Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR406G0002 Trochodendron aralioides HOM05D003159 ORTHO05D003780 4.8e-52 207.6 108 100.0
TAR362G0530 Trochodendron aralioides HOM05D003159 ORTHO05D003780 4.8e-12 74.7 69 59.4
Nn3g19572 Nelumbo nucifera HOM05D003159 ORTHO05D003780 6.3e-12 74.3 67 62.7
Manes.15G108700 Manihot esculenta HOM05D003159 ORTHO05D003780 7.0e-11 70.9 69 59.4
Cpa.g.sc162.4 Carica papaya HOM05D003159 ORTHO05D003780 1.2e-10 70.1 69 58.0
Duzib128G1665 Durio zibethinus HOM05D003159 ORTHO05D003780 1.2e-10 70.1 69 58.0
vmacro19526 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 1.6e-10 69.7 67 59.7
vmacro20008 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 1.6e-10 69.7 67 59.7
Eucgr.J00270 Eucalyptus grandis HOM05D003159 ORTHO05D003780 2.0e-10 69.3 82 52.4
Potri.013G043500 Populus trichocarpa HOM05D003159 ORTHO05D003780 2.0e-10 69.3 69 59.4
GSVIVG01036258001 Vitis vinifera HOM05D003159 ORTHO05D003780 2.0e-10 69.3 69 58.0
Gohir.A09G017500 Gossypium hirsutum HOM05D003159 ORTHO05D003780 2.6e-10 68.9 67 58.2
Gohir.D13G031700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 2.6e-10 68.9 67 58.2
Gorai.013G036100 Gossypium raimondii HOM05D003159 ORTHO05D003780 2.6e-10 68.9 67 58.2
CANSAT54G0311 Cannabis sativa HOM05D003159 ORTHO05D003780 3.5e-10 68.6 69 58.0
Gohir.D11G260700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 3.5e-10 68.6 67 56.7
Gorai.007G279300 Gossypium raimondii HOM05D003159 ORTHO05D003780 3.5e-10 68.6 67 56.7
Prupe.6G346800 Prunus persica HOM05D003159 ORTHO05D003780 3.5e-10 68.6 69 56.5
Sabra19G0017400 Salix brachista HOM05D003159 ORTHO05D003780 3.5e-10 68.6 69 58.0
Sabra19G0025200 Salix brachista HOM05D003159 ORTHO05D003780 3.5e-10 68.6 69 58.0
Sabra19G0025400 Salix brachista HOM05D003159 ORTHO05D003780 3.5e-10 68.6 69 58.0
Ciclev10027983m.g Citrus clementina HOM05D003159 ORTHO05D003780 4.5e-10 68.2 67 58.2
DCAR_028953 Daucus carota HOM05D003159 ORTHO05D003780 4.5e-10 68.2 67 58.2
MD12G1244300 Malus domestica HOM05D003159 ORTHO05D003780 4.5e-10 68.2 69 56.5
QL01p030114 Quercus lobata HOM05D003159 ORTHO05D003780 4.5e-10 68.2 68 55.9
QL07p003261 Quercus lobata HOM05D003159 ORTHO05D003780 4.5e-10 68.2 68 55.9
Sabra19G0025600 Salix brachista HOM05D003159 ORTHO05D003780 4.5e-10 68.2 69 58.0
Haze_04383 Corylus avellana HOM05D003159 ORTHO05D003780 5.9e-10 67.8 67 58.2
Potri.019G012300 Populus trichocarpa HOM05D003159 ORTHO05D003780 5.9e-10 67.8 69 58.0
COL.COLO4_15406 Corchorus olitorius HOM05D003159 ORTHO05D003780 7.7e-10 67.4 69 55.1
Sabra19G0025000 Salix brachista HOM05D003159 ORTHO05D003780 7.7e-10 67.4 68 57.4
MD04G1227600 Malus domestica HOM05D003159 ORTHO05D003780 1.0e-09 67.0 69 55.1
Rhsim01G0186900 Rhododendron simsii HOM05D003159 ORTHO05D003780 1.0e-09 67.0 75 54.7
Sabra19G0024900 Salix brachista HOM05D003159 ORTHO05D003780 1.0e-09 67.0 69 56.5
Sabra19G0025900 Salix brachista HOM05D003159 ORTHO05D003780 1.3e-09 66.6 69 56.5
Thecc.05G277700 Theobroma cacao HOM05D003159 ORTHO05D003780 1.3e-09 66.6 67 55.2
Carub.0004s1964 Capsella rubella HOM05D003159 ORTHO05D003780 2.2e-09 65.9 67 55.2
