 Olea europaea HOM05D005013 ORTHO05D006005 1.2e-14 85.1 123 42.3
unitig_52.g17097 Utricularia gibba HOM05D005013 ORTHO05D006005 2.6e-14 84.0 87 48.3
Peaxi162Scf00038g01028 Petunia axillaris HOM05D005013 ORTHO05D006005 2.8e-13 80.5 60 73.3
EL10Ac9g21206 Beta vulgaris HOM05D005013 ORTHO05D006005 3.7e-13 80.1 122 54.9
HPP92_015196 Vanilla planifolia HOM05D005013 ORTHO05D006005 8.2e-13 79.0 125 58.4
Hund07600 Selenicereus undatus HOM05D005013 ORTHO05D006005 1.8e-12 77.8 100 59.0
Lsat_1_v5_gn_4_97461 Lactuca sativa HOM05D005013 ORTHO05D006005 1.6e-11 74.7 147 54.4
TAR369G0235 Trochodendron aralioides HOM05D005013 ORTHO05D006005 2.0e-11 74.3 154 50.0
Ah.01g022080 Amaranthus hybridus HOM05D005013 ORTHO05D006005 2.7e-11 73.9 102 54.9
MBI04_g36817_MAGBIO Magnolia biondii HOM05D005013 ORTHO05D006005 2.7e-11 73.9 355 39.4
Ah.01g005800 Amaranthus hybridus HOM05D005013 ORTHO05D006005 3.5e-11 73.6 145 36.6
HanXRQChr09g0276241 Helianthus annuus HOM05D005013 ORTHO05D006005 1.3e-10 71.6 129 41.1
Aa31LG4G90 Aethionema arabicum HOM05D005013 ORTHO05D006005 1.9e-09 67.8 145 46.9
CDE12G0264 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 4.2e-09 66.6 46 67.4
CAN.G1143.12 Capsicum annuum HOM05D005013 ORTHO05D006005 5.5e-09 66.2 134 40.3
Thhalv10018561m.g Eutrema salsugineum HOM05D005013 ORTHO05D006005 5.5e-09 66.2 50 64.0
SHI11095 Sapria himalayana HOM05D005013 ORTHO05D006005 5.5e-09 66.2 107 52.3
AUR62022205 Chenopodium quinoa HOM05D005013 ORTHO05D006005 7.2e-09 65.9 119 41.2
CARHR074670 Cardamine hirsuta HOM05D005013 ORTHO05D006005 1.2e-08 65.1 121 48.8
Sp5g36040 Schrenkiella parvula HOM05D005013 ORTHO05D006005 3.6e-08 63.5 134 47.0
Ca_23271_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 1.0e-07 62.0 48 64.6
Carub.0002s2777 Capsella rubella HOM05D005013 ORTHO05D006005 3.0e-07 60.5 128 50.0
ATR0661G470 Amborella trichopoda HOM05D005013 ORTHO05D006005 4.0e-07 60.1 50 60.0
AUR62031914 Chenopodium quinoa HOM05D005013 ORTHO05D006005 4.0e-07 60.1 119 48.7
GSVIVG01016983001 Vitis vinifera HOM05D005013 ORTHO05D006005 8.8e-07 58.9 30 83.3
THA.LOC104819998 Tarenaya hassleriana HOM05D005013 ORTHO05D006005 9.8e-06 55.5 31 77.4


User provided reference genes

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