Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G1207 Trochodendron aralioides HOM05D000032 ORTHO05D006669 6.9e-128 460.7 238 100.0
TAR628G0705 Trochodendron aralioides HOM05D000032 ORTHO05D006669 1.2e-68 263.8 282 58.9
Nn5g30744 Nelumbo nucifera HOM05D000032 ORTHO05D006669 3.6e-60 235.7 283 53.0
Haze_22652 Corylus avellana HOM05D000032 ORTHO05D006669 1.7e-49 200.3 262 51.9
CSS0021497 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D006669 4.9e-49 198.7 297 45.8
Dinv15073 Davidia involucrata HOM05D000032 ORTHO05D006669 6.4e-49 198.4 294 47.6
CSS0023183 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D006669 1.4e-48 197.2 297 46.1
Dinv39530 Davidia involucrata HOM05D000032 ORTHO05D006669 1.9e-48 196.8 292 47.9
GSVIVG01009935001 Vitis vinifera HOM05D000032 ORTHO05D006669 3.2e-48 196.1 293 46.4
Sc15g0004880 Simmondsia chinensis HOM05D000032 ORTHO05D006669 1.0e-46 191.0 285 45.6
Sed0016675 Sechium edule HOM05D000032 ORTHO05D006669 2.3e-46 189.9 303 45.9
Ciclev10000409m.g Citrus clementina HOM05D000032 ORTHO05D006669 3.0e-46 189.5 296 44.9
Hma1.2p1_0274F.1_g110360 Hydrangea macrophylla HOM05D000032 ORTHO05D006669 8.6e-46 188.0 307 44.3
Cpa.g.sc29.167 Carica papaya HOM05D000032 ORTHO05D006669 1.5e-45 187.2 261 49.0
Hma1.2p1_0274F.1_g110370 Hydrangea macrophylla HOM05D000032 ORTHO05D006669 2.5e-45 186.4 285 45.6
Hund01599 Selenicereus undatus HOM05D000032 ORTHO05D006669 2.5e-45 186.4 293 43.0
Aqoxy7G02510 Aquilegia oxysepala HOM05D000032 ORTHO05D006669 5.6e-45 185.3 267 47.2
Prupe.1G363600 Prunus persica HOM05D000032 ORTHO05D006669 9.5e-45 184.5 266 48.1
Sabra05G0186800 Salix brachista HOM05D000032 ORTHO05D006669 9.5e-45 184.5 303 43.2
Atru.chr11.1620 Acer truncatum HOM05D000032 ORTHO05D006669 1.2e-44 184.1 301 44.2
Atru.chr13.268 Acer truncatum HOM05D000032 ORTHO05D006669 3.6e-44 182.6 265 47.5
CDE02G3483 Ceratophyllum demersum HOM05D000032 ORTHO05D006669 8.1e-44 181.4 275 42.5
Manes.18G012300 Manihot esculenta HOM05D000032 ORTHO05D006669 1.1e-43 181.0 265 46.8
Potri.005G241300 Populus trichocarpa HOM05D000032 ORTHO05D006669 1.4e-43 180.6 303 43.6
Lj1C1148G8 Lonicera japonica HOM05D000032 ORTHO05D006669 1.8e-43 180.3 280 45.4
FvH4_2g38260 Fragaria vesca HOM05D000032 ORTHO05D006669 1.2e-42 177.6 262 45.4
RcHm_v2.0_Chr6g0303111 Rosa chinensis HOM05D000032 ORTHO05D006669 1.5e-42 177.2 267 45.3
FAN20G2235 Fragaria x ananassa HOM05D000032 ORTHO05D006669 2.6e-42 176.4 262 45.0
FAN27G2308 Fragaria x ananassa HOM05D000032 ORTHO05D006669 2.6e-42 176.4 262 45.0
ClCG09G010550 Citrullus lanatus HOM05D000032 ORTHO05D006669 5.8e-42 175.3 270 46.3
ECA240G2120 Erigeron canadensis HOM05D000032 ORTHO05D006669 7.5e-42 174.9 309 42.1
FAN15G3432 Fragaria x ananassa HOM05D000032 ORTHO05D006669 7.5e-42 174.9 262 44.7
Glyma.18G101600 Glycine max HOM05D000032 ORTHO05D006669 7.5e-42 174.9 261 46.0
Thecc.08G046400 Theobroma cacao HOM05D000032 ORTHO05D006669 7.5e-42 174.9 303 42.6
