Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR476G0003 Trochodendron aralioides HOM05D004020 ORTHO05D004735 1.4e-67 259.6 138 100.0
TAR633G0695 Trochodendron aralioides HOM05D004020 ORTHO05D004735 6.9e-64 247.3 131 100.0
Nn2g13902 Nelumbo nucifera HOM05D004020 ORTHO05D004735 2.0e-47 192.6 131 80.2
CsaV3_1G014440 Cucumis sativus L. HOM05D004020 ORTHO05D004735 1.3e-46 189.9 131 77.9
CSS0033419 Camellia sinensis var. sinensis HOM05D004020 ORTHO05D004735 2.9e-46 188.7 133 78.9
Cfa010130 Carpinus fangiana HOM05D004020 ORTHO05D004735 3.8e-46 188.3 131 76.3
Haze_23512 Corylus avellana HOM05D004020 ORTHO05D004735 3.8e-46 188.3 131 76.3
MELO3C004814.2 Cucumis melo HOM05D004020 ORTHO05D004735 1.1e-45 186.8 131 77.1
CiPaw.14G105600 Carya illinoinensis HOM05D004020 ORTHO05D004735 1.9e-45 186.0 131 76.3
ClCG01G012850 Citrullus lanatus HOM05D004020 ORTHO05D004735 2.5e-45 185.7 131 77.1
MD03G1129700 Malus domestica HOM05D004020 ORTHO05D004735 2.5e-45 185.7 133 75.2
Prupe.6G114700 Prunus persica HOM05D004020 ORTHO05D004735 2.5e-45 185.7 131 75.6
MD11G1151500 Malus domestica HOM05D004020 ORTHO05D004735 2.7e-44 182.2 131 74.0
Actinidia24157 Actinidia chinensis HOM05D004020 ORTHO05D004735 6.1e-44 181.0 132 77.3
Manes.11G154000 Manihot esculenta HOM05D004020 ORTHO05D004735 8.0e-44 180.6 134 73.9
PGR102G0426 Punica granatum HOM05D004020 ORTHO05D004735 1.0e-43 180.3 132 76.5
Lalb_Chr19g0136831 Lupinus albus HOM05D004020 ORTHO05D004735 3.0e-43 178.7 132 76.5
Actinidia07194 Actinidia chinensis HOM05D004020 ORTHO05D004735 8.8e-43 177.2 132 75.8
COL.COLO4_19229 Corchorus olitorius HOM05D004020 ORTHO05D004735 8.8e-43 177.2 140 74.3
Ciclev10027713m.g Citrus clementina HOM05D004020 ORTHO05D004735 1.5e-42 176.4 135 71.9
Duzib150G0506 Durio zibethinus HOM05D004020 ORTHO05D004735 2.0e-42 176.0 140 73.6
Glyma.11G191100 Glycine max HOM05D004020 ORTHO05D004735 2.6e-42 175.6 137 75.2
Sed0021294 Sechium edule HOM05D004020 ORTHO05D004735 5.7e-42 174.5 132 73.5
Thecc.09G295800 Theobroma cacao HOM05D004020 ORTHO05D004735 9.8e-42 173.7 140 72.9
Glyma.12G083200 Glycine max HOM05D004020 ORTHO05D004735 2.2e-41 172.6 137 74.5
Duzib168G0446 Durio zibethinus HOM05D004020 ORTHO05D004735 4.8e-41 171.4 140 70.7
Eucgr.B03912 Eucalyptus grandis HOM05D004020 ORTHO05D004735 1.4e-40 169.9 132 72.0
Atru.chr3.3492 Acer truncatum HOM05D004020 ORTHO05D004735 2.4e-40 169.1 132 72.7
Gorai.009G089000 Gossypium raimondii HOM05D004020 ORTHO05D004735 2.4e-40 169.1 136 69.1
Lj3g0000902 Lotus japonicus HOM05D004020 ORTHO05D004735 2.4e-40 169.1 141 70.9
MD01G1172900 Malus domestica HOM05D004020 ORTHO05D004735 3.1e-40 168.7 131 70.2
