Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 3.8e-160 568.2 296 100.0
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 3.8e-99 365.5 301 67.4
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 1.9e-98 363.2 297 68.0
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 7.1e-90 334.7 299 60.2
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 2.1e-86 323.2 300 60.7
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 2.8e-86 322.8 297 60.9
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 6.2e-86 321.6 299 61.2
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 1.4e-85 320.5 299 62.5
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 2.6e-84 316.2 301 60.1
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 1.3e-83 313.9 297 58.6
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 7.1e-82 308.1 300 60.3
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 2.5e-79 299.7 303 56.4
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 1.1e-77 294.3 297 54.5
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 1.8e-77 293.5 301 57.5
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 6.9e-77 291.6 297 58.6
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 2.6e-76 289.7 305 56.7
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 4.5e-76 288.9 299 56.9
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 1.6e-73 280.4 298 54.7
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 1.6e-73 280.4 304 54.9
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 2.1e-73 280.0 304 56.2
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 5.1e-72 275.4 304 53.3
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 8.7e-72 274.6 304 53.0
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.1e-71 274.2 304 53.3
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 1.9e-71 273.5 297 54.5
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 7.4e-71 271.6 297 53.9
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 9.6e-71 271.2 223 63.7
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 2.1e-70 270.0 308 53.2
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 6.2e-70 268.5 286 54.5
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.2e-68 264.2 267 58.4
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 2.0e-68 263.5 307 52.1
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 2.6e-68 263.1 300 54.3
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 2.6e-68 263.1 301 53.5
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 2.6e-68 263.1 308 51.3
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 3.4e-68 262.7 384 45.3
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 3.4e-68 262.7 298 52.7
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 4.5e-68 262.3 297 55.6
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 1.3e-67 260.8 305 50.8
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 2.2e-67 260.0 243 61.3
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 6.5e-67 258.5 311 53.1
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 8.4e-67 258.1 308 54.5
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 1.9e-66 256.9 301 53.2
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 3.2e-66 256.1 134 97.0
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 4.2e-66 255.8 354 46.3
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 7.1e-66 255.0 299 50.8
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 2.1e-65 253.4 295 51.9
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 2.7e-65 253.1 252 57.1
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 1.3e-64 250.8 298 52.7
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 2.3e-64 250.0 276 54.7
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 2.1e-62 243.4 260 55.0
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 4.8e-62 242.3 258 56.2
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 8.2e-62 241.5 312 49.0
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 1.4e-61 240.7 296 51.7
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 9.0e-61 238.0 304 49.7
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 3.4e-60 236.1 308 49.0
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 7.6e-60 235.0 299 47.2
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.2e-59 233.4 303 51.2
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 3.8e-59 232.6 314 47.5
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 6.5e-59 231.9 304 48.7
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 1.1e-58 231.1 277 52.0
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 2.7e-57 226.5 311 46.6
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 2.7e-57 226.5 306 49.7
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 3.6e-57 226.1 232 55.6
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 6.1e-57 225.3 308 48.4
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 1.0e-56 224.6 308 45.8
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 1.3e-56 224.2 311 46.9
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 1.8e-56 223.8 310 46.1
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 2.3e-56 223.4 311 46.9
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 2.3e-56 223.4 347 43.5
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 2.3e-56 223.4 278 50.0
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 5.1e-56 222.2 304 47.0
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 8.7e-56 221.5 303 45.9
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 8.7e-56 221.5 213 56.3
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.1e-55 221.1 304 48.7
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 1.1e-55 221.1 312 48.4
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 2.5e-55 219.9 296 46.3
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 4.3e-55 219.2 241 53.9
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 2.8e-54 216.5 306 46.7
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 2.8e-54 216.5 232 56.0
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 1.8e-53 213.8 303 47.9
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 5.3e-53 212.2 199 59.8
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 6.9e-53 211.8 207 60.4
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.5e-52 210.7 315 47.0
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 2.6e-52 209.9 335 42.1
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.0e-51 208.0 192 59.9
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 1.3e-51 207.6 195 59.0
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 1.7e-51 207.2 307 43.6
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 2.2e-51 206.8 301 45.2
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 3.8e-51 206.1 222 52.3
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 3.8e-51 206.1 358 41.3
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 6.5e-51 205.3 214 54.2
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 6.5e-51 205.3 295 44.4
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 8.5e-51 204.9 243 51.9
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 1.4e-50 204.1 239 51.5
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 3.2e-50 203.0 305 43.3
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 1.6e-49 200.7 304 44.1
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 7.9e-49 198.4 308 45.1
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 3.9e-48 196.1 211 54.5
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 1.7e-46 190.7 244 49.2
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 8.5e-43 178.3 150 68.0
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 6.7e-40 168.7 180 55.6
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 7.0e-37 158.7 310 38.4
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 1.5e-31 141.0 238 41.2
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 6.3e-30 135.6 227 41.0
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 8.8e-24 115.2 217 41.5
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 4.8e-22 109.4 209 35.9
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.6e-20 104.4 123 48.0
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 7.7e-20 102.1 166 42.8
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 3.6e-17 93.2 126 46.8
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 8.0e-17 92.0 62 71.0
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 8.8e-16 88.6 78 57.7
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.5e-15 87.8 184 35.9
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 7.0e-13 79.0 109 41.3
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 1.0e-11 75.1 123 39.0
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 1.7e-11 74.3 102 42.2
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 3.8e-11 73.2 76 55.3
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 8.6e-11 72.0 102 38.2
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.1e-09 67.4 48 64.6
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.8e-08 64.3 42 71.4
Sabra02G0016800 Salix brachista HOM05D006975 ORTHO05D008736 1.7e-06 57.8 108 43.5


User provided reference genes

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