Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 6.6e-67 257.3 135 100.0
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 6.6e-67 257.3 135 100.0
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 5.0e-51 204.5 131 80.9
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 2.1e-49 199.1 137 75.9
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 1.8e-48 196.1 131 78.6
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 2.0e-47 192.6 132 75.0
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 3.4e-47 191.8 123 78.9
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 2.2e-46 189.1 123 77.2
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 8.3e-46 187.2 127 77.2
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 1.1e-45 186.8 128 78.9
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 1.1e-45 186.8 123 77.2
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 1.4e-45 186.4 118 79.7
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 1.9e-45 186.0 130 78.5
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 9.2e-45 183.7 129 76.7
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 9.2e-45 183.7 120 75.8
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 1.2e-44 183.3 123 75.6
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 2.7e-44 182.2 133 69.9
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 3.5e-44 181.8 123 74.0
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 6.0e-44 181.0 133 69.9
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 1.0e-43 180.3 132 68.2
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 3.0e-43 178.7 118 75.4
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 3.0e-43 178.7 135 68.1
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 3.0e-43 178.7 133 69.2
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 3.9e-43 178.3 138 71.0
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 5.1e-43 177.9 130 69.2
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 5.1e-43 177.9 129 72.9
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 5.1e-43 177.9 129 72.9
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 5.1e-43 177.9 131 68.7
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 6.6e-43 177.6 133 70.7
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 6.6e-43 177.6 133 75.2
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.1e-42 176.8 129 72.1
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 1.1e-42 176.8 139 70.5
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 1.9e-42 176.0 127 74.0
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 3.3e-42 175.3 133 67.7
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 3.3e-42 175.3 117 76.9
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 4.3e-42 174.9 134 69.4
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 4.3e-42 174.9 136 67.6
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 5.6e-42 174.5 122 73.0
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 5.6e-42 174.5 120 73.3
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 1.2e-41 173.3 125 74.4
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.6e-41 172.9 127 73.2
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 2.1e-41 172.6 135 69.6
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 2.8e-41 172.2 130 69.2
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 4.7e-41 171.4 125 73.6
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 1.8e-40 169.5 114 73.7
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 2.3e-40 169.1 117 72.6
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 6.8e-40 167.5 114 72.8
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 6.8e-40 167.5 117 71.8
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 1.2e-39 166.8 123 71.5
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.2e-39 166.8 122 68.9
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 1.5e-39 166.4 122 72.1
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 1.5e-39 166.4 133 66.9
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 2.6e-39 165.6 127 68.5
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 5.8e-39 164.5 122 68.9
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.3e-38 163.3 118 71.2
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.7e-38 162.9 140 65.0
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 2.9e-38 162.2 129 64.3
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 3.8e-38 161.8 133 65.4
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 6.4e-38 161.0 135 65.2
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 6.4e-38 161.0 118 68.6
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 6.4e-38 161.0 118 68.6
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 8.4e-38 160.6 118 68.6
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 8.4e-38 160.6 118 68.6
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 8.4e-38 160.6 118 68.6
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 8.4e-38 160.6 115 71.3
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 1.9e-37 159.5 161 57.8
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 2.4e-37 159.1 134 66.4
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 3.2e-37 158.7 135 65.2
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 7.1e-37 157.5 119 68.1
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 2.1e-36 156.0 133 61.7
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 1.0e-35 153.7 133 61.7
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 1.0e-35 153.7 132 61.4
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 2.3e-35 152.5 133 61.7
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 6.6e-35 151.0 131 65.6
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 8.6e-35 150.6 133 57.9
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.9e-34 149.4 126 59.5
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 2.5e-34 149.1 144 56.2
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 5.6e-34 147.9 126 61.9
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 2.1e-33 146.0 120 63.3
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 4.7e-33 144.8 125 60.8
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 6.2e-33 144.4 162 51.9
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 1.8e-32 142.9 113 61.9
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 6.9e-32 141.0 91 75.8
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 6.9e-32 141.0 113 61.9
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 1.2e-31 140.2 113 61.1
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 1.5e-31 139.8 132 56.1
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 2.6e-31 139.0 130 56.9
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 2.6e-31 139.0 116 62.1
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 1.7e-30 136.3 113 60.2
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 2.9e-30 135.6 121 60.3
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 3.8e-30 135.2 89 78.7
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 4.9e-30 134.8 122 57.4
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 6.4e-30 134.4 81 81.5
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 8.4e-30 134.0 83 80.7
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.1e-29 133.7 126 57.1
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 1.4e-29 133.3 126 57.1
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 3.2e-29 132.1 90 72.2
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 5.4e-29 131.3 127 58.3
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.1e-28 129.4 93 69.9
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.5e-28 128.6 93 69.9
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.5e-28 128.6 93 69.9
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 7.3e-26 120.9 84 73.8
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 1.1e-24 117.1 117 57.3
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 1.8e-24 116.3 131 51.9
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 6.4e-22 107.8 97 60.8
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 6.4e-22 107.8 73 71.2
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 8.4e-22 107.5 81 67.9
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 4.2e-21 105.1 115 48.7
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 3.6e-17 92.0 77 63.6
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 1.8e-16 89.7 67 64.2
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 1.7e-14 83.2 99 46.5
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 6.0e-12 74.7 114 38.6
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 5.6e-10 68.2 89 49.4
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 7.4e-10 67.8 55 65.5
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 9.6e-10 67.4 91 45.1
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 1.1e-08 63.9 39 79.5
ECA246G4512 Erigeron canadensis HOM05D007880 ORTHO05D003386 2.2e-06 56.2 58 53.4


User provided reference genes

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