HanXRQChr16g0529991 Helianthus annuus HOM05D000032 ORTHO05D006669 2.2e-41 173.3 310 40.3
VMungo0540G0072 Vigna mungo HOM05D000032 ORTHO05D006669 2.2e-41 173.3 270 45.9
Duzib093G1385 Durio zibethinus HOM05D000032 ORTHO05D006669 2.9e-41 172.9 298 42.3
Eucgr.A00214 Eucalyptus grandis HOM05D000032 ORTHO05D006669 4.9e-41 172.2 263 45.2
HanXRQChr13g0412281 Helianthus annuus HOM05D000032 ORTHO05D006669 4.9e-41 172.2 307 41.4
Phvul.006G039100 Phaseolus vulgaris HOM05D000032 ORTHO05D006669 8.3e-41 171.4 269 44.6
Glyma.08G313100 Glycine max HOM05D000032 ORTHO05D006669 1.9e-40 170.2 263 44.9
MD15G1442700 Malus domestica HOM05D000032 ORTHO05D006669 1.9e-40 170.2 274 44.9
ECA238G1643 Erigeron canadensis HOM05D000032 ORTHO05D006669 5.4e-40 168.7 293 42.0
AUR62040549 Chenopodium quinoa HOM05D000032 ORTHO05D006669 7.1e-40 168.3 223 48.9
TWI36G0775 Tripterygium wilfordii HOM05D000032 ORTHO05D006669 7.1e-40 168.3 268 43.7
Gohir.A05G185800 Gossypium hirsutum HOM05D000032 ORTHO05D006669 1.6e-39 167.2 259 44.8
CsaV3_3G045070 Cucumis sativus L. HOM05D000032 ORTHO05D006669 2.1e-39 166.8 271 45.0
MELO3C003842.2 Cucumis melo HOM05D000032 ORTHO05D006669 2.7e-39 166.4 270 45.2
Gorai.009G193900 Gossypium raimondii HOM05D000032 ORTHO05D006669 2.7e-39 166.4 262 44.7
TWI56G0435 Tripterygium wilfordii HOM05D000032 ORTHO05D006669 2.7e-39 166.4 263 44.1
Peaxi162Scf00553g00813 Petunia axillaris HOM05D000032 ORTHO05D006669 4.6e-39 165.6 306 41.2
Medtr3g049990 Medicago truncatula HOM05D000032 ORTHO05D006669 6.0e-39 165.2 271 43.2
Gohir.D05G188600 Gossypium hirsutum HOM05D000032 ORTHO05D006669 7.8e-39 164.9 262 44.3
Lalb_Chr20g0113951 Lupinus albus HOM05D000032 ORTHO05D006669 7.8e-39 164.9 267 44.9
Rhsim06G0019900 Rhododendron simsii HOM05D000032 ORTHO05D006669 7.8e-39 164.9 307 41.7
PGSC0003DMG400009873 Solanum tuberosum HOM05D000032 ORTHO05D006669 1.0e-38 164.5 309 40.5
CANSAT64G1040 Cannabis sativa HOM05D000032 ORTHO05D006669 2.3e-38 163.3 272 44.1
MBI05_g23391_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D006669 3.0e-38 162.9 290 41.7
ATR0090G023 Amborella trichopoda HOM05D000032 ORTHO05D006669 3.9e-38 162.5 260 43.8
Solyc04g081580.4 Solanum lycopersicum HOM05D000032 ORTHO05D006669 3.9e-38 162.5 308 40.3
arahy.Tifrunner.gnm1.ann1.CZI2M2 Arachis hypogaea HOM05D000032 ORTHO05D006669 6.6e-38 161.8 271 43.2
unitig_32.g11227 Utricularia gibba HOM05D000032 ORTHO05D006669 1.5e-37 160.6 304 39.1
Sopen04g035190 Solanum pennellii HOM05D000032 ORTHO05D006669 1.9e-37 160.2 308 39.9
arahy.Tifrunner.gnm1.ann1.KG3JNQ Arachis hypogaea HOM05D000032 ORTHO05D006669 3.3e-37 159.5 278 42.4
Medtr2g041140 Medicago truncatula HOM05D000032 ORTHO05D006669 3.3e-37 159.5 275 42.2
SGA_v2.0_scaffold92G28212 Striga asiatica HOM05D000032 ORTHO05D006669 4.3e-37 159.1 270 41.1
THA.LOC104815496 Tarenaya hassleriana HOM05D000032 ORTHO05D006669 5.6e-37 158.7 279 41.6
DCAR_023755 Daucus carota HOM05D000032 ORTHO05D006669 7.3e-37 158.3 265 41.1
