Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 3.1e-50 201.4 98 100.0
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 3.0e-37 158.3 84 89.3
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 8.8e-37 156.8 82 89.0
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 2.5e-36 155.2 84 86.9
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 5.7e-36 154.1 82 87.8
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 1.8e-34 149.1 89 80.9
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 2.4e-34 148.7 84 86.9
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 6.9e-34 147.1 84 86.9
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 6.9e-34 147.1 84 84.5
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 9.1e-34 146.7 85 88.2
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 9.1e-34 146.7 85 88.2
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 2.0e-33 145.6 86 86.0
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 2.0e-33 145.6 85 88.2
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 2.0e-33 145.6 84 86.9
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 4.5e-33 144.4 88 85.2
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 4.5e-33 144.4 87 86.2
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 5.9e-33 144.1 84 85.7
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 5.9e-33 144.1 84 85.7
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 7.7e-33 143.7 85 87.1
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 1.0e-32 143.3 84 86.9
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 1.3e-32 142.9 84 84.5
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 1.3e-32 142.9 84 84.5
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 1.7e-32 142.5 84 85.7
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 1.7e-32 142.5 84 84.5
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 2.9e-32 141.7 83 84.3
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 3.8e-32 141.4 84 83.3
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 3.8e-32 141.4 84 83.3
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 3.8e-32 141.4 84 83.3
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 6.5e-32 140.6 88 85.2
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 6.5e-32 140.6 84 83.3
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 8.5e-32 140.2 84 86.9
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 8.5e-32 140.2 85 84.7
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 8.5e-32 140.2 84 84.5
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 1.1e-31 139.8 84 85.7
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 1.4e-31 139.4 86 83.7
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 1.4e-31 139.4 86 83.7
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 1.9e-31 139.0 86 83.7
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 2.5e-31 138.7 89 79.8
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 4.2e-31 137.9 84 82.1
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 4.2e-31 137.9 84 83.3
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 4.2e-31 137.9 87 82.8
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 5.5e-31 137.5 84 82.1
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 5.5e-31 137.5 84 83.3
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 7.2e-31 137.1 90 81.1
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 7.2e-31 137.1 90 81.1
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 7.2e-31 137.1 90 81.1
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 7.2e-31 137.1 90 81.1
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 7.2e-31 137.1 86 82.6
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 7.2e-31 137.1 86 82.6
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 9.4e-31 136.7 84 82.1
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 9.4e-31 136.7 84 82.1
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 9.4e-31 136.7 84 79.8
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 1.2e-30 136.3 84 81.0
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 1.2e-30 136.3 94 75.5
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 1.6e-30 136.0 92 78.3
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.6e-30 136.0 87 81.6
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 2.7e-30 135.2 84 79.8
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.7e-30 135.2 91 78.0
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 3.6e-30 134.8 84 83.3
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 4.7e-30 134.4 84 79.8
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 4.7e-30 134.4 86 77.9
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 4.7e-30 134.4 86 80.2
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 4.7e-30 134.4 84 82.1
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 6.1e-30 134.0 84 78.6
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 6.1e-30 134.0 84 84.5
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 6.1e-30 134.0 84 78.6
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 7.9e-30 133.7 84 78.6
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.4e-29 132.9 84 78.6
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 1.8e-29 132.5 82 82.9
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 2.3e-29 132.1 88 78.4
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 2.3e-29 132.1 88 78.4
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 2.3e-29 132.1 87 77.0
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 2.3e-29 132.1 84 82.1
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 3.0e-29 131.7 88 78.4
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 3.0e-29 131.7 85 81.2
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 3.9e-29 131.3 82 82.9
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 3.9e-29 131.3 88 77.3
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 3.9e-29 131.3 83 83.1
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 3.9e-29 131.3 84 81.0
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 5.1e-29 131.0 84 78.6
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 8.8e-29 130.2 101 70.3
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 8.8e-29 130.2 84 77.4
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.1e-28 129.8 76 84.2
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 1.1e-28 129.8 81 82.7
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 1.5e-28 129.4 88 76.1
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 1.5e-28 129.4 86 79.1
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 1.5e-28 129.4 80 72.5
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 2.0e-28 129.0 88 75.0
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 2.0e-28 129.0 84 77.4
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 2.0e-28 129.0 87 78.2
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 2.6e-28 128.6 85 76.5
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 2.6e-28 128.6 85 76.5
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 2.6e-28 128.6 88 75.0
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 2.6e-28 128.6 88 77.3
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 2.6e-28 128.6 87 78.2
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 4.4e-28 127.9 82 81.7
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 5.7e-28 127.5 88 75.0
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 5.7e-28 127.5 88 75.0
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 5.7e-28 127.5 88 75.0
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 5.7e-28 127.5 88 75.0
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 5.7e-28 127.5 85 76.5
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 7.4e-28 127.1 88 73.9
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 7.4e-28 127.1 83 80.7
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 8.2e-27 123.6 85 76.5
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 8.2e-27 123.6 96 65.6
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 1.1e-26 123.2 85 74.1
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 1.8e-26 122.5 91 69.2
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 2.4e-26 122.1 79 78.5
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 2.0e-25 119.0 86 70.9
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 2.2e-24 115.5 100 59.0
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 2.5e-23 112.1 57 93.0
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 2.5e-23 112.1 54 98.1
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 7.2e-23 110.5 91 60.4
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 9.4e-23 110.2 98 53.1
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 1.6e-22 109.4 79 68.4
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 2.1e-22 109.0 78 73.1
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 4.0e-21 104.8 76 61.8
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 4.4e-20 101.3 87 60.9
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 1.3e-19 99.8 52 88.5
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 3.5e-17 91.7 90 47.8
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 4.0e-13 78.2 41 90.2
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 3.4e-12 75.1 41 87.8
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 4.8e-11 71.2 76 50.0
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 4.8e-11 71.2 75 42.7
FvH4_2g13931 Fragaria vesca HOM05D051764 ORTHO05D035649 3.2e-07 58.5 56 64.3
FvH4_5g19731 Fragaria vesca HOM05D005750 ORTHO05D035649 8.0e-06 53.9 52 65.4
Glyma.07G142100 Glycine max HOM05D005750 ORTHO05D007126 8.0e-06 53.9 39 69.2


User provided reference genes

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