Gene: AT2G19385

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G19385
  • Transcript Identifier AT2G19385.1
  • Gene Type Coding gene
  • Location Chr2 : 8387149-8388581 : positive

Gene Family Information

  • ID HOM05D006355
  • #Genes/#Species 125/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G19385.1
  • uniprot Q8S8S8

Descriptions

  • Description zinc ion binding protein
  • Computational description zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2, LYAR-type (InterPro:IPR014898); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT2G19380.1); Has 578 Blast hits to 525 proteins in 182 species: Archae - 0; Bacteria - 8; Metazoa - 240; Fungi - 111; Plants - 79; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000122
IBA
Gene Ontologynegative regulation of transcription by RNA polymerase II1
GO:0006364
IBA
Gene OntologyrRNA processing1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IBA
Gene OntologyDNA binding1
GO:0003677
IEA
InterProDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005730
IBA
Gene Ontologynucleolus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
IPR036236 Zinc finger C2H2 superfamily
IPR039999 Cell growth-regulating nucleolar protein
IPR014898 Zinc finger, C2H2, LYAR-type
Mapman id Description
35.1 not assigned.annotated