Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 0.0e+00 1501.1 821 100.0
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 1.2e-134 485.0 995 41.4
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 4.5e-86 323.6 910 36.6
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 9.5e-84 315.8 989 36.0
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 1.4e-82 312.0 659 41.9
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 1.8e-82 311.6 1035 34.3
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 3.0e-82 310.8 991 35.9
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 5.2e-82 310.1 928 35.2
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 8.3e-80 302.8 912 34.2
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 3.8e-77 293.9 1040 33.9
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 4.7e-75 287.0 687 41.8
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 1.5e-73 282.0 970 32.8
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 1.2e-70 272.3 814 35.0
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 2.0e-70 271.6 958 33.4
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 4.7e-67 260.4 949 33.2
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 4.4e-65 253.8 753 36.1
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 5.4e-63 246.9 955 33.5
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 6.6e-61 240.0 944 30.5
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 1.1e-60 239.2 874 33.5
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 1.9e-60 238.4 1006 31.7
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 2.8e-59 234.6 956 30.5
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 2.9e-56 224.6 912 31.4
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 4.9e-56 223.8 872 30.0
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 1.2e-54 219.2 841 33.5
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 3.5e-54 217.6 808 31.1
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.1e-52 212.6 704 35.2
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 2.8e-51 208.0 993 29.9
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 1.2e-49 202.6 1000 27.5
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 2.6e-49 201.4 965 30.2
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 6.4e-48 196.8 913 29.7
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 1.1e-47 196.1 949 30.1
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 1.2e-46 192.6 1050 27.9
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 6.0e-46 190.3 959 28.1
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 6.0e-46 190.3 911 29.5
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 3.0e-45 188.0 926 29.2
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 5.6e-44 183.7 1017 28.2
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 1.6e-43 182.2 978 30.1
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 3.6e-43 181.0 789 29.7
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 6.2e-43 180.3 928 29.0
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.0e-41 175.3 949 30.3
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 5.8e-41 173.7 921 29.5
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 7.6e-41 173.3 785 32.5
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 3.2e-39 167.9 948 30.1
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 1.6e-38 165.6 822 28.2
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 2.7e-38 164.9 942 28.0
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 4.6e-38 164.1 919 30.4
CSS0039023 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 7.8e-38 163.3 457 31.9
CSS0014816 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 1.7e-37 162.2 460 31.7
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 3.9e-37 161.0 930 26.6
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 5.1e-37 160.6 868 28.2
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 6.6e-37 160.2 921 29.8
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 8.7e-37 159.8 823 29.4
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.5e-36 159.1 895 28.5
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 4.3e-36 157.5 855 28.2
CSS0019085 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 6.9e-34 150.2 441 33.3
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 1.5e-33 149.1 763 26.6
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 9.9e-33 146.4 820 29.3
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 1.7e-32 145.6 861 27.9
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 1.9e-31 142.1 870 25.9
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 3.2e-31 141.4 814 30.0
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 3.2e-31 141.4 817 27.9
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 1.2e-30 139.4 703 31.4
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 6.7e-29 133.7 432 31.9
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 9.6e-28 129.8 790 28.7
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 9.6e-28 129.8 647 29.5
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 1.4e-26 125.9 675 30.7
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 1.8e-26 125.6 432 34.7
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 4.0e-26 124.4 785 26.5
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 9.0e-26 123.2 492 32.3
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 1.5e-25 122.5 891 26.3
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 3.8e-24 117.9 652 29.8
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 6.4e-24 117.1 514 33.7
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 1.1e-23 116.3 925 25.6
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 1.9e-23 115.5 488 33.4
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 3.2e-23 114.8 896 27.0
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 9.3e-23 113.2 633 31.8
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 1.2e-22 112.8 419 37.5
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 2.7e-22 111.7 862 28.7
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 2.7e-22 111.7 654 27.8
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 8.7e-21 106.7 772 26.8
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 3.3e-20 104.8 614 28.5
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 7.4e-20 103.6 534 33.3
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 8.2e-19 100.1 682 27.9
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 1.8e-18 99.0 374 34.2
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 6.9e-18 97.1 229 40.6
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 1.2e-17 96.3 646 26.6
CSS0016721 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 3.4e-17 94.7 303 35.0
CSS0038644 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 3.4e-17 94.7 303 35.0
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 1.1e-15 89.7 513 30.6
Dinv42333 Davidia involucrata HOM05D006920 ORTHO05D005895 3.2e-15 88.2 73 58.9
AUR62033943 Chenopodium quinoa HOM05D036879 ORTHO05D005895 9.3e-15 86.7 432 30.1
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 1.6e-14 85.9 421 27.8
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 3.5e-14 84.7 599 27.9
CSS0027095 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 6.0e-14 84.0 185 36.2
Ca_12179_v3 Cicer arietinum L. HOM05D006920 ORTHO05D005895 7.9e-14 83.6 720 25.0
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 7.9e-14 83.6 76 56.6
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 1.0e-13 83.2 830 24.9
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 1.3e-13 82.8 925 26.5
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 6.7e-13 80.5 95 63.2
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 1.9e-12 79.0 62 59.7
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 2.5e-12 78.6 387 30.2
AUR62029046 Chenopodium quinoa HOM05D036879 ORTHO05D005895 1.3e-11 76.3 247 32.8
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 2.1e-11 75.5 584 27.7
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 2.1e-11 75.5 102 52.0
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 8.2e-11 73.6 652 27.5
Mapoly0131s0021 Marchantia polymorpha HOM05D006920 ORTHO05D005895 8.2e-11 73.6 167 34.1
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 1.8e-10 72.4 594 27.9
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 1.8e-10 72.4 594 27.9
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 1.8e-10 72.4 594 27.9
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 2.4e-10 72.0 383 27.4
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 2.4e-10 72.0 663 27.0
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 3.1e-10 71.6 565 31.7
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 2.0e-09 68.9 486 32.5
Pp3c19_22680 Physcomitrium patens HOM05D006920 ORTHO05D005895 2.0e-09 68.9 95 45.3
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 5.9e-09 67.4 570 25.8
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 7.6e-09 67.0 500 24.6
Eucgr.C01628 Eucalyptus grandis HOM05D006920 ORTHO05D005895 7.6e-09 67.0 242 28.1
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 8.5e-08 63.5 597 25.1
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 1.1e-07 63.2 738 27.2
Cpa.g.sc28.161 Carica papaya HOM05D006920 ORTHO05D005895 1.9e-07 62.4 346 24.9
Medtr3g053340 Medicago truncatula HOM05D006920 ORTHO05D005895 3.2e-07 61.6 891 25.4
Zm00001eb160100 Zea mays HOM05D006920 ORTHO05D005895 9.3e-07 60.1 301 34.6
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 1.6e-06 59.3 78 43.6
A10p14250 Brassica napus HOM05D010535 ORTHO05D005895 2.7e-06 58.5 50 58.0
BraA10t43516Z Brassica rapa HOM05D010535 ORTHO05D005895 2.7e-06 58.5 50 58.0
Hma1.2p1_1540F.1_g289660 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 7.9e-06 57.0 145 43.4


User provided reference genes

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