Ca_19329_v3 Cicer arietinum L. HOM05D004020 ORTHO05D004735 5.4e-40 167.9 136 73.5
Gohir.D07G110000 Gossypium hirsutum HOM05D004020 ORTHO05D004735 5.4e-40 167.9 136 71.3
Gorai.001G118200 Gossypium raimondii HOM05D004020 ORTHO05D004735 5.4e-40 167.9 136 71.3
TWI75G0197 Tripterygium wilfordii HOM05D004020 ORTHO05D004735 7.0e-40 167.5 136 72.1
Gohir.A07G106132 Gossypium hirsutum HOM05D004020 ORTHO05D004735 9.1e-40 167.2 136 71.3
TPR.G35043 Trifolium pratense HOM05D004020 ORTHO05D004735 1.6e-39 166.4 134 69.4
Psat7g191400 Pisum sativum HOM05D004020 ORTHO05D004735 2.0e-39 166.0 134 70.9
Lalb_Chr01g0004661 Lupinus albus HOM05D004020 ORTHO05D004735 2.7e-39 165.6 122 76.2
Sopen11g026290 Solanum pennellii HOM05D004020 ORTHO05D004735 1.3e-38 163.3 134 73.9
RcHm_v2.0_Chr5g0056331 Rosa chinensis HOM05D004020 ORTHO05D004735 2.2e-38 162.5 134 70.9
Rhsim13G0102300 Rhododendron simsii HOM05D004020 ORTHO05D004735 2.9e-38 162.2 136 71.3
Sc06g0008980 Simmondsia chinensis HOM05D004020 ORTHO05D004735 2.9e-38 162.2 122 74.6
BcaB01g03084 Brassica carinata HOM05D004020 ORTHO05D004735 6.5e-38 161.0 135 71.1
Potri.001G212600 Populus trichocarpa HOM05D004020 ORTHO05D004735 8.5e-38 160.6 143 65.0
Sabra04G0148500 Salix brachista HOM05D004020 ORTHO05D004735 1.1e-37 160.2 143 64.3
Potri.009G002900 Populus trichocarpa HOM05D004020 ORTHO05D004735 3.2e-37 158.7 147 63.3
Aa31LG5G8160 Aethionema arabicum HOM05D004020 ORTHO05D004735 4.2e-37 158.3 138 67.4
Nitab4.5_0000173g0340 Nicotiana tabacum HOM05D004020 ORTHO05D004735 4.2e-37 158.3 148 69.6
Hund00854 Selenicereus undatus HOM05D004020 ORTHO05D004735 1.2e-36 156.8 139 68.3
FAN11G0203 Fragaria x ananassa HOM05D004020 ORTHO05D004735 8.0e-36 154.1 136 69.1
FAN11G1674 Fragaria x ananassa HOM05D004020 ORTHO05D004735 8.0e-36 154.1 136 69.1
FAN21G0688 Fragaria x ananassa HOM05D004020 ORTHO05D004735 8.0e-36 154.1 136 69.1
FAN21G0469 Fragaria x ananassa HOM05D004020 ORTHO05D004735 1.8e-35 152.9 136 68.4
Medtr4g056510 Medicago truncatula HOM05D004020 ORTHO05D004735 1.8e-35 152.9 136 68.4
Phvul.011G088000 Phaseolus vulgaris HOM05D004020 ORTHO05D004735 1.8e-35 152.9 133 65.4
FvH4_3g30380 Fragaria vesca HOM05D004020 ORTHO05D004735 4.0e-35 151.8 136 68.4
EL10Ac9g20998 Beta vulgaris HOM05D004020 ORTHO05D004735 5.2e-35 151.4 136 68.4
Peaxi162Scf00150g00916 Petunia axillaris HOM05D004020 ORTHO05D004735 6.8e-35 151.0 148 69.6
A03p26460 Brassica napus HOM05D004020 ORTHO05D004735 1.2e-34 150.2 140 65.0
C03p31750 Brassica napus HOM05D004020 ORTHO05D004735 9.8e-34 147.1 138 64.5
THA.LOC104826398 Tarenaya hassleriana HOM05D004020 ORTHO05D004735 1.3e-33 146.7 138 65.9
