Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 1.1e-269 932.6 438 100.0
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 1.3e-188 663.3 436 72.9
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 3.7e-188 661.8 428 73.4
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 3.0e-185 652.1 425 71.5
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 4.4e-181 638.3 426 73.5
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 1.7e-180 636.3 456 68.4
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 3.8e-180 635.2 403 76.2
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 4.9e-180 634.8 367 77.7
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 1.4e-179 633.3 430 68.4
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 2.7e-178 629.0 369 77.5
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 3.5e-178 628.6 367 76.6
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 1.0e-177 627.1 373 74.8
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 3.0e-177 625.5 445 68.3
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 3.9e-177 625.2 435 70.1
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 5.1e-177 624.8 420 69.0
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 6.6e-177 624.4 371 74.7
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 1.2e-175 620.2 369 76.7
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 1.6e-175 619.8 373 74.5
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 1.6e-175 619.8 473 63.0
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 1.1e-174 617.1 418 68.9
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 1.1e-174 617.1 374 74.1
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 1.4e-174 616.7 425 66.4
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 1.8e-174 616.3 371 74.1
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 5.3e-174 614.8 371 74.1
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 6.9e-174 614.4 375 73.1
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 1.5e-173 613.2 416 68.3
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 2.0e-173 612.8 371 75.5
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 2.0e-173 612.8 368 73.6
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 2.0e-173 612.8 370 74.9
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 9.9e-173 610.5 429 65.7
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 1.7e-172 609.8 371 74.4
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 1.7e-172 609.8 425 69.6
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 2.9e-172 609.0 367 73.8
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 4.9e-172 608.2 364 74.2
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 1.1e-171 607.1 403 69.2
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.9e-171 606.3 414 68.6
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 1.9e-171 606.3 394 69.0
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 5.4e-171 604.7 437 65.4
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 9.3e-171 604.0 410 68.8
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 1.2e-170 603.6 392 71.4
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 3.5e-170 602.1 434 65.2
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 7.8e-170 600.9 408 68.1
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 1.0e-169 600.5 448 64.5
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 3.0e-169 599.0 431 66.4
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.9e-169 598.6 424 66.3
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 5.1e-169 598.2 372 72.0
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 8.7e-169 597.4 370 72.2
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 1.5e-168 596.7 414 68.1
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 2.5e-168 595.9 367 73.6
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 3.3e-168 595.5 373 72.4
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.3e-168 595.5 424 66.5
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 5.6e-168 594.7 400 67.8
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 1.6e-167 593.2 379 71.2
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 1.6e-167 593.2 370 71.9
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 3.1e-166 589.0 434 64.5
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 6.4e-164 581.3 384 67.2
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 1.4e-163 580.1 388 68.6
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 4.2e-163 578.6 366 69.7
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 7.1e-163 577.8 368 71.2
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 1.8e-161 573.2 408 63.7
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 3.9e-161 572.0 386 66.8
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 1.1e-160 570.5 368 69.6
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.5e-160 570.1 366 68.6
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 7.4e-160 567.8 393 66.4
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 6.2e-159 564.7 374 68.4
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 2.4e-158 562.8 392 65.1
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 3.1e-158 562.4 328 80.2
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 5.3e-158 561.6 377 67.6
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 6.9e-158 561.2 372 68.8
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 9.0e-158 560.8 374 67.9
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 1.2e-157 560.5 383 66.6
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 1.2e-157 560.5 383 66.6
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 1.5e-157 560.1 347 74.9
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 1.5e-157 560.1 381 67.5
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 7.6e-157 557.8 368 67.7
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 3.8e-156 555.4 370 67.8
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 1.1e-155 553.9 427 61.1
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 4.2e-155 552.0 364 68.4
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 1.6e-154 550.1 378 66.4
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 2.7e-154 549.3 411 61.1
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 3.5e-154 548.9 383 66.6
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 1.5e-152 543.5 389 64.5
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 1.9e-152 543.1 370 67.6
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 7.4e-152 541.2 373 67.8
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 2.1e-151 539.7 403 64.3
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 3.7e-151 538.9 396 63.6
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 2.2e-148 529.6 432 60.2
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 1.4e-147 526.9 402 59.2
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 2.1e-146 523.1 351 67.5
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 4.6e-146 521.9 388 64.2
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 2.7e-138 496.1 293 76.1
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 7.9e-138 494.6 307 73.0
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 8.8e-137 491.1 322 68.9
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 2.2e-135 486.5 363 60.9
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.5e-133 480.3 306 69.9
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 5.9e-133 478.4 366 59.0
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 2.7e-130 469.5 371 57.7
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 3.6e-130 469.2 344 66.9
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 3.2e-123 446.0 417 48.7
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 9.4e-123 444.5 421 51.5
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.0e-121 441.0 417 48.0
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 1.2e-112 411.0 281 70.8
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 1.7e-108 397.1 425 45.2
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 7.2e-107 391.7 260 71.2
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 1.6e-106 390.6 226 79.6
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 1.7e-87 327.4 361 45.4
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 3.6e-82 309.7 390 44.6
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 2.4e-78 297.0 372 46.2
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 3.5e-77 293.1 241 62.2
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.5e-67 261.2 186 65.1
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 6.2e-58 229.2 467 31.0
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 6.9e-57 225.7 194 56.2
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 5.4e-54 216.1 236 44.9
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 6.4e-47 192.6 128 67.2
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.5e-35 154.8 102 65.7
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 5.9e-24 116.3 61 85.2
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 1.3e-23 115.2 90 62.2
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 2.5e-22 110.9 60 83.3
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 2.5e-22 110.9 204 33.3
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 6.7e-20 102.8 61 77.0
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 9.7e-19 99.0 86 51.2
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 3.2e-14 84.0 65 55.4
Gohir.A05G306101 Gossypium hirsutum HOM05D005508 ORTHO05D007994 1.6e-13 81.6 43 79.1
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 1.0e-12 79.0 51 68.6
Gohir.A06G077600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 8.2e-10 69.3 71 53.5
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 8.2e-10 69.3 49 57.1


User provided reference genes

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