EL10Ac1g02170 Beta vulgaris HOM05D000032 ORTHO05D006669 2.1e-36 156.8 290 40.3
AUR62041487 Chenopodium quinoa HOM05D000032 ORTHO05D006669 1.4e-35 154.1 285 40.4
QL02p011979 Quercus lobata HOM05D000032 ORTHO05D006669 1.4e-35 154.1 262 42.0
QL12p004290 Quercus lobata HOM05D000032 ORTHO05D006669 4.0e-35 152.5 263 42.6
Lj6g0002233 Lotus japonicus HOM05D000032 ORTHO05D006669 1.5e-34 150.6 316 38.3
HPP92_018598 Vanilla planifolia HOM05D000032 ORTHO05D006669 2.0e-34 150.2 319 37.6
ECA240G3517 Erigeron canadensis HOM05D000032 ORTHO05D006669 4.4e-34 149.1 220 48.6
BcaC07g38004 Brassica carinata HOM05D000032 ORTHO05D006669 9.9e-34 147.9 271 41.3
BolC8t48384H Brassica oleracea HOM05D000032 ORTHO05D006669 1.3e-33 147.5 272 41.2
BraA08t33251Z Brassica rapa HOM05D000032 ORTHO05D006669 1.3e-33 147.5 272 41.2
A08p12610 Brassica napus HOM05D000032 ORTHO05D006669 1.7e-33 147.1 273 41.0
Sp7g15250 Schrenkiella parvula HOM05D000032 ORTHO05D006669 2.2e-33 146.7 265 41.5
Aa31LG2G12780 Aethionema arabicum HOM05D000032 ORTHO05D006669 3.8e-33 146.0 272 40.8
PGR042G0181 Punica granatum HOM05D000032 ORTHO05D006669 8.4e-33 144.8 261 41.8
PSO675G8850 Papaver somniferum HOM05D000032 ORTHO05D006669 1.4e-32 144.1 276 40.6
Lj6g0027027 Lotus japonicus HOM05D000032 ORTHO05D006669 1.9e-32 143.7 291 38.8
Nitab4.5_0005970g0030 Nicotiana tabacum HOM05D000032 ORTHO05D006669 2.4e-32 143.3 302 38.1
Psat5g176240 Pisum sativum HOM05D000032 ORTHO05D006669 2.4e-32 143.3 271 40.6
Ca_14808_v3 Cicer arietinum L. HOM05D000032 ORTHO05D006669 3.2e-32 142.9 266 40.2
Ah.00g000290 Amaranthus hybridus HOM05D000032 ORTHO05D006669 4.2e-32 142.5 311 36.3
Oeu007360.3 Olea europaea HOM05D000032 ORTHO05D006669 5.4e-32 142.1 305 36.4
AL7G38120 Arabidopsis lyrata HOM05D000032 ORTHO05D006669 7.1e-32 141.7 275 40.7
Lsat_1_v5_gn_8_10200 Lactuca sativa HOM05D000032 ORTHO05D006669 1.2e-31 141.0 349 34.4
MSTRG.25259 Avicennia marina HOM05D000032 ORTHO05D006669 1.6e-31 140.6 304 37.2
PSO541G2252 Papaver somniferum HOM05D000032 ORTHO05D006669 2.7e-31 139.8 276 40.2
AT4G16630 Arabidopsis thaliana HOM05D000032 ORTHO05D006669 3.5e-31 139.4 270 40.0
Carub.0007s2477 Capsella rubella HOM05D000032 ORTHO05D006669 4.6e-31 139.0 281 40.2
Cc00_g14370 Coffea canephora HOM05D000032 ORTHO05D006669 4.6e-31 139.0 326 36.8
CAN.G311.43 Capsicum annuum HOM05D000032 ORTHO05D006669 1.0e-30 137.9 308 37.0
Migut.C00853 Erythranthe guttata HOM05D000032 ORTHO05D006669 1.0e-30 137.9 312 35.6
Thhalv10024452m.g Eutrema salsugineum HOM05D000032 ORTHO05D006669 1.0e-30 137.9 268 39.9
CARHR223130 Cardamine hirsuta HOM05D000032 ORTHO05D006669 1.3e-30 137.5 269 40.5
BraA01t01995Z Brassica rapa HOM05D000032 ORTHO05D006669 3.9e-30 136.0 278 37.4
SHI08056 Sapria himalayana HOM05D000032 ORTHO05D006669 6.6e-30 135.2 292 37.3
BcaB07g32127 Brassica carinata HOM05D000032 ORTHO05D006669 1.5e-29 134.0 269 39.0
Prupe.3G157600 Prunus persica HOM05D000032 ORTHO05D006669 4.3e-29 132.5 338 34.9