AL4G22350 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 1.7e-33 146.4 141 65.2
Lsat_1_v5_gn_6_42101 Lactuca sativa HOM05D004020 ORTHO05D004735 2.2e-33 146.0 139 65.5
BraA03t11860Z Brassica rapa HOM05D004020 ORTHO05D004735 3.7e-33 145.2 142 62.7
PSO339G0247 Papaver somniferum HOM05D004020 ORTHO05D004735 6.3e-33 144.4 89 85.4
PSO801G0568 Papaver somniferum HOM05D004020 ORTHO05D004735 6.3e-33 144.4 89 85.4
AUR62024038 Chenopodium quinoa HOM05D004020 ORTHO05D004735 8.3e-33 144.1 144 63.2
CANSAT64G0934 Cannabis sativa HOM05D004020 ORTHO05D004735 1.4e-32 143.3 139 61.2
Carub.0004s0864 Capsella rubella HOM05D004020 ORTHO05D004735 1.4e-32 143.3 134 65.7
MSTRG.18711 Avicennia marina HOM05D004020 ORTHO05D004735 2.4e-32 142.5 108 75.9
Lsat_1_v5_gn_2_99000 Lactuca sativa HOM05D004020 ORTHO05D004735 2.4e-32 142.5 140 62.9
CAN.G644.49 Capsicum annuum HOM05D004020 ORTHO05D004735 3.1e-32 142.1 152 64.5
Lj2A1002G13 Lonicera japonica HOM05D004020 ORTHO05D004735 4.1e-32 141.7 87 86.2
GSVIVG01031444001 Vitis vinifera HOM05D004020 ORTHO05D004735 4.1e-32 141.7 87 87.4
AT2G27900 Arabidopsis thaliana HOM05D004020 ORTHO05D004735 7.0e-32 141.0 134 65.7
BcaC01g04955 Brassica carinata HOM05D004020 ORTHO05D004735 2.0e-31 139.4 140 61.4
BolC3t15517H Brassica oleracea HOM05D004020 ORTHO05D004735 2.0e-31 139.4 140 61.4
THA.LOC104800567 Tarenaya hassleriana HOM05D004020 ORTHO05D004735 2.0e-31 139.4 140 63.6
HPP92_022569 Vanilla planifolia HOM05D004020 ORTHO05D004735 1.0e-30 137.1 112 67.0
Gohir.A05G084400 Gossypium hirsutum HOM05D004020 ORTHO05D004735 1.7e-30 136.3 136 58.1
Aqoxy2G01562 Aquilegia oxysepala HOM05D004020 ORTHO05D004735 2.9e-30 135.6 87 81.6
Gohir.D05G087200 Gossypium hirsutum HOM05D004020 ORTHO05D004735 3.8e-30 135.2 136 57.4
Zm00001eb302500 Zea mays HOM05D004020 ORTHO05D004735 5.0e-30 134.8 131 58.0
CDE08G1223 Ceratophyllum demersum HOM05D004020 ORTHO05D004735 6.6e-30 134.4 87 79.3
HanXRQChr14g0451831 Helianthus annuus HOM05D004020 ORTHO05D004735 6.6e-30 134.4 143 57.3
Cc01_g10110 Coffea canephora HOM05D004020 ORTHO05D004735 1.5e-29 133.3 87 81.6
FAN16G3550 Fragaria x ananassa HOM05D004020 ORTHO05D004735 2.5e-29 132.5 91 82.4
ECA238G2607 Erigeron canadensis HOM05D004020 ORTHO05D004735 1.6e-28 129.8 88 76.1
unitig_746.g26604 Utricularia gibba HOM05D004020 ORTHO05D004735 4.7e-28 128.3 108 68.5
HanXRQChr02g0055251 Helianthus annuus HOM05D004020 ORTHO05D004735 1.0e-27 127.1 138 57.2
AUR62041305 Chenopodium quinoa HOM05D004020 ORTHO05D004735 1.4e-27 126.7 87 80.5
Oeu007301.5 Olea europaea HOM05D004020 ORTHO05D004735 2.3e-27 125.9 198 48.0
Dinv12567 Davidia involucrata HOM05D004020 ORTHO05D004735 8.9e-27 124.0 131 57.3