SGA_v2.0_scaffold4G01959 Striga asiatica HOM05D003159 ORTHO05D003780 2.2e-09 65.9 67 53.7
Aqoxy6G02795 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 2.9e-09 65.5 67 56.7
Lj3C918G0 Lonicera japonica HOM05D003159 ORTHO05D003780 2.9e-09 65.5 69 56.5
CiPaw.08G119500 Carya illinoinensis HOM05D003159 ORTHO05D003780 3.8e-09 65.1 69 55.1
Oeu054532.1 Olea europaea HOM05D003159 ORTHO05D003780 5.0e-09 64.7 67 52.2
SalBow8G0718 Salvia bowleyana HOM05D003159 ORTHO05D003780 5.0e-09 64.7 67 53.7
BcaB01g03763 Brassica carinata HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 53.7
BcaC01g05601 Brassica carinata HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 53.7
BcaC02g07498 Brassica carinata HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 53.7
A03p20800 Brassica napus HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 53.7
A04p28880 Brassica napus HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 53.7
C03p24440 Brassica napus HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 53.7
C04p66140 Brassica napus HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 53.7
BraA03t11320Z Brassica rapa HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 53.7
BraA04t18362Z Brassica rapa HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 53.7
Migut.F01579 Erythranthe guttata HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 52.2
Gorai.007G279200 Gossypium raimondii HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 55.2
Peaxi162Scf00120g00723 Petunia axillaris HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 52.2
Sp4g20070 Schrenkiella parvula HOM05D003159 ORTHO05D003780 8.5e-09 63.9 67 53.7
Actinidia06777 Actinidia chinensis HOM05D003159 ORTHO05D003780 1.1e-08 63.5 67 55.2
Lsat_1_v5_gn_9_121981 Lactuca sativa HOM05D003159 ORTHO05D003780 1.1e-08 63.5 66 56.1
PGR031G1742 Punica granatum HOM05D003159 ORTHO05D003780 1.1e-08 63.5 80 48.8
BcaB06g29020 Brassica carinata HOM05D003159 ORTHO05D003780 1.5e-08 63.2 67 53.7
HanXRQChr05g0152861 Helianthus annuus HOM05D003159 ORTHO05D003780 1.5e-08 63.2 67 55.2
Sc06g0010270 Simmondsia chinensis HOM05D003159 ORTHO05D003780 1.5e-08 63.2 67 55.2
AT2G37690 Arabidopsis thaliana HOM05D003159 ORTHO05D003780 1.9e-08 62.8 67 53.7
EL10Ac8g19239 Beta vulgaris HOM05D003159 ORTHO05D003780 2.5e-08 62.4 67 52.2
BolC4t28117H Brassica oleracea HOM05D003159 ORTHO05D003780 2.5e-08 62.4 67 52.2
CARHR131850 Cardamine hirsuta HOM05D003159 ORTHO05D003780 2.5e-08 62.4 67 52.2
ECA248G3699 Erigeron canadensis HOM05D003159 ORTHO05D003780 2.5e-08 62.4 67 55.2
AT2G05140 Arabidopsis thaliana HOM05D003159 ORTHO05D003780 3.2e-08 62.0 67 53.7
MSTRG.927 Avicennia marina HOM05D003159 ORTHO05D003780 3.2e-08 62.0 66 51.5
AL4G34620 Arabidopsis lyrata HOM05D003159 ORTHO05D003780 4.2e-08 61.6 67 53.7
FAN08G2202 Fragaria x ananassa HOM05D003159 ORTHO05D003780 4.2e-08 61.6 73 47.9
THA.LOC104808027 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 4.2e-08 61.6 67 50.7
Ah.09g228380 Amaranthus hybridus HOM05D003159 ORTHO05D003780 5.5e-08 61.2 67 50.7
Cc02_g09140 Coffea canephora HOM05D003159 ORTHO05D003780 7.2e-08 60.8 67 53.7
