Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR484G0003 Trochodendron aralioides HOM05D005035 ORTHO05D006141 3.2e-80 301.6 143 100.0
TAR629G3150 Trochodendron aralioides HOM05D005035 ORTHO05D006141 3.2e-80 301.6 143 100.0
TAR371G0568 Trochodendron aralioides HOM05D005035 ORTHO05D006141 4.5e-74 281.2 143 93.7
Nn4g22913 Nelumbo nucifera HOM05D005035 ORTHO05D006141 5.1e-70 267.7 146 88.4
GSVIVG01032540001 Vitis vinifera HOM05D005035 ORTHO05D006141 2.0e-69 265.8 146 87.7
vmacro05790 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 4.8e-68 261.2 145 86.2
Cfa007472 Carpinus fangiana HOM05D005035 ORTHO05D006141 8.2e-68 260.4 148 85.8
MBI14_g12780_MAGBIO Magnolia biondii HOM05D005035 ORTHO05D006141 8.2e-68 260.4 143 86.0
PSO591G0214 Papaver somniferum HOM05D005035 ORTHO05D006141 5.3e-67 257.7 144 83.3
Lalb_Chr21g0319261 Lupinus albus HOM05D005035 ORTHO05D006141 1.5e-66 256.1 146 84.2
CSS0048749 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.0e-66 255.8 145 86.2
Glyma.13G069100 Glycine max HOM05D005035 ORTHO05D006141 2.0e-66 255.8 145 82.8
Manes.15G180500 Manihot esculenta HOM05D005035 ORTHO05D006141 3.4e-66 255.0 150 83.3
PSO832G3976 Papaver somniferum HOM05D005035 ORTHO05D006141 3.4e-66 255.0 144 82.6
Prupe.3G278500 Prunus persica HOM05D005035 ORTHO05D006141 3.4e-66 255.0 145 84.8
MD09G1039900 Malus domestica HOM05D005035 ORTHO05D006141 4.5e-66 254.6 143 85.3
Lalb_Chr06g0176451 Lupinus albus HOM05D005035 ORTHO05D006141 7.7e-66 253.8 146 84.9
Actinidia06042 Actinidia chinensis HOM05D005035 ORTHO05D006141 1.3e-65 253.1 139 86.3
Phvul.004G020500 Phaseolus vulgaris HOM05D005035 ORTHO05D006141 1.7e-65 252.7 145 81.4
Glyma.19G013800 Glycine max HOM05D005035 ORTHO05D006141 2.9e-65 251.9 145 81.4
Ca_04227_v3 Cicer arietinum L. HOM05D005035 ORTHO05D006141 3.8e-65 251.5 145 82.1
FvH4_6g50060 Fragaria vesca HOM05D005035 ORTHO05D006141 3.8e-65 251.5 145 83.4
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 3.8e-65 251.5 144 83.3
CiPaw.03G034300 Carya illinoinensis HOM05D005035 ORTHO05D006141 5.0e-65 251.1 148 82.4
Gohir.A09G024500 Gossypium hirsutum HOM05D005035 ORTHO05D006141 5.0e-65 251.1 146 81.5
Gohir.A07G217600 Gossypium hirsutum HOM05D005035 ORTHO05D006141 6.5e-65 250.8 146 82.9
Manes.17G120300 Manihot esculenta HOM05D005035 ORTHO05D006141 8.5e-65 250.4 150 81.3
CANSAT21G0423 Cannabis sativa HOM05D005035 ORTHO05D006141 1.4e-64 249.6 146 82.9
Lj2g0024232 Lotus japonicus HOM05D005035 ORTHO05D006141 1.4e-64 249.6 145 81.4
Gohir.D07G224700 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.9e-64 249.2 146 82.2
Lalb_Chr02g0159811 Lupinus albus HOM05D005035 ORTHO05D006141 2.5e-64 248.8 146 82.9
Medtr6g008220 Medicago truncatula HOM05D005035 ORTHO05D006141 2.5e-64 248.8 145 80.7
Potri.001G350900 Populus trichocarpa HOM05D005035 ORTHO05D006141 2.5e-64 248.8 134 88.8
TPR.G31460 Trifolium pratense HOM05D005035 ORTHO05D006141 2.5e-64 248.8 145 80.7
RcHm_v2.0_Chr2g0170331 Rosa chinensis HOM05D005035 ORTHO05D006141 5.5e-64 247.7 145 82.1
PGR083G2790 Punica granatum HOM05D005035 ORTHO05D006141 7.2e-64 247.3 146 80.8
