Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 0.0e+00 1125.5 559 100.0
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 1.8e-211 739.6 566 66.8
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.2e-210 736.9 552 67.9
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 2.4e-208 729.2 558 66.3
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 1.3e-206 723.4 549 67.2
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 3.0e-206 722.2 558 66.3
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 7.6e-202 707.6 523 68.6
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 1.8e-198 696.4 543 65.6
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 3.0e-198 695.7 552 64.7
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 3.3e-197 692.2 555 64.5
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 5.6e-197 691.4 540 65.6
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 2.8e-196 689.1 552 64.1
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 2.4e-192 676.0 543 65.4
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 3.5e-191 672.2 601 60.6
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 9.6e-189 664.1 556 62.9
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.1e-187 660.6 520 64.8
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 4.5e-186 655.2 596 60.6
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 3.2e-184 649.0 543 62.8
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 6.0e-183 644.8 545 62.6
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 8.7e-182 641.0 541 62.3
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 1.9e-181 639.8 532 62.2
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 2.2e-180 636.3 543 61.9
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 6.3e-180 634.8 566 57.4
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 4.1e-179 632.1 551 61.0
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 4.5e-178 628.6 539 59.9
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 5.9e-178 628.2 545 60.9
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 1.9e-176 623.2 537 61.6
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 9.4e-176 620.9 544 59.7
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 1.2e-175 620.5 504 64.9
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 6.1e-175 618.2 546 60.3
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 1.0e-174 617.5 560 60.9
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 2.3e-174 616.3 540 60.0
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 6.7e-174 614.8 548 59.7
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 2.5e-173 612.8 546 59.9
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 3.3e-173 612.5 570 60.4
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 5.7e-173 611.7 549 59.7
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 3.7e-172 609.0 534 59.0
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 3.1e-171 605.9 548 57.8
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 6.9e-171 604.7 554 56.5
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 9.1e-171 604.4 524 60.5
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 1.5e-170 603.6 552 58.7
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 1.5e-170 603.6 577 56.2
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 2.9e-169 599.4 467 66.4
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 6.5e-169 598.2 550 58.7
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 4.2e-168 595.5 550 57.5
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 7.2e-168 594.7 558 57.5
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 7.2e-168 594.7 551 59.0
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 1.6e-167 593.6 546 58.6
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 1.8e-166 590.1 572 55.2
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 8.8e-166 587.8 540 58.3
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 4.4e-165 585.5 562 56.8
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 5.7e-165 585.1 533 57.4
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 1.7e-164 583.6 532 58.3
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 1.7e-164 583.6 420 69.3
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 1.2e-162 577.4 535 57.6
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 2.0e-162 576.6 547 56.1
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 4.5e-162 575.5 481 62.6
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.7e-161 573.5 541 57.3
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 3.8e-161 572.4 544 55.7
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 6.5e-161 571.6 534 56.4
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 8.5e-161 571.2 613 53.7
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 1.9e-160 570.1 540 56.5
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 3.9e-158 562.4 539 57.0
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 6.7e-158 561.6 556 55.0
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 1.4e-155 553.9 545 56.5
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 2.4e-155 553.1 545 56.5
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 5.3e-155 552.0 542 56.5
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.6e-154 550.4 530 55.8
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 2.0e-154 550.1 540 55.9
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 1.3e-153 547.4 562 54.1
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 5.0e-153 545.4 540 54.6
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 8.5e-153 544.7 540 55.0
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 5.5e-152 542.0 465 60.4
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 4.7e-151 538.9 540 54.6
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.0e-150 537.7 540 54.8
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.4e-150 537.3 540 54.3
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 8.8e-150 534.6 539 54.9
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 3.3e-149 532.7 539 54.7
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 3.3e-149 532.7 539 54.7
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 4.4e-149 532.3 535 55.1
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 1.7e-148 530.4 531 54.8
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 8.3e-148 528.1 542 54.6
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 1.8e-147 526.9 539 54.7
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 1.2e-146 524.2 447 62.6
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 4.5e-146 522.3 509 56.6
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 1.4e-142 510.8 559 52.1
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.8e-142 510.4 537 53.6
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 3.0e-142 509.6 553 51.7
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 5.2e-142 508.8 568 51.2
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.8e-140 503.1 540 52.6
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 8.3e-140 501.5 555 50.6
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 2.5e-136 490.0 395 66.8
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 5.2e-134 482.3 539 51.0
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 4.0e-126 456.1 343 67.9
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 9.8e-125 451.4 387 61.0
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 3.2e-123 446.4 537 46.2
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.0e-121 439.9 254 81.5
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 1.1e-120 438.0 553 42.7
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 5.2e-118 429.1 536 43.1
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 2.1e-111 407.1 255 75.7
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 6.8e-110 402.1 464 51.3
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 4.3e-104 382.9 311 63.3
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 4.7e-103 379.4 427 51.1
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 9.9e-93 345.1 211 77.7
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 2.5e-88 330.5 280 55.4
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 1.6e-87 327.8 236 66.9
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 1.8e-81 307.8 462 37.4
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 6.0e-74 282.7 246 60.2
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 9.7e-56 222.2 168 66.7
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 4.8e-55 219.9 233 54.5
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 1.4e-54 218.4 263 41.8
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 9.4e-51 205.7 503 30.8
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 6.5e-44 183.0 268 42.5
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 9.1e-38 162.5 180 50.6
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 1.1e-35 155.6 197 45.2
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 4.7e-34 150.2 232 43.1
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.4e-30 137.9 266 36.8
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 2.4e-30 137.9 220 40.9
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 4.1e-30 137.1 106 67.0
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.0e-28 132.5 132 53.8
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 4.4e-24 117.1 313 28.8
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 7.7e-21 106.3 181 39.8
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 1.7e-20 105.1 165 41.2
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 2.9e-20 104.4 149 43.6
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 1.1e-19 102.4 161 41.0
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 3.6e-18 97.4 48 91.7
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 4.0e-17 94.0 101 46.5
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 6.8e-17 93.2 168 39.3
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 1.8e-14 85.1 65 63.1
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 4.1e-14 84.0 44 86.4
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.6e-10 72.0 111 38.7
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 4.0e-09 67.4 38 81.6


User provided reference genes

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