RcHm_v2.0_Chr3g0450361 Rosa chinensis HOM05D003159 ORTHO05D003780 7.2e-08 60.8 69 52.2
Glyma.10G163700 Glycine max HOM05D003159 ORTHO05D003780 9.4e-08 60.5 67 49.3
QL03p028499 Quercus lobata HOM05D003159 ORTHO05D003780 9.4e-08 60.5 68 51.5
Solyc11g006340.2 Solanum lycopersicum HOM05D003159 ORTHO05D003780 9.4e-08 60.5 67 50.7
Sopen11g002240 Solanum pennellii HOM05D003159 ORTHO05D003780 9.4e-08 60.5 67 50.7
PGSC0003DMG400000995 Solanum tuberosum HOM05D003159 ORTHO05D003780 9.4e-08 60.5 67 50.7
CAN.G143.64 Capsicum annuum HOM05D003159 ORTHO05D003780 1.2e-07 60.1 67 50.7
AUR62033998 Chenopodium quinoa HOM05D003159 ORTHO05D003780 1.2e-07 60.1 67 50.7
Lalb_Chr21g0311061 Lupinus albus HOM05D003159 ORTHO05D003780 1.2e-07 60.1 67 47.8
unitig_22.g5684 Utricularia gibba HOM05D003159 ORTHO05D003780 1.2e-07 60.1 65 55.4
Aa31LG8G11740 Aethionema arabicum HOM05D003159 ORTHO05D003780 1.6e-07 59.7 79 45.6
Cc06_g22420 Coffea canephora HOM05D003159 ORTHO05D003780 1.6e-07 59.7 65 52.3
CsaV3_2G033180 Cucumis sativus L. HOM05D003159 ORTHO05D003780 1.6e-07 59.7 63 54.0
Thhalv10016367m.g Eutrema salsugineum HOM05D003159 ORTHO05D003780 1.6e-07 59.7 67 49.3
Phvul.007G188800 Phaseolus vulgaris HOM05D003159 ORTHO05D003780 1.6e-07 59.7 66 50.0
Sed0018461 Sechium edule HOM05D003159 ORTHO05D003780 1.6e-07 59.7 63 54.0
Aqoxy4G01990 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 2.1e-07 59.3 67 52.2
FvH4_5g12790 Fragaria vesca HOM05D003159 ORTHO05D003780 2.1e-07 59.3 73 46.6
FAN18G4090 Fragaria x ananassa HOM05D003159 ORTHO05D003780 2.1e-07 59.3 73 46.6
Nitab4.5_0001781g0080 Nicotiana tabacum HOM05D003159 ORTHO05D003780 2.1e-07 59.3 67 50.7
Lj5g0023348 Lotus japonicus HOM05D003159 ORTHO05D003780 2.7e-07 58.9 66 50.0
MELO3C008089.2 Cucumis melo HOM05D003159 ORTHO05D003780 3.6e-07 58.5 63 52.4
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 3.6e-07 58.5 60 58.3
Glyma.20G226300 Glycine max HOM05D003159 ORTHO05D003780 4.7e-07 58.2 67 47.8
HanXRQChr04g0112121 Helianthus annuus HOM05D003159 ORTHO05D003780 4.7e-07 58.2 67 53.7
FAN18G4088 Fragaria x ananassa HOM05D003159 ORTHO05D003780 6.1e-07 57.8 73 46.6
Aa31sc70G90 Aethionema arabicum HOM05D003159 ORTHO05D003780 1.0e-06 57.0 67 47.8
CSS0035771 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 1.0e-06 57.0 59 59.3
TPR.G26626 Trifolium pratense HOM05D003159 ORTHO05D003780 1.4e-06 56.6 67 46.3
TPR.G33936 Trifolium pratense HOM05D003159 ORTHO05D003780 1.4e-06 56.6 67 46.3
Lalb_Chr06g0168161 Lupinus albus HOM05D003159 ORTHO05D003780 1.8e-06 56.2 67 44.8
Mapoly0046s0034 Marchantia polymorpha HOM05D003159 ORTHO05D003780 2.3e-06 55.8 66 48.5
HPP92_021777 Vanilla planifolia HOM05D003159 ORTHO05D003780 2.3e-06 55.8 69 47.8
ATR0111G007 Amborella trichopoda HOM05D003159 ORTHO05D003780 4.0e-06 55.1 63 49.2
BcaC04g20281 Brassica carinata HOM05D003159 ORTHO05D003780 4.0e-06 55.1 63 50.8
Medtr1g080500 Medicago truncatula HOM05D003159 ORTHO05D003780 6.7e-06 54.3 67 46.3
MBI12_g21500_MAGBIO Magnolia biondii HOM05D003159 ORTHO05D003780 8.8e-06 53.9 67 43.3


User provided reference genes

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