Sc06g0002600 Simmondsia chinensis HOM05D005035 ORTHO05D006141 9.4e-64 246.9 144 81.2
Aqoxy3G00882 Aquilegia oxysepala HOM05D005035 ORTHO05D006141 1.2e-63 246.5 142 83.1
Rhsim10G0028700 Rhododendron simsii HOM05D005035 ORTHO05D006141 2.7e-63 245.4 154 79.2
Ciclev10013034m.g Citrus clementina HOM05D005035 ORTHO05D006141 3.6e-63 245.0 149 79.9
Migut.H00159 Erythranthe guttata HOM05D005035 ORTHO05D006141 3.6e-63 245.0 147 82.3
MD17G1040500 Malus domestica HOM05D005035 ORTHO05D006141 8.0e-63 243.8 145 80.7
Thecc.04G003200 Theobroma cacao HOM05D005035 ORTHO05D006141 8.0e-63 243.8 146 80.1
Nitab4.5_0001952g0210 Nicotiana tabacum HOM05D005035 ORTHO05D006141 1.8e-62 242.7 147 81.6
Actinidia33975 Actinidia chinensis HOM05D005035 ORTHO05D006141 3.0e-62 241.9 143 79.0
Nitab4.5_0007185g0060 Nicotiana tabacum HOM05D005035 ORTHO05D006141 3.0e-62 241.9 147 81.6
Rhsim10G0028000 Rhododendron simsii HOM05D005035 ORTHO05D006141 3.0e-62 241.9 163 74.8
EL10Ac7g18004 Beta vulgaris HOM05D005035 ORTHO05D006141 3.9e-62 241.5 143 79.7
Lsat_1_v5_gn_0_16560 Lactuca sativa HOM05D005035 ORTHO05D006141 3.9e-62 241.5 135 83.0
Sabra16G0230300 Salix brachista HOM05D005035 ORTHO05D006141 3.9e-62 241.5 145 81.4
Solyc02g087230.3 Solanum lycopersicum HOM05D005035 ORTHO05D006141 6.7e-62 240.7 148 81.1
Sopen02g031970 Solanum pennellii HOM05D005035 ORTHO05D006141 6.7e-62 240.7 148 81.1
TWI56G1217 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 6.7e-62 240.7 121 90.9
Eucgr.J02172 Eucalyptus grandis HOM05D005035 ORTHO05D006141 1.1e-61 240.0 146 79.5
MSTRG.3309 Avicennia marina HOM05D005035 ORTHO05D006141 1.5e-61 239.6 146 81.5
Duzib147G0557 Durio zibethinus HOM05D005035 ORTHO05D006141 2.6e-61 238.8 146 78.1
CAN.G206.60 Capsicum annuum HOM05D005035 ORTHO05D006141 4.4e-61 238.0 147 79.6
CsaV3_5G037480 Cucumis sativus L. HOM05D005035 ORTHO05D006141 4.4e-61 238.0 145 75.9
Migut.K01356 Erythranthe guttata HOM05D005035 ORTHO05D006141 4.4e-61 238.0 139 79.9
SGA_v2.0_scaffold30G12503 Striga asiatica HOM05D005035 ORTHO05D006141 4.4e-61 238.0 135 85.2
AL3G42320 Arabidopsis lyrata HOM05D005035 ORTHO05D006141 5.7e-61 237.7 147 78.9
Carub.0003s2630 Capsella rubella HOM05D005035 ORTHO05D006141 7.4e-61 237.3 147 78.2
AT2G04700 Arabidopsis thaliana HOM05D005035 ORTHO05D006141 9.7e-61 236.9 147 78.2
MELO3C021510.2 Cucumis melo HOM05D005035 ORTHO05D006141 9.7e-61 236.9 145 76.6
TWI36G0797 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 9.7e-61 236.9 121 88.4
CDE04G0448 Ceratophyllum demersum HOM05D005035 ORTHO05D006141 1.3e-60 236.5 144 77.1
Cc07_g02630 Coffea canephora HOM05D005035 ORTHO05D006141 1.3e-60 236.5 146 78.8
HanXRQChr17g0548081 Helianthus annuus HOM05D005035 ORTHO05D006141 1.3e-60 236.5 137 81.0
Psat1g079560 Pisum sativum HOM05D005035 ORTHO05D006141 1.3e-60 236.5 132 82.6
THA.LOC104805419 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 1.3e-60 236.5 146 78.1
Sp2g17120 Schrenkiella parvula HOM05D005035 ORTHO05D006141 1.7e-60 236.1 146 76.7
Peaxi162Scf00129g00821 Petunia axillaris HOM05D005035 ORTHO05D006141 2.8e-60 235.3 145 79.3
Thhalv10027982m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 4.8e-60 234.6 146 78.1
