Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 2.9e-213 745.0 384 100.0
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 8.3e-107 391.3 328 65.5
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 8.3e-107 391.3 328 65.5
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 1.1e-106 391.0 329 65.7
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 2.4e-106 389.8 328 65.2
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 9.2e-106 387.9 328 64.9
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 9.2e-106 387.9 329 64.1
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 9.5e-103 377.9 329 62.6
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 2.1e-102 376.7 329 64.4
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 2.8e-102 376.3 327 63.6
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 4.7e-102 375.6 329 62.9
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 3.0e-101 372.9 327 63.0
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 1.2e-100 370.9 326 63.5
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 7.5e-100 368.2 329 62.6
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 4.9e-99 365.5 332 64.5
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 1.4e-98 364.0 329 62.6
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 9.5e-95 351.3 329 59.9
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 2.8e-94 349.7 329 59.9
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 3.6e-94 349.4 329 59.6
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 6.2e-94 348.6 329 59.3
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 6.2e-94 348.6 329 58.4
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 2.3e-93 346.7 329 60.2
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 5.2e-93 345.5 327 60.6
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 7.5e-92 341.7 328 59.5
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 1.7e-91 340.5 329 58.7
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 4.9e-91 339.0 329 57.4
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 5.4e-90 335.5 329 58.7
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 1.2e-89 334.3 326 55.8
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 6.0e-89 332.0 327 57.8
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 7.8e-89 331.6 328 57.0
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 1.3e-88 330.9 331 56.5
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 5.0e-88 328.9 329 58.4
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 1.5e-87 327.4 331 55.9
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 1.9e-87 327.0 327 57.5
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 2.5e-87 326.6 328 58.2
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 2.5e-87 326.6 327 57.5
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 3.3e-87 326.2 329 57.1
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 5.6e-87 325.5 330 57.6
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 1.2e-86 324.3 335 58.8
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 6.2e-86 322.0 328 58.2
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 1.8e-85 320.5 324 56.2
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 2.3e-85 320.1 329 56.5
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 3.1e-85 319.7 330 55.8
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 8.9e-85 318.2 329 55.0
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 1.5e-84 317.4 328 57.0
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 1.5e-84 317.4 327 56.0
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 2.0e-84 317.0 329 55.0
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 3.4e-84 316.2 329 54.1
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 9.8e-84 314.7 337 55.8
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.3e-83 314.3 329 56.8
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 1.7e-83 313.9 329 56.8
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.7e-83 313.9 329 56.8
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 2.2e-83 313.5 330 55.8
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 2.2e-83 313.5 330 55.2
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 3.7e-83 312.8 331 56.8
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 3.7e-83 312.8 329 57.1
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 4.9e-83 312.4 329 56.8
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 1.9e-82 310.5 326 55.2
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 2.4e-82 310.1 330 55.8
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 2.4e-82 310.1 329 54.4
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.6e-81 307.4 341 55.4
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.1e-81 307.0 341 55.1
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 2.1e-81 307.0 369 51.8
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 2.1e-81 307.0 329 54.7
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 7.8e-81 305.1 330 55.5
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 1.7e-80 303.9 337 55.5
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 3.0e-80 303.1 329 54.4
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 1.9e-79 300.4 323 54.5
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 1.1e-77 294.7 329 52.3
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 2.3e-77 293.5 329 52.0
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 4.0e-77 292.7 330 51.8
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 2.6e-76 290.0 269 60.2
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 4.4e-76 289.3 333 51.1
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 7.6e-76 288.5 335 52.2
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 1.7e-75 287.3 332 52.4
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 2.2e-75 287.0 329 52.0
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 2.9e-75 286.6 331 51.7
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 1.1e-74 284.6 329 51.7
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 1.1e-74 284.6 330 51.8
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 9.2e-74 281.6 325 52.3
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 2.7e-73 280.0 330 52.4
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 4.6e-73 279.3 329 52.0
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 1.0e-72 278.1 308 55.5
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 1.5e-71 274.2 332 50.9
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 2.5e-71 273.5 329 49.8
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 1.6e-70 270.8 329 49.2
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 4.7e-70 269.2 333 48.0
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 8.1e-70 268.5 328 51.8
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 1.1e-69 268.1 329 50.2
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 4.0e-69 266.2 405 44.0
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 2.2e-67 260.4 329 50.2
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 2.2e-67 260.4 329 50.2
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 3.8e-67 259.6 330 50.0
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 4.9e-67 259.2 330 50.3
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 1.9e-66 257.3 329 49.5
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 1.2e-65 254.6 326 47.2
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 1.7e-64 250.8 330 49.4
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 8.7e-64 248.4 336 46.4
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 1.1e-63 248.1 335 46.3
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 3.3e-63 246.5 155 76.8
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 3.3e-63 246.5 334 47.0
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 1.0e-56 224.9 330 45.2
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 1.1e-53 214.9 328 42.4
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 1.6e-38 164.5 170 51.8
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 5.3e-37 159.5 325 36.0
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 6.9e-37 159.1 321 38.3
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 7.6e-36 155.6 335 33.1
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 1.7e-35 154.5 270 44.8
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 3.8e-35 153.3 156 50.6
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 1.2e-33 148.3 265 38.5
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 6.7e-32 142.5 324 34.9
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.5e-31 141.4 196 43.9
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 6.5e-27 125.9 333 32.7
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 1.1e-23 115.2 132 45.5
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 1.5e-23 114.8 363 29.2
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 2.6e-23 114.0 248 37.9
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 5.7e-23 112.8 124 43.5
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 6.3e-22 109.4 139 49.6
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 6.3e-22 109.4 163 42.9
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.1e-21 108.6 248 37.1
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 1.0e-19 102.1 134 40.3
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 6.1e-17 92.8 53 71.7
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 1.8e-16 91.3 53 69.8
Actinidia25232 Actinidia chinensis HOM05D006355 ORTHO05D008284 3.2e-10 70.5 122 41.8
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 1.8e-08 64.7 42 73.8
TAR626G0571 Trochodendron aralioides HOM05D006355 ORTHO05D414654 1.8e-08 64.7 44 75.0


User provided reference genes

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