ATR1158G033 Amborella trichopoda HOM05D004020 ORTHO05D004735 1.2e-26 123.6 88 75.0
SGA_v2.0_scaffold27G11582 Striga asiatica HOM05D004020 ORTHO05D004735 1.5e-26 123.2 134 59.7
Thhalv10016162m.g Eutrema salsugineum HOM05D004020 ORTHO05D004735 3.4e-26 122.1 144 56.2
arahy.Tifrunner.gnm1.ann1.533Y7U Arachis hypogaea HOM05D004020 ORTHO05D004735 1.3e-25 120.2 130 56.9
arahy.Tifrunner.gnm1.ann1.MMVL4X Arachis hypogaea HOM05D004020 ORTHO05D004735 1.7e-25 119.8 130 56.9
Sp4g10720 Schrenkiella parvula HOM05D004020 ORTHO05D004735 3.7e-25 118.6 144 54.9
vmacro03245 Vaccinium macrocarpon HOM05D004020 ORTHO05D004735 9.2e-24 114.0 135 57.0
Migut.D02305 Erythranthe guttata HOM05D004020 ORTHO05D004735 1.2e-23 113.6 114 61.4
Zm00001eb022740 Zea mays HOM05D004020 ORTHO05D004735 2.7e-23 112.5 110 60.0
AL580U10010 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 3.5e-23 112.1 89 73.0
SEGI_13700 Sequoiadendron giganteum HOM05D004020 ORTHO05D004735 3.5e-23 112.1 87 72.4
Os10g0546300 Oryza sativa ssp. japonica HOM05D004020 ORTHO05D004735 1.0e-22 110.5 108 56.5
DCAR_031639 Daucus carota HOM05D004020 ORTHO05D004735 1.3e-22 110.2 87 71.3
AL4G12830 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 2.9e-22 109.0 90 70.0
A04p21190 Brassica napus HOM05D004020 ORTHO05D004735 3.9e-22 108.6 92 69.6
BcaC02g08224 Brassica carinata HOM05D004020 ORTHO05D004735 6.6e-22 107.8 94 68.1
C04p57020 Brassica napus HOM05D004020 ORTHO05D004735 6.6e-22 107.8 94 68.1
BolC4t27237H Brassica oleracea HOM05D004020 ORTHO05D004735 8.6e-22 107.5 93 68.8
BraA04t17688Z Brassica rapa HOM05D004020 ORTHO05D004735 8.6e-22 107.5 92 68.5
MBI18_g10967_MAGBIO Magnolia biondii HOM05D004020 ORTHO05D004735 1.0e-19 100.5 64 84.4
Zm00001eb064060 Zea mays HOM05D002996 ORTHO05D003536 1.8e-19 99.8 87 64.4
BcaB06g28175 Brassica carinata HOM05D004020 ORTHO05D004735 2.6e-18 95.9 82 69.5
Mapoly0001s0255 Marchantia polymorpha HOM05D004020 ORTHO05D004735 2.6e-18 95.9 73 69.9
Hund07762 Selenicereus undatus HOM05D004020 ORTHO05D004735 8.6e-14 80.9 80 60.0
SHI06173 Sapria himalayana HOM05D004020 ORTHO05D003975 9.5e-13 77.4 62 66.1
Zm00001eb218380 Zea mays HOM05D002996 ORTHO05D003536 2.8e-12 75.9 59 64.4
Pp3c5_16860 Physcomitrium patens HOM05D004020 ORTHO05D004735 8.1e-12 74.3 86 55.8
SMO118G0476 Selaginella moellendorffii HOM05D004020 ORTHO05D004735 2.6e-10 69.3 88 47.7
Pp3c16_8720 Physcomitrium patens HOM05D004020 ORTHO05D004735 2.9e-09 65.9 85 51.8
Oeu008367.3 Olea europaea HOM05D004020 ORTHO05D004735 4.6e-07 58.5 32 93.8


User provided reference genes

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