ECA246G3539 Erigeron canadensis HOM05D005035 ORTHO05D006141 6.3e-60 234.2 138 81.9
Sp7g01920 Schrenkiella parvula HOM05D005035 ORTHO05D006141 8.2e-60 233.8 148 76.4
BcaB06g27429 Brassica carinata HOM05D005035 ORTHO05D006141 1.8e-59 232.6 144 77.1
BraA04t16958Z Brassica rapa HOM05D005035 ORTHO05D006141 1.8e-59 232.6 144 77.1
Aa31LG9G1530 Aethionema arabicum HOM05D005035 ORTHO05D006141 2.4e-59 232.3 146 76.0
A04p12970 Brassica napus HOM05D005035 ORTHO05D006141 2.4e-59 232.3 144 76.4
SalBow1G8037 Salvia bowleyana HOM05D005035 ORTHO05D006141 2.4e-59 232.3 154 76.6
BolC4t26254H Brassica oleracea HOM05D005035 ORTHO05D006141 3.1e-59 231.9 132 80.3
Duzib264G0892 Durio zibethinus HOM05D005035 ORTHO05D006141 3.1e-59 231.9 135 82.2
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 3.1e-59 231.9 136 80.1
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 3.1e-59 231.9 136 80.1
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 4.1e-59 231.5 136 80.1
Thhalv10005082m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 7.0e-59 230.7 118 88.1
Hund20034 Selenicereus undatus HOM05D005035 ORTHO05D006141 9.1e-59 230.3 133 82.7
HPP92_003737 Vanilla planifolia HOM05D005035 ORTHO05D006141 1.2e-58 229.9 145 73.8
MSTRG.23981 Avicennia marina HOM05D005035 ORTHO05D006141 2.0e-58 229.2 146 77.4
Gorai.001G259100 Gossypium raimondii HOM05D005035 ORTHO05D006141 2.0e-58 229.2 131 83.2
Hma1.2p1_0375F.1_g139040 Hydrangea macrophylla HOM05D005035 ORTHO05D006141 2.0e-58 229.2 138 77.5
COL.COLO4_06152 Corchorus olitorius HOM05D005035 ORTHO05D006141 7.7e-58 227.3 131 82.4
DCAR_011194 Daucus carota HOM05D005035 ORTHO05D006141 1.7e-57 226.1 132 78.8
QL93p0205_0142 Quercus lobata HOM05D005035 ORTHO05D006141 3.8e-57 224.9 152 72.4
Lsat_1_v5_gn_4_180660 Lactuca sativa HOM05D005035 ORTHO05D006141 6.5e-57 224.2 147 76.2
ClCG00G001700 Citrullus lanatus HOM05D005035 ORTHO05D006141 9.4e-56 220.3 174 62.6
ClCG09G018640 Citrullus lanatus HOM05D005035 ORTHO05D006141 9.4e-56 220.3 174 62.6
unitig_62.g23432 Utricularia gibba HOM05D005035 ORTHO05D006141 6.1e-55 217.6 123 84.6
AagrBONN_evm.TU.Sc2ySwM_340.374 Anthoceros agrestis HOM05D005035 ORTHO05D006141 8.0e-55 217.2 118 81.4
VMungo0464G2121 Vigna mungo HOM05D005035 ORTHO05D006141 1.0e-54 216.9 161 68.9
Sed0002098 Sechium edule HOM05D005035 ORTHO05D006141 1.8e-54 216.1 131 77.1
Mapoly0037s0068 Marchantia polymorpha HOM05D005035 ORTHO05D006141 2.3e-54 215.7 117 82.1
unitig_52.g17602 Utricularia gibba HOM05D005035 ORTHO05D006141 2.6e-53 212.2 135 74.8
SMO147G0038 Selaginella moellendorffii HOM05D005035 ORTHO05D006141 9.7e-53 210.3 112 82.1
ATR1101G065 Amborella trichopoda HOM05D005035 ORTHO05D006141 2.2e-52 209.1 104 90.4
Haze_14625 Corylus avellana HOM05D005035 ORTHO05D006141 1.8e-51 206.1 156 71.2
Pp3c4_19340 Physcomitrium patens HOM05D005035 ORTHO05D006141 1.8e-51 206.1 114 82.5
Os09g0249900 Oryza sativa ssp. japonica HOM05D005035 ORTHO05D006141 4.1e-51 204.9 116 77.6
Zm00001eb373700 Zea mays HOM05D005035 ORTHO05D006141 7.0e-51 204.1 132 71.2
Pp3c3_28450 Physcomitrium patens HOM05D005035 ORTHO05D006141 9.1e-51 203.8 114 79.8