COL.COLO4_26129 Corchorus olitorius HOM05D000032 ORTHO05D006669 5.6e-29 132.1 247 41.3
A01p20760 Brassica napus HOM05D000032 ORTHO05D006669 7.3e-29 131.7 275 37.5
Zm00001eb102610 Zea mays HOM05D000032 ORTHO05D006669 9.6e-29 131.3 305 37.4
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 6.2e-28 128.6 271 41.0
MD01G1061100 Malus domestica HOM05D000032 ORTHO05D006669 8.1e-28 128.3 335 36.1
TPR.G11499 Trifolium pratense HOM05D000032 ORTHO05D006669 1.4e-27 127.5 271 37.3
Zm00001eb318210 Zea mays HOM05D000032 ORTHO05D006669 1.3e-25 120.9 308 35.4
Nn5g30743 Nelumbo nucifera HOM05D000032 ORTHO05D006669 1.7e-25 120.6 115 60.9
vmacro07575 Vaccinium macrocarpon HOM05D000032 ORTHO05D006669 1.7e-25 120.6 205 42.9
BcaC05g26047 Brassica carinata HOM05D000032 ORTHO05D006669 2.9e-25 119.8 292 34.9
Os12g0481100 Oryza sativa ssp. japonica HOM05D000032 ORTHO05D006669 9.3e-24 114.8 337 33.5
arahy.Tifrunner.gnm1.ann1.GBSD9W Arachis hypogaea HOM05D000032 ORTHO05D006669 1.1e-21 107.8 134 50.0
SMO169G0064 Selaginella moellendorffii HOM05D000032 ORTHO05D006669 1.9e-21 107.1 274 33.6
CDE04G2938 Ceratophyllum demersum HOM05D000032 ORTHO05D006669 5.3e-19 99.0 62 83.9
BcaC09g50392 Brassica carinata HOM05D000032 ORTHO05D006669 9.0e-19 98.2 260 32.7
AagrBONN_evm.TU.Sc2ySwM_117.834 Anthoceros agrestis HOM05D000032 ORTHO05D006669 4.5e-18 95.9 319 29.2
Pp3c9_14310 Physcomitrium patens HOM05D000032 ORTHO05D006669 9.9e-18 94.7 198 36.4
CiPaw.07G148200 Carya illinoinensis HOM05D000032 ORTHO05D006669 1.1e-16 91.3 97 59.8
Glyma.09G101666 Glycine max HOM05D000032 ORTHO05D006669 1.1e-16 91.3 60 81.7
Actinidia15432 Actinidia chinensis HOM05D000032 ORTHO05D006669 1.2e-15 87.8 99 52.5
SEGI_11886 Sequoiadendron giganteum HOM05D000032 ORTHO05D006669 4.6e-15 85.9 59 78.0
Oeu055068.2 Olea europaea HOM05D000032 ORTHO05D006669 1.0e-14 84.7 59 81.4
Cre10.g420900 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D006669 6.7e-14 82.0 61 65.6
Mapoly0090s0088 Marchantia polymorpha HOM05D000032 ORTHO05D006669 8.7e-14 81.6 347 27.7
MCO16G119 Micromonas commoda HOM05D000032 ORTHO05D006669 2.1e-12 77.0 59 64.4
SEGI_06822 Sequoiadendron giganteum HOM05D000032 ORTHO05D006669 2.8e-12 76.6 186 33.9
PRCOL_00003854 Prasinoderma coloniale HOM05D000032 ORTHO05D006669 4.8e-12 75.9 80 47.5
CDE04G2813 Ceratophyllum demersum HOM05D000032 ORTHO05D006669 6.9e-11 72.0 72 47.2
Psat2g061120 Pisum sativum HOM05D000032 ORTHO05D006669 1.3e-09 67.8 40 85.0
Cfa022705 Carpinus fangiana HOM05D000949 ORTHO05D009975 1.2e-07 61.2 61 44.3
C01p26020 Brassica napus HOM05D002395 ORTHO05D018251 2.1e-07 60.5 125 34.4
PRCOL_00000714 Prasinoderma coloniale HOM05D000032 ORTHO05D004142 7.9e-07 58.5 58 53.4
BolC1t02546H Brassica oleracea HOM05D000032 ORTHO05D006669 1.3e-06 57.8 125 33.6
Mapoly0116s0020 Marchantia polymorpha HOM05D000032 ORTHO05D004142 5.1e-06 55.8 58 50.0


User provided reference genes

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