Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0623 Trochodendron aralioides HOM05D004186 ORTHO05D415797 1.2e-106 389.8 184 100.0
Dinv42759 Davidia involucrata HOM05D004186 ORTHO05D006965 2.1e-36 156.4 92 80.4
Dinv43343 Davidia involucrata HOM05D004186 ORTHO05D006965 2.1e-36 156.4 92 80.4
Potri.018G096049 Populus trichocarpa HOM05D004186 ORTHO05D006965 5.3e-35 151.8 85 82.4
SGA_v2.0_scaffold69G23283 Striga asiatica HOM05D004186 ORTHO05D006965 6.9e-35 151.4 90 74.4
TAR636G1430 Trochodendron aralioides HOM05D004186 ORTHO05D006965 6.9e-35 151.4 92 77.2
Dinv41278 Davidia involucrata HOM05D004186 ORTHO05D006965 9.0e-35 151.0 91 76.9
TAR625G0733 Trochodendron aralioides HOM05D004186 ORTHO05D006965 9.0e-35 151.0 92 78.3
Oeu054233.2 Olea europaea HOM05D004186 ORTHO05D006965 1.5e-34 150.2 91 73.6
Sopen07g002760 Solanum pennellii HOM05D004186 ORTHO05D006965 1.5e-34 150.2 91 73.6
Solyc07g006650.4 Solanum lycopersicum HOM05D004186 ORTHO05D006965 2.0e-34 149.8 91 72.5
Cc06_g13640 Coffea canephora HOM05D004186 ORTHO05D006965 5.8e-34 148.3 86 75.6
Nn2g12639 Nelumbo nucifera HOM05D004186 ORTHO05D006965 7.6e-34 147.9 87 79.3
Manes.06G027600 Manihot esculenta HOM05D004186 ORTHO05D006965 2.2e-33 146.4 86 79.1
PSO063G2639 Papaver somniferum HOM05D004186 ORTHO05D006965 2.9e-33 146.0 91 73.6
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 3.8e-33 145.6 91 72.5
Migut.K00260 Erythranthe guttata HOM05D004186 ORTHO05D006965 5.0e-33 145.2 90 73.3
MD13G1265000 Malus domestica HOM05D004186 ORTHO05D006965 6.5e-33 144.8 92 77.2
RcHm_v2.0_Chr4g0403601 Rosa chinensis HOM05D004186 ORTHO05D006965 6.5e-33 144.8 91 73.6
SalBow6G2747 Salvia bowleyana HOM05D004186 ORTHO05D015971 8.4e-33 144.4 86 73.3
SalBow6G3740 Salvia bowleyana HOM05D004186 ORTHO05D006965 8.4e-33 144.4 86 73.3
MD16G1265900 Malus domestica HOM05D004186 ORTHO05D006965 1.9e-32 143.3 92 76.1
Duzib114G0309 Durio zibethinus HOM05D004186 ORTHO05D006965 3.2e-32 142.5 86 75.6
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla HOM05D004186 ORTHO05D006965 3.2e-32 142.5 87 79.3
FvH4_4g32520 Fragaria vesca HOM05D004186 ORTHO05D006965 5.5e-32 141.7 91 71.4
FAN07G2198 Fragaria x ananassa HOM05D004186 ORTHO05D006965 5.5e-32 141.7 91 71.4
FAN12G1387 Fragaria x ananassa HOM05D004186 ORTHO05D006965 5.5e-32 141.7 91 71.4
Gorai.009G296100 Gossypium raimondii HOM05D004186 ORTHO05D006965 7.2e-32 141.4 91 70.3
CsaV3_2G008080 Cucumis sativus L. HOM05D004186 ORTHO05D006965 9.3e-32 141.0 79 81.0
Migut.J01448 Erythranthe guttata HOM05D004186 ORTHO05D006965 9.3e-32 141.0 90 72.2
CiPaw.08G037900 Carya illinoinensis HOM05D004186 ORTHO05D006965 1.2e-31 140.6 86 75.6
Duzib034G0005 Durio zibethinus HOM05D004186 ORTHO05D006965 1.2e-31 140.6 86 74.4
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 1.6e-31 140.2 85 74.1