CSS0001095 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.7e-49 199.5 147 70.7
Cre03.g193950 Chlamydomonas reinhardtii HOM05D005035 ORTHO05D006141 1.7e-49 199.5 144 63.2
THA.LOC104822811 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 2.2e-49 199.1 105 84.8
AUR62041855 Chenopodium quinoa HOM05D005035 ORTHO05D006141 1.1e-48 196.8 164 62.2
MCO16G017 Micromonas commoda HOM05D005035 ORTHO05D006141 1.5e-48 196.4 118 72.0
AUR62022118 Chenopodium quinoa HOM05D005035 ORTHO05D006141 2.5e-48 195.7 104 82.7
CSS0000898 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 4.2e-48 194.9 151 68.9
AUR62001211 Chenopodium quinoa HOM05D005035 ORTHO05D006141 7.2e-48 194.1 104 81.7
Gorai.006G028000 Gossypium raimondii HOM05D005035 ORTHO05D006141 2.1e-47 192.6 111 83.8
PRCOL_00001533 Prasinoderma coloniale HOM05D005035 ORTHO05D006141 2.1e-47 192.6 140 64.3
arahy.Tifrunner.gnm1.ann1.JZED56 Arachis hypogaea HOM05D005035 ORTHO05D006141 5.2e-46 188.0 141 68.8
arahy.Tifrunner.gnm1.ann1.IKM8ZR Arachis hypogaea HOM05D005035 ORTHO05D006141 5.4e-43 177.9 112 79.5
Atru.chr8.2413 Acer truncatum HOM05D005035 ORTHO05D006141 2.0e-42 176.0 152 63.8
CBR_g4436 Chara braunii HOM05D005035 ORTHO05D006141 2.0e-42 176.0 91 81.3
CARHR102650 Cardamine hirsuta HOM05D005035 ORTHO05D006141 5.9e-42 174.5 112 77.7
Nn3g17009 Nelumbo nucifera HOM05D005035 ORTHO05D006141 5.0e-41 171.4 97 84.5
SEGI_15320 Sequoiadendron giganteum HOM05D005035 ORTHO05D006141 9.5e-40 167.2 91 83.5
QL02p078168 Quercus lobata HOM05D005035 ORTHO05D006141 1.5e-37 159.8 78 87.2
AUR62032082 Chenopodium quinoa HOM05D005035 ORTHO05D006141 4.9e-36 154.8 104 73.1
Gohir.D09G023800 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.5e-29 133.3 86 79.1
AUR62026990 Chenopodium quinoa HOM05D005035 ORTHO05D006141 2.9e-28 129.0 104 60.6
Rhsim08G0061500 Rhododendron simsii HOM05D005035 ORTHO05D006141 3.2e-27 125.6 64 85.9
C04p46660 Brassica napus HOM05D005035 ORTHO05D006141 1.6e-26 123.2 61 83.6
BcaB02g11482 Brassica carinata HOM05D005035 ORTHO05D006141 2.2e-20 102.8 62 69.4
BcaC04g21225 Brassica carinata HOM05D005035 ORTHO05D006141 2.4e-19 99.4 52 86.5
Oeu031509.1 Olea europaea HOM05D005035 ORTHO05D006141 7.0e-19 97.8 308 28.9
vmacro18227 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 1.3e-17 93.6 74 71.6
CSS0035672 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 3.6e-15 85.5 52 71.2
QL02p078176 Quercus lobata HOM05D005035 ORTHO05D006141 8.1e-15 84.3 57 75.4
Nn1g06334 Nelumbo nucifera HOM05D005035 ORTHO05D006141 8.3e-12 74.3 38 94.7
CSS0048463 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 5.4e-11 71.6 49 69.4
CSS0020716 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.1e-10 69.7 40 72.5
CARHR102660 Cardamine hirsuta HOM05D005035 ORTHO05D006141 4.6e-10 68.6 42 71.4
Dinv33674 Davidia involucrata HOM05D005035 ORTHO05D006141 1.5e-08 63.5 46 69.6
CSS0011814 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.1e-07 59.7 30 76.7
Nn3g18376 Nelumbo nucifera HOM05D005035 ORTHO05D006141 3.1e-06 55.8 47 57.4


User provided reference genes

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