FAN22G1241 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.6e-31 140.2 86 74.4
Gohir.A05G280700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.6e-31 140.2 86 73.3
MELO3C004075.2 Cucumis melo HOM05D004186 ORTHO05D006965 2.1e-31 139.8 79 79.7
DCAR_017956 Daucus carota HOM05D004186 ORTHO05D006965 2.1e-31 139.8 85 77.6
Gohir.D05G282700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 3.5e-31 139.0 91 69.2
Sed0027081 Sechium edule HOM05D004186 ORTHO05D006965 3.5e-31 139.0 85 75.3
ClCG11G012460 Citrullus lanatus HOM05D004186 ORTHO05D006965 4.6e-31 138.7 79 79.7
Os07g0669100 Oryza sativa ssp. japonica HOM05D004186 ORTHO05D006965 4.6e-31 138.7 86 75.6
Nitab4.5_0001212g0070 Nicotiana tabacum HOM05D004186 ORTHO05D006965 6.1e-31 138.3 72 83.3
QL02p096850 Quercus lobata HOM05D004186 ORTHO05D006965 6.1e-31 138.3 91 70.3
THA.LOC104813530 Tarenaya hassleriana HOM05D004186 ORTHO05D006965 6.1e-31 138.3 86 74.4
TWI32G0580 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 6.1e-31 138.3 79 81.0
ECA236G4107 Erigeron canadensis HOM05D004186 ORTHO05D006965 1.0e-30 137.5 81 77.8
Nitab4.5_0000244g0180 Nicotiana tabacum HOM05D004186 ORTHO05D006965 1.0e-30 137.5 70 87.1
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 1.3e-30 137.1 85 74.1
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 1.3e-30 137.1 85 74.1
PGSC0003DMG400027477 Solanum tuberosum HOM05D004186 ORTHO05D006965 1.3e-30 137.1 91 69.2
Lalb_Chr11g0072331 Lupinus albus HOM05D004186 ORTHO05D006965 1.8e-30 136.7 87 71.3
Aqoxy7G03142 Aquilegia oxysepala HOM05D004186 ORTHO05D006965 2.3e-30 136.3 84 75.0
AL8G33680 Arabidopsis lyrata HOM05D004186 ORTHO05D006965 3.0e-30 136.0 85 72.9
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 3.0e-30 136.0 85 72.9
Prupe.1G091900 Prunus persica HOM05D004186 ORTHO05D006965 3.0e-30 136.0 92 72.8
Thecc.10G167400 Theobroma cacao HOM05D004186 ORTHO05D006965 3.0e-30 136.0 86 72.1
Manes.02G134800 Manihot esculenta HOM05D004186 ORTHO05D006965 3.9e-30 135.6 86 74.4
Zm00001eb330180 Zea mays HOM05D004186 ORTHO05D006965 3.9e-30 135.6 91 68.1
CANSAT11G0657 Cannabis sativa HOM05D004186 ORTHO05D006965 5.1e-30 135.2 91 69.2
Lj9A689G39 Lonicera japonica HOM05D004186 ORTHO05D006965 5.1e-30 135.2 91 69.2
Zm00001eb111020 Zea mays HOM05D004186 ORTHO05D006965 5.1e-30 135.2 86 70.9
GSVIVG01029114001 Vitis vinifera HOM05D004186 ORTHO05D006965 6.7e-30 134.8 86 73.3
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea HOM05D004186 ORTHO05D015971 8.7e-30 134.4 85 71.8
Cpa.g.sc75.2 Carica papaya HOM05D004186 ORTHO05D006965 8.7e-30 134.4 86 68.6
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 1.1e-29 134.0 85 70.6
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 1.1e-29 134.0 85 70.6
CSS0041373 Camellia sinensis var. sinensis HOM05D004186 ORTHO05D006965 1.1e-29 134.0 91 69.2
Haze_22131 Corylus avellana HOM05D004186 ORTHO05D006965 1.1e-29 134.0 114 60.5
PSO782G1691 Papaver somniferum HOM05D004186 ORTHO05D006965 1.1e-29 134.0 85 74.1
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 1.1e-29 134.0 85 71.8
HPP92_013702 Vanilla planifolia HOM05D004186 ORTHO05D006965 1.1e-29 134.0 86 68.6
Aa31LG3G13490 Aethionema arabicum HOM05D004186 ORTHO05D006965 1.9e-29 133.3 77 77.9
ATR0580G261 Amborella trichopoda HOM05D004186 ORTHO05D006965 2.5e-29 132.9 86 69.8
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 2.5e-29 132.9 80 72.5
Eucgr.G01193 Eucalyptus grandis HOM05D004186 ORTHO05D006965 2.5e-29 132.9 84 73.8
RhsimUnG0079700 Rhododendron simsii HOM05D004186 ORTHO05D006965 2.5e-29 132.9 91 68.1
CDE04G0897 Ceratophyllum demersum HOM05D004186 ORTHO05D006965 3.3e-29 132.5 91 70.3
Lj4g0000380 Lotus japonicus HOM05D004186 ORTHO05D006965 3.3e-29 132.5 91 69.2
Atru.chr7.741 Acer truncatum HOM05D004186 ORTHO05D006965 4.3e-29 132.1 84 71.4
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea HOM05D004186 ORTHO05D015971 4.3e-29 132.1 85 70.6
MSTRG.19694 Avicennia marina HOM05D004186 ORTHO05D006965 4.3e-29 132.1 86 69.8
Ca_21198_v3 Cicer arietinum L. HOM05D004186 ORTHO05D006965 4.3e-29 132.1 75 78.7
Duzib128G0608 Durio zibethinus HOM05D004186 ORTHO05D006965 4.3e-29 132.1 80 75.0
Rhsim01G0008400 Rhododendron simsii HOM05D004186 ORTHO05D006965 4.3e-29 132.1 97 67.0
Actinidia04122 Actinidia chinensis HOM05D004186 ORTHO05D006965 5.7e-29 131.7 93 69.9
HanXRQChr05g0136751 Helianthus annuus HOM05D004186 ORTHO05D006965 5.7e-29 131.7 88 71.6
BcaB08g36123 Brassica carinata HOM05D004186 ORTHO05D006965 7.4e-29 131.3 85 70.6
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea HOM05D004186 ORTHO05D006965 9.7e-29 131.0 80 73.8
CiPaw.07G189100 Carya illinoinensis HOM05D004186 ORTHO05D006965 9.7e-29 131.0 85 70.6
Ciclev10008154m.g Citrus clementina HOM05D004186 ORTHO05D006965 9.7e-29 131.0 91 68.1
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 2.2e-28 129.8 93 67.7
Cpa.g.sc95.75 Carica papaya HOM05D004186 ORTHO05D006965 2.8e-28 129.4 86 68.6
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 3.7e-28 129.0 85 69.4
CAN.G584.24 Capsicum annuum HOM05D004186 ORTHO05D006965 3.7e-28 129.0 65 86.2
Lsat_1_v5_gn_8_66460 Lactuca sativa HOM05D004186 ORTHO05D006965 3.7e-28 129.0 86 70.9
Psat0ss9363g0320 Pisum sativum HOM05D004186 ORTHO05D006965 4.8e-28 128.6 85 70.6
Medtr4g128840 Medicago truncatula HOM05D004186 ORTHO05D006965 6.3e-28 128.3 80 72.5
Glyma.17G066200 Glycine max HOM05D004186 ORTHO05D006965 8.2e-28 127.9 80 73.8
Sc08g0005470 Simmondsia chinensis HOM05D004186 ORTHO05D006965 8.2e-28 127.9 85 69.4
TPR.G5301 Trifolium pratense HOM05D004186 ORTHO05D006965 1.1e-27 127.5 79 73.4
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea HOM05D004186 ORTHO05D006965 1.4e-27 127.1 80 72.5
Peaxi162Scf00942g00127 Petunia axillaris HOM05D004186 ORTHO05D006965 3.1e-27 125.9 85 69.4
Phvul.003G148700 Phaseolus vulgaris HOM05D004186 ORTHO05D006965 6.9e-27 124.8 80 72.5
Oeu052240.1 Olea europaea HOM05D004186 ORTHO05D006965 9.0e-27 124.4 90 65.6
Ah.14g083970 Amaranthus hybridus HOM05D004186 ORTHO05D006965 1.2e-26 124.0 88 70.5
Hund09010 Selenicereus undatus HOM05D004186 ORTHO05D006965 1.2e-26 124.0 84 71.4
VMungo1215G1034 Vigna mungo HOM05D004186 ORTHO05D006965 1.2e-26 124.0 80 72.5
SEGI_37950 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 1.5e-26 123.6 69 76.8
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea HOM05D004186 ORTHO05D006965 3.4e-26 122.5 74 75.7
Gohir.D06G185466 Gossypium hirsutum HOM05D004186 ORTHO05D006965 7.7e-26 121.3 77 71.4
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea HOM05D004186 ORTHO05D006965 1.3e-25 120.6 73 75.3
EL10Ac8g18262 Beta vulgaris HOM05D004186 ORTHO05D006965 2.9e-25 119.4 86 69.8
AUR62039990 Chenopodium quinoa HOM05D004186 ORTHO05D006965 3.8e-25 119.0 91 64.8
AUR62040296 Chenopodium quinoa HOM05D004186 ORTHO05D006965 3.8e-25 119.0 91 64.8
vmacro13097 Vaccinium macrocarpon HOM05D004186 ORTHO05D006965 5.0e-25 118.6 77 71.4
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 2.5e-24 116.3 93 63.4
Gorai.010G217000 Gossypium raimondii HOM05D004186 ORTHO05D006965 3.2e-24 115.9 77 70.1
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 1.6e-23 113.6 93 62.4
SMO259G0020 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 2.1e-23 113.2 76 67.1
Mapoly0030s0071 Marchantia polymorpha HOM05D004186 ORTHO05D006965 2.7e-23 112.8 69 69.6
Pp3c6_6020 Physcomitrium patens HOM05D004186 ORTHO05D006965 3.0e-22 109.4 86 60.5
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis HOM05D004186 ORTHO05D006965 5.1e-22 108.6 79 64.6
Gohir.A06G175800 Gossypium hirsutum HOM05D004186 ORTHO05D006965 2.8e-20 102.8 77 64.9
Rhsim01G0008600 Rhododendron simsii HOM05D004186 ORTHO05D015971 1.1e-16 90.9 54 75.9
RhsimUnG0079500 Rhododendron simsii HOM05D004186 ORTHO05D015971 1.1e-16 90.9 54 75.9
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 1.6e-15 87.0 62 66.1
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 1.6e-15 87.0 62 66.1
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 1.1e-13 80.9 67 61.2
MBI14_g39543_MAGBIO Magnolia biondii HOM05D004186 ORTHO05D006965 3.3e-13 79.3 87 47.1
PRCOL_00002845 Prasinoderma coloniale HOM05D004186 ORTHO05D006965 1.7e-12 77.0 107 36.4
unitig_26.g9078 Utricularia gibba HOM05D004186 ORTHO05D006965 8.2e-12 74.7 72 51.4
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 2.4e-11 73.2 57 61.4
Hund26412 Selenicereus undatus HOM05D004186 ORTHO05D006965 3.1e-11 72.8 86 47.7
SGA_v2.0_scaffold66G22476 Striga asiatica HOM05D004186 ORTHO05D405288 1.6e-07 60.5 34 85.3


User